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Search the MarkerSeek catalogue

Find pre-computed candidate plastid markers and reference plastome collections by genus, then open the full genus report for ranked markers, primers, figures, and downloads.

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Type a genus prefix, then review matching genera directly below.

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Detailed genus table

Showing 151–200 of 297 matching genera.

Genus Family Order Species Markers Primers Genome length Top marker Action
Cicer primer-ready Fabaceae Fabales 4 16 80 125–126 kb trnN-GUU-trnR-ACG 86.3 View
Cicerbita primer-ready Asteraceae Asterales 4 16 80 153–153 kb trnG-UCC-trnT 74.6 View
Cichorium primer-ready Asteraceae Asterales 2 15 80 153–153 kb trnC-GCA-petN 67.6 View
Cinchona primer-ready Rubiaceae Gentianales 4 19 100 155–157 kb ccsA-ndhD 72.7 View
Cinnamomum primer-ready Lauraceae Laurales 31 15 75 153–159 kb rps19-rpl2 67.2 View
Circaea primer-ready Onagraceae Myrtales 7 21 105 156–156 kb trnH-GUG-psbA 70.9 View
Cirsium primer-ready Asteraceae Asterales 18 18 90 152–153 kb ndhF 79.4 View
Cissus primer-ready Vitaceae Vitales 5 17 85 158–160 kb petA-psbJ 88.4 View
Cistanthe primer-ready Montiaceae Caryophyllales 2 18 95 156–157 kb psbC-trnS-UGA 75.6 View
Citropsis primer-ready Rutaceae Sapindales 3 18 95 159–160 kb psbC-trnS-UGA 57.2 View
Citrullus primer-ready Cucurbitaceae Cucurbitales 4 18 90 157–157 kb trnG-TCC-trnR-TCT 76.9 View
Citrus primer-ready Rutaceae Sapindales 35 19 95 160–161 kb ndhK-ndhC 60.1 View
Claderia primer-ready Orchidaceae Asparagales 2 20 105 161–161 kb rpl2-rpl23 76.5 View
Cladopus primer-ready Podostemaceae Malpighiales 4 18 90 133–133 kb trnQ-UUG-trnK-UUU 79.7 View
Clausena primer-ready Rutaceae Sapindales 5 21 105 160–161 kb trnH-GUG-psbA 83.9 View
Clausia primer-ready Brassicaceae Brassicales 2 14 70 156–158 kb trnH-CAC-psbA 79.6 View
Cleisostoma primer-ready Orchidaceae Asparagales 11 19 100 147–149 kb clpP-psbB 87.7 View
Cleistogenes primer-ready Poaceae Poales 11 17 90 134–135 kb trnC-GCA-rpoB 56.7 View
Clematis primer-ready Ranunculaceae Ranunculales 160 17 85 159–160 kb infA-rps4 78.3 View
Clematoclethra primer-ready Actinidiaceae Ericales 2 19 95 157–157 kb trnI-CAU-trnH-GUG 88.3 View
Cleome primer-ready Cleomaceae Brassicales 2 15 75 158–159 kb trnT-GGU-psbD 83.8 View
Cleomella primer-ready Cleomaceae Brassicales 2 20 100 154–154 kb ndhD-psaC 80.9 View
Clerodendrum primer-ready Lamiaceae Lamiales 5 17 85 152–152 kb trnH-GUG-psbA 79.1 View
Clethra primer-ready Clethraceae Ericales 2 21 110 157–157 kb rpl16-rps3 71.0 View
Climacoptera primer-ready Amaranthaceae Caryophyllales 2 20 100 150–150 kb rpl23 87.7 View
Clinopodium primer-ready Lamiaceae Lamiales 8 17 85 151–152 kb rps16-trnQ(UUG) 81.1 View
Clitoria primer-ready Fabaceae Fabales 2 20 105 152–152 kb cemA-psaI 84.7 View
Clivia primer-ready Amaryllidaceae Asparagales 7 22 110 157–159 kb rps19-psbA 72.2 View
Cnidium primer-ready Apiaceae Apiales 2 20 100 147–151 kb trnL-CAA-ycf2 80.8 View
Cnidoscolus primer-ready Euphorbiaceae Malpighiales 2 18 95 159–159 kb rpl2-trnH-GUG 84.8 View
Coccinia primer-ready Cucurbitaceae Cucurbitales 2 18 95 122–157 kb trnK-rps16 67.9 View
Cochlearia primer-ready Brassicaceae Brassicales 4 16 85 155–155 kb rpl32-trnL 82.2 View
Codium primer-ready Codiaceae Bryopsidales 4 14 70 79–92 kb orf276 84.1 View
Codonopsis primer-ready Campanulaceae Asterales 9 16 80 169–172 kb rpl36-rps8 85.3 View
Coelastrum primer-ready Scenedesmaceae Sphaeropleales 5 19 95 170–299 kb rbcL 83.9 View
Coelogyne primer-ready Orchidaceae Asparagales 52 18 95 157–160 kb psaC-ndhE 87.6 View
Coffea primer-ready Rubiaceae Gentianales 11 22 110 155–155 kb trnH-GUG-psbA 69.1 View
Coix primer-ready Poaceae Poales 4 16 80 141–141 kb trnG-GCC 55.8 View
Cojoba primer-ready Fabaceae Fabales 2 19 95 178–179 kb trnK-UUU-rps16 83.7 View
Coleochaete primer-ready Coleochaetaceae Coleochaetales 2 14 70 107–111 kb rpl32-tRNA-Pro 80.2 View
Coleus primer-ready Lamiaceae Lamiales 4 20 100 152–153 kb ndhD-psaC 76.2 View
Collabium primer-ready Orchidaceae Asparagales 2 17 85 158–158 kb rpl32-trnL-UAG 82.7 View
Collinsonia primer-ready Lamiaceae Lamiales 3 17 90 153–153 kb trnT-UGU-trnL-UAA 68.8 View
Colobanthus primer-ready Caryophyllaceae Caryophyllales 7 19 95 151–151 kb psbT-psbN 84.9 View
Colocasia primer-ready Araceae Alismatales 4 18 90 162–163 kb trnH-psbA 67.5 View
Colquhounia primer-ready Lamiaceae Lamiales 5 15 75 152–153 kb rps16-trnQ(UUG) 70.7 View
Coluria primer-ready Rosaceae Rosales 2 20 105 155–156 kb trnK-UUU-rps16 81.9 View
Comastoma primer-ready Gentianaceae Gentianales 2 20 100 151–152 kb trnH-GUG-psbA 81.7 View
Combretum primer-ready Combretaceae Myrtales 2 20 100 154–159 kb JXY33_pgt021-JXY33_pgt022 85.7 View
Commelina primer-ready Commelinaceae Commelinales 3 19 100 160–161 kb rpl32-trnL-UAG 71.9 View

Alphabetical index

Browse genera by initial letter.

What is here

Each entry combines a deduplicated reference set (one GenBank record per species) and, when available, a MarkerSeek output drop with candidate markers, hotspot detail pages, and primer pairs.

Reference set

Per-species plastome GenBank files curated upstream. Use the genus page to inspect species, genome length and GC distribution, and download individual records.

Analysis results

Where present, candidate marker tables, primer rankings, Pi and similarity figures, hotspot detail pages with alignment viewers, and packaged downloads.