Hotspot

ycf1

SSC · 13938-19535 · 5598 bp

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Pi 0.0025
MarkerSeek score 52.00
Primer available yes
Label ycf1

Feature Metadata

Pi Curve

Haplotype Network

Species Separation

Primer Ranking

Primer ID fwd_seq rev_seq fwd_gc rev_gc fwd_tm rev_tm amplicon_size cross_species_success_rate primer_score
ycf1_p1 AGACAAATTCTGGGAAGAACCA TCGATATTGAGACCTGGACC 40.9 50.0 57.5 56.1 237 bp 1.0 46.5
ycf1_p2 TCTGGGAAGAACCAAGATTCT TCGATATTGAGACCTGGACC 42.9 50.0 56.3 56.1 229 bp 1.0 44.2
ycf1_p3 AGACAAATTCTGGGAAGAACCA ATCGATATTGAGACCTGGACC 40.9 47.6 57.5 56.7 238 bp 1.0 42.8
ycf1_p4 GACAAATTCTGGGAAGAACCA TCGATATTGAGACCTGGACC 42.9 50.0 56.1 56.1 236 bp 1.0 42.6
ycf1_p5 TTCTGGGAAGAACCAAGATTCT TCGATATTGAGACCTGGACC 40.9 50.0 57.0 56.1 230 bp 1.0 42.1