Hotspot

trnT-UGU-trnL-UAA

LSC · 47659-48943 · 1285 bp

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Pi 0.0137
MarkerSeek score 62.10
Primer available yes
Label trnT-UGU-trnL-UAA

Feature Metadata

Pi Curve

Haplotype Network

Species Separation

Primer Ranking

Primer ID fwd_seq rev_seq fwd_gc rev_gc fwd_tm rev_tm amplicon_size cross_species_success_rate primer_score
trnT-UGU-trnL-UAA_p1 AACAAATGGAAAAAGCCGGC ACCAATTTCGCCATATCCCC 45.0 50.0 58.1 58.0 717-1479 bp 1.0 84.5
trnT-UGU-trnL-UAA_p2 GCGATGCTCTAACCTCTGAG ACCAATTTCGCCATATCCCC 55.0 50.0 57.9 58.0 661-1423 bp 1.0 84.5
trnT-UGU-trnL-UAA_p3 AACAAATGGAAAAAGCCGGC TAGCGTCTACCAATTTCGCC 45.0 50.0 58.1 58.1 725-1487 bp 1.0 84.0
trnT-UGU-trnL-UAA_p4 GCGATGCTCTAACCTCTGAG TAGCGTCTACCAATTTCGCC 55.0 50.0 57.9 58.1 669-1431 bp 1.0 84.0
trnT-UGU-trnL-UAA_p5 GGAATCGAACCGATGACCAT ACCAATTTCGCCATATCCCC 50.0 50.0 57.8 58.0 693-1455 bp 1.0 83.6