Hotspot

ndhC-trnV-UAC

LSC · 49775-50642 · 868 bp

Back to Sporobolus

Pi 0.0328
MarkerSeek score 73.00
Primer available yes
Label ndhC-trnV-UAC

Feature Metadata

Pi Curve

Haplotype Network

Species Separation

Primer Ranking

Primer ID fwd_seq rev_seq fwd_gc rev_gc fwd_tm rev_tm amplicon_size cross_species_success_rate primer_score
ndhC-trnV-UAC_p1 TCATTGCCCAAGGGTAGAGA GGTTCGAATCCGTATAGCCC 50.0 55.0 58.0 57.9 757-1193 bp 1.0 88.9
ndhC-trnV-UAC_p2 TCATTGCCCAAGGGTAGAGA ATAGTGAACTCTTGCAGCGG 50.0 50.0 58.0 58.0 1079-1515 bp 1.0 88.3
ndhC-trnV-UAC_p3 AAAACTCATTGCCCAAGGGT ATAGTGAACTCTTGCAGCGG 45.0 50.0 57.9 58.0 1084-1520 bp 1.0 87.8
ndhC-trnV-UAC_p4 TGCCCAAGGGTAGAGAAAGA GGTTCGAATCCGTATAGCCC 50.0 55.0 58.0 57.9 1100-1189 bp 0.777778 78.6
ndhC-trnV-UAC_p5 TGCCCAAGGGTAGAGAAAGA ATAGTGAACTCTTGCAGCGG 50.0 50.0 58.0 58.0 1422-1511 bp 0.777778 78.2