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rpl36-rps11

LSC · 4479-4657 · 179 bp

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Pi 0.0145

MarkerSeek score 55.00

Primer available yes

Label rpl36-rps11

Feature Metadata

label_name: rpl36-rps11
feature_type: igs
region: LSC
length_bp: 179
variable_sites: 5
pi: 0.0145
unique_haplotype_count: 4
primer_available: yes
alignment_reliability: 1.00
markerseek_score: 55.00

Pi Curve

Haplotype Network

Species Separation

Primer Ranking

Primer ID	fwd_seq	rev_seq	fwd_gc	rev_gc	fwd_tm	rev_tm	amplicon_size	cross_species_success_rate	primer_score
rpl36-rps11_p1	CGTGGGCGAATTAGAGTCAT	CGCAAACCAATACGCACTTT	50.0	45.0	57.8	58.0	292-298 bp	1.0	79.2
rpl36-rps11_p2	CGTGGGCGAATTAGAGTCAT	CTACGCAAACCAATACGCAC	50.0	50.0	57.8	57.8	295-301 bp	1.0	78.3
rpl36-rps11_p3	CGTGGGCGAATTAGAGTCAT	TCTACGTGCACTCTTCCGTA	50.0	50.0	57.8	58.2	332-338 bp	1.0	77.9
rpl36-rps11_p4	CGTGGGCGAATTAGAGTCAT	TACGCAAACCAATACGCACT	50.0	45.0	57.8	58.2	294-300 bp	1.0	77.9
rpl36-rps11_p5	CGTGGGCGAATTAGAGTCAT	CGTGCACTCTTCCGTAAACT	50.0	50.0	57.8	58.2	328-334 bp	1.0	77.6