Pi
0.00386
MarkerSeek score
39.70
Primer available
yes
Label
ccsA
Feature Metadata
Pi Curve
Haplotype Network
Species Separation
Primer Ranking
| Primer ID | fwd_seq | rev_seq | fwd_gc | rev_gc | fwd_tm | rev_tm | amplicon_size | cross_species_success_rate | primer_score |
|---|---|---|---|---|---|---|---|---|---|
| ccsA_p1 | TCCCAATTTCCATTCCGTCA | TGATTCACATGGTTCTCGCC | 45.0 | 50.0 | 57.1 | 58.3 | 1086-1087 bp | 1.0 | 72.0 |
| ccsA_p2 | TCCCAATTTCCATTCCGTCA | GCCGGCTTACACGAATTTTT | 45.0 | 45.0 | 57.1 | 57.7 | 1069-1070 bp | 1.0 | 71.4 |
| ccsA_p3 | TTCCCAATTTCCATTCCGTCA | TGATTCACATGGTTCTCGCC | 42.9 | 50.0 | 57.8 | 58.3 | 1087-1088 bp | 1.0 | 69.8 |
| ccsA_p4 | TTCCCAATTTCCATTCCGTCA | GCCGGCTTACACGAATTTTT | 42.9 | 45.0 | 57.8 | 57.7 | 1070-1071 bp | 1.0 | 69.2 |
| ccsA_p5 | TCCCAATTTCCATTCCGTCAT | TGATTCACATGGTTCTCGCC | 42.9 | 50.0 | 57.6 | 58.3 | 1086-1087 bp | 1.0 | 68.0 |