Hotspot

trnT-UGU-trnL-UAA

LSC · 46515-47250 · 736 bp

Back to Salacca

Pi 0.00408
MarkerSeek score 61.10
Primer available yes
Label trnT-UGU-trnL-UAA

Feature Metadata

Pi Curve

Haplotype Network

Species Separation

Primer Ranking

Primer ID fwd_seq rev_seq fwd_gc rev_gc fwd_tm rev_tm amplicon_size cross_species_success_rate primer_score
trnT-UGU-trnL-UAA_p1 GCGATGCTCTAACCTCTGAG ACCAATTTCGCCATATCCCC 55.0 50.0 57.9 58.0 786-1184 bp 1.0 79.1
trnT-UGU-trnL-UAA_p2 GCGATGCTCTAACCTCTGAG TAGCGTCTACCAATTTCGCC 55.0 50.0 57.9 58.1 794-1192 bp 1.0 78.6
trnT-UGU-trnL-UAA_p3 GGAATCGAACCGATGACCAT ACCAATTTCGCCATATCCCC 50.0 50.0 57.8 58.0 818-1216 bp 1.0 78.3
trnT-UGU-trnL-UAA_p4 GCGATGCTCTAACCTCTGAG TTCCATACCAAGGCTCAAGC 55.0 50.0 57.9 57.9 826-1224 bp 1.0 78.1
trnT-UGU-trnL-UAA_p5 GGAATCGAACCGATGACCAT TAGCGTCTACCAATTTCGCC 50.0 50.0 57.8 58.1 826-1224 bp 1.0 77.8