Hotspot

trnT-UGU-trnL-UAA

LSC · 47322-48196 · 875 bp

Back to Rubia

Pi 0.0124
MarkerSeek score 61.00
Primer available yes
Label trnT-UGU-trnL-UAA

Feature Metadata

Pi Curve

Haplotype Network

Species Separation

Primer Ranking

Primer ID fwd_seq rev_seq fwd_gc rev_gc fwd_tm rev_tm amplicon_size cross_species_success_rate primer_score
trnT-UGU-trnL-UAA_p1 GCGATGCTCTAACCTCTGAG ACCAATTTCGCCATATCCCC 55.0 50.0 57.9 58.0 905-973 bp 1.0 85.6
trnT-UGU-trnL-UAA_p2 GCGATGCTCTAACCTCTGAG TAGCGTCTACCAATTTCGCC 55.0 50.0 57.9 58.1 913-981 bp 1.0 85.0
trnT-UGU-trnL-UAA_p3 GCGATGCTCTAACCTCTGAG GTTTCCATACCAAGGCCCAA 55.0 50.0 57.9 58.1 947-1015 bp 1.0 84.9
trnT-UGU-trnL-UAA_p4 GGAATCGAACCGATGACCAT ACCAATTTCGCCATATCCCC 50.0 50.0 57.8 58.0 937-1005 bp 1.0 84.6
trnT-UGU-trnL-UAA_p5 GCGATGCTCTAACCTCTGAG CATACCAAGGCCCAATCCAA 55.0 50.0 57.9 57.8 942-1010 bp 1.0 84.2