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trnP-UGG-psaJ

LSC · 70231-71083 · 853 bp

Back to Pterodon

Pi 0.00234

MarkerSeek score 60.10

Primer available yes

Label trnP-UGG-psaJ

Feature Metadata

label_name: trnP-UGG-psaJ
feature_type: igs
region: LSC
length_bp: 853
variable_sites: 2
pi: 0.00234
unique_haplotype_count: 2
primer_available: yes
alignment_reliability: 1.00
markerseek_score: 60.10

Pi Curve

Haplotype Network

Species Separation

Primer Ranking

Primer ID	fwd_seq	rev_seq	fwd_gc	rev_gc	fwd_tm	rev_tm	amplicon_size	cross_species_success_rate	primer_score
trnP-UGG-psaJ_p1	ACCCGTGACATTTTGTACCC	AAGCCCCGAACCATAGAGTA	50.0	50.0	58.1	57.8	972 bp	1.0	78.0
trnP-UGG-psaJ_p2	CCCGTGACATTTTGTACCCA	AAGCCCCGAACCATAGAGTA	50.0	50.0	58.1	57.8	971 bp	1.0	78.0
trnP-UGG-psaJ_p3	ACAGGATTTGAACCCGTGAC	AAGCCCCGAACCATAGAGTA	50.0	50.0	58.1	57.8	983 bp	1.0	77.9
trnP-UGG-psaJ_p4	CAGGATTTGAACCCGTGACA	AAGCCCCGAACCATAGAGTA	50.0	50.0	58.1	57.8	982 bp	1.0	77.9
trnP-UGG-psaJ_p5	TGACAGGATTTGAACCCGTG	AAGCCCCGAACCATAGAGTA	50.0	50.0	58.1	57.8	985 bp	1.0	77.9