Hotspot

trnT-UGU-trnL-UAA

LSC · 47420-48223 · 804 bp

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Pi 0.0137
MarkerSeek score 63.30
Primer available yes
Label trnT-UGU-trnL-UAA

Feature Metadata

Pi Curve

Haplotype Network

Species Separation

Primer Ranking

Primer ID fwd_seq rev_seq fwd_gc rev_gc fwd_tm rev_tm amplicon_size cross_species_success_rate primer_score
trnT-UGU-trnL-UAA_p1 GCGATGCTCTAACCTCTGAG ACCAATTTCGCCATATCCCC 55.0 50.0 57.9 58.0 854-885 bp 1.0 80.1
trnT-UGU-trnL-UAA_p2 GGAATCGAACCGATGACCAT ACCAATTTCGCCATATCCCC 50.0 50.0 57.8 58.0 886-917 bp 1.0 79.2
trnT-UGU-trnL-UAA_p3 GCGATGCTCTAACCTCTGAG ATTAAGTCCGCAGCGTCTAC 55.0 50.0 57.9 57.8 872-903 bp 1.0 78.5
trnT-UGU-trnL-UAA_p4 GGAATCGAACCGATGACCAT ATTAAGTCCGCAGCGTCTAC 50.0 50.0 57.8 57.8 904-935 bp 1.0 77.6
trnT-UGU-trnL-UAA_p5 ATGCGATGCTCTAACCTCTG ACCAATTTCGCCATATCCCC 50.0 50.0 57.5 58.0 856-887 bp 1.0 77.0