Hotspot

trnT-UGU-trnL-UAA

LSC · 48150-48955 · 806 bp

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Pi 0.0215
MarkerSeek score 68.70
Primer available yes
Label trnT-UGU-trnL-UAA

Feature Metadata

Pi Curve

Haplotype Network

Species Separation

Primer Ranking

Primer ID fwd_seq rev_seq fwd_gc rev_gc fwd_tm rev_tm amplicon_size cross_species_success_rate primer_score
trnT-UGU-trnL-UAA_p1 GCGATGCTCTAACCTCTGAG ACCAATTTCGCCATATCCCC 55.0 50.0 57.9 58.0 856-906 bp 1.0 83.6
trnT-UGU-trnL-UAA_p2 GCGATGCTCTAACCTCTGAG TAGCGTCTACCAATTTCGCC 55.0 50.0 57.9 58.1 864-914 bp 1.0 83.0
trnT-UGU-trnL-UAA_p3 ACAAATAGAACAAGCCGGCT ACCAATTTCGCCATATCCCC 45.0 50.0 57.8 58.0 911-961 bp 1.0 82.8
trnT-UGU-trnL-UAA_p4 GGAATCGAACCGATGACCAT ACCAATTTCGCCATATCCCC 50.0 50.0 57.8 58.0 888-938 bp 1.0 82.6
trnT-UGU-trnL-UAA_p5 ACAAATAGAACAAGCCGGCT TAGCGTCTACCAATTTCGCC 45.0 50.0 57.8 58.1 919-969 bp 1.0 82.2