Hotspot

trnV(GAC)

IRa · 139550-139621 · 72 bp

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Pi 0.0139
MarkerSeek score 60.50
Primer available yes
Label trnV(GAC)

Feature Metadata

Pi Curve

Haplotype Network

Species Separation

Primer Ranking

Primer ID fwd_seq rev_seq fwd_gc rev_gc fwd_tm rev_tm amplicon_size cross_species_success_rate primer_score
trnV(GAC)_p1 TAGTGGCGTTGAGTTTCTCG TCAATCCCACGAGCCTCTTA 50.0 50.0 57.9 58.1 221 bp 1.0 78.8
trnV(GAC)_p2 CGTTGAGTTTCTCGACCCTT TCAATCCCACGAGCCTCTTA 50.0 50.0 57.8 58.1 215 bp 1.0 78.1
trnV(GAC)_p3 CTATTTCTCGATGGGGGCAG TCAATCCCACGAGCCTCTTA 55.0 50.0 57.8 58.1 175 bp 1.0 77.9
trnV(GAC)_p4 TCTATTTCTCGATGGGGGCA TCAATCCCACGAGCCTCTTA 50.0 50.0 58.2 58.1 176 bp 1.0 77.7
trnV(GAC)_p5 ATAGTGCGAAAAGAAGGCCC TCAATCCCACGAGCCTCTTA 50.0 50.0 58.2 58.1 261 bp 1.0 77.2
trnV(GAC)_p1 TCAATCCCACGAGCCTCTTA TAGTGGCGTTGAGTTTCTCG 50.0 50.0 58.1 57.9 221 bp 1.0 78.8
trnV(GAC)_p2 TCAATCCCACGAGCCTCTTA CGTTGAGTTTCTCGACCCTT 50.0 50.0 58.1 57.8 215 bp 1.0 78.1
trnV(GAC)_p3 TCAATCCCACGAGCCTCTTA CTATTTCTCGATGGGGGCAG 50.0 55.0 58.1 57.8 175 bp 1.0 77.9
trnV(GAC)_p4 TCAATCCCACGAGCCTCTTA TCTATTTCTCGATGGGGGCA 50.0 50.0 58.1 58.2 176 bp 1.0 77.7
trnV(GAC)_p5 TCAATCCCACGAGCCTCTTA ATAGTGCGAAAAGAAGGCCC 50.0 50.0 58.1 58.2 261 bp 1.0 77.2