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rps2-rpoC2

LSC · 16916-17121 · 206 bp

Back to Phalaenopsis

Pi 0.0389

MarkerSeek score 68.60

Primer available yes

Label rps2-rpoC2

Feature Metadata

label_name: rps2-rpoC2
feature_type: igs
region: LSC
length_bp: 206
variable_sites: 22
pi: 0.0389
unique_haplotype_count: 11
primer_available: yes
alignment_reliability: 1.00
markerseek_score: 68.60

Pi Curve

Haplotype Network

Species Separation

Primer Ranking

Primer ID	fwd_seq	rev_seq	fwd_gc	rev_gc	fwd_tm	rev_tm	amplicon_size	cross_species_success_rate	primer_score
rps2-rpoC2_p1	AGGAGCCATTCTAGGATTCCA	TCCATGAGACATCAGACCAA	47.6	45.0	57.9	55.9	326-352 bp	1.0	63.9
rps2-rpoC2_p2	AGGAGCCATTCTAGGATTCCA	TTCCATGAGACATCAGACCA	47.6	45.0	57.9	55.9	327-353 bp	1.0	63.9
rps2-rpoC2_p3	AGGAGCCATTCTAGGATTCCA	CTTTCCATGAGACATCAGACCA	47.6	45.5	57.9	57.8	329-355 bp	1.0	63.3
rps2-rpoC2_p4	AGGAGCCATTCTAGGATTCCA	ACTTTCCATGAGACATCAGACC	47.6	45.5	57.9	57.8	330-356 bp	1.0	63.3
rps2-rpoC2_p5	AGGAGCCATTCTAGGATTCCA	TTCCATGAGACATCAGACCAA	47.6	42.9	57.9	56.6	327-353 bp	1.0	62.2