Hotspot

trnT-UGU-trnL-UAA

LSC · 46773-47766 · 994 bp

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Pi 0.0434
MarkerSeek score 76.20
Primer available yes
Label trnT-UGU-trnL-UAA

Feature Metadata

Pi Curve

Haplotype Network

Species Separation

Primer Ranking

Primer ID fwd_seq rev_seq fwd_gc rev_gc fwd_tm rev_tm amplicon_size cross_species_success_rate primer_score
trnT-UGU-trnL-UAA_p1 GCGATGCTCTAACCTCTGAG ACCAATTTCGCCATATCCCC 55.0 50.0 57.9 58.0 1044-1159 bp 1.0 87.8
trnT-UGU-trnL-UAA_p2 GAGTCGAACCGATGACCATC ACCAATTTCGCCATATCCCC 55.0 50.0 58.2 58.0 1075-1190 bp 1.0 87.3
trnT-UGU-trnL-UAA_p3 GCGATGCTCTAACCTCTGAG TAGCGTCTACCAATTTCGCC 55.0 50.0 57.9 58.1 1052-1167 bp 1.0 87.2
trnT-UGU-trnL-UAA_p4 GAGTCGAACCGATGACCATC TAGCGTCTACCAATTTCGCC 55.0 50.0 58.2 58.1 1083-1198 bp 1.0 86.7
trnT-UGU-trnL-UAA_p5 AAAAGCCTGCTATCGGAGTC ACCAATTTCGCCATATCCCC 50.0 50.0 57.7 58.0 1090-1205 bp 1.0 85.9