Hotspot

trnT-UGU-trnL-UAA

LSC · 44964-45958 · 995 bp

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Pi 0
MarkerSeek score 58.80
Primer available yes
Label trnT-UGU-trnL-UAA

Feature Metadata

Pi Curve

Haplotype Network

Species Separation

Primer Ranking

Primer ID fwd_seq rev_seq fwd_gc rev_gc fwd_tm rev_tm amplicon_size cross_species_success_rate primer_score
trnT-UGU-trnL-UAA_p1 GCGATGCTCTAACCTCTGAG ACCAATTTCGCCATATCCCC 55.0 50.0 57.9 58.0 1044-1045 bp 1.0 79.0
trnT-UGU-trnL-UAA_p2 GCGATGCTCTAACCTCTGAG CCGAGGCTCAATCCAATCAA 55.0 50.0 57.9 58.0 1077-1078 bp 1.0 78.7
trnT-UGU-trnL-UAA_p3 GCGATGCTCTAACCTCTGAG TAGCGTCTACCAATTTCGCC 55.0 50.0 57.9 58.1 1052-1053 bp 1.0 78.5
trnT-UGU-trnL-UAA_p4 GGAATCGAACCGATGACCAT ACCAATTTCGCCATATCCCC 50.0 50.0 57.8 58.0 1076-1077 bp 1.0 78.1
trnT-UGU-trnL-UAA_p5 GGAATCGAACCGATGACCAT CCGAGGCTCAATCCAATCAA 50.0 50.0 57.8 58.0 1109-1110 bp 1.0 77.8