Hotspot

trnT-UGU-trnL-UAA

LSC · 46691-47468 · 778 bp

Back to Ophiorrhiza

Pi 0.0091
MarkerSeek score 65.50
Primer available yes
Label trnT-UGU-trnL-UAA

Feature Metadata

Pi Curve

Haplotype Network

Species Separation

Primer Ranking

Primer ID fwd_seq rev_seq fwd_gc rev_gc fwd_tm rev_tm amplicon_size cross_species_success_rate primer_score
trnT-UGU-trnL-UAA_p1 GCGATGCTCTAACCTCTGAG ACCAATTTCGCCATATCCCC 55.0 50.0 57.9 58.0 814-836 bp 1.0 82.4
trnT-UGU-trnL-UAA_p2 GACCGTCGCATTACAAATGC ACCAATTTCGCCATATCCCC 50.0 50.0 58.2 58.0 832-854 bp 1.0 81.9
trnT-UGU-trnL-UAA_p3 GCGATGCTCTAACCTCTGAG TAGCGTCTACCAATTTCGCC 55.0 50.0 57.9 58.1 822-844 bp 1.0 81.8
trnT-UGU-trnL-UAA_p4 GACCGTCGCATTACAAATGC TAGCGTCTACCAATTTCGCC 50.0 50.0 58.2 58.1 840-862 bp 1.0 81.3
trnT-UGU-trnL-UAA_p5 GCGATGCTCTAACCTCTGAG GGGTTTCCATACCAAGGCTC 55.0 55.0 57.9 58.2 858-880 bp 1.0 80.4