Hotspot

trnT-UGU-trnL-UAA

LSC · 51081-52163 · 1083 bp

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Pi 0.0117
MarkerSeek score 70.20
Primer available yes
Label trnT-UGU-trnL-UAA

Feature Metadata

Pi Curve

Haplotype Network

Species Separation

Primer Ranking

Primer ID fwd_seq rev_seq fwd_gc rev_gc fwd_tm rev_tm amplicon_size cross_species_success_rate primer_score
trnT-UGU-trnL-UAA_p1 GCGATGCTCTAACCTCTGAG ACCAATTTCGCCATATCCCC 55.0 50.0 57.9 58.0 1081-1133 bp 1.0 83.8
trnT-UGU-trnL-UAA_p2 GAGTCGAACCGATGACCATC ACCAATTTCGCCATATCCCC 55.0 50.0 58.2 58.0 1112-1164 bp 1.0 83.5
trnT-UGU-trnL-UAA_p3 GCGATGCTCTAACCTCTGAG TAGCGTCTACCAATTTCGCC 55.0 50.0 57.9 58.1 1089-1141 bp 1.0 83.2
trnT-UGU-trnL-UAA_p4 GAGTCGAACCGATGACCATC TAGCGTCTACCAATTTCGCC 55.0 50.0 58.2 58.1 1120-1172 bp 1.0 83.0
trnT-UGU-trnL-UAA_p5 AAAAGCCAGCTATCGGAGTC ACCAATTTCGCCATATCCCC 50.0 50.0 57.7 58.0 1127-1179 bp 1.0 82.2