Hotspot

trnT-UGU-trnL-UAA

LSC · 45511-46393 · 883 bp

Back to Moraea

Pi 0.037
MarkerSeek score 71.60
Primer available yes
Label trnT-UGU-trnL-UAA

Feature Metadata

Pi Curve

Haplotype Network

Species Separation

Primer Ranking

Primer ID fwd_seq rev_seq fwd_gc rev_gc fwd_tm rev_tm amplicon_size cross_species_success_rate primer_score
trnT-UGU-trnL-UAA_p1 CGAACCGATGACCATCACAT ACCAATTTCGCCATATCCCC 50.0 50.0 58.1 58.0 960-967 bp 1.0 83.6
trnT-UGU-trnL-UAA_p2 ACCCCACATTGGAAGAGAGA ACCAATTTCGCCATATCCCC 50.0 50.0 58.0 58.0 1021-1028 bp 1.0 83.4
trnT-UGU-trnL-UAA_p3 CGAACCGATGACCATCACAT TAGCGTCTACCAATTTCGCC 50.0 50.0 58.1 58.1 968-975 bp 1.0 83.0
trnT-UGU-trnL-UAA_p4 ACCCCACATTGGAAGAGAGA TAGCGTCTACCAATTTCGCC 50.0 50.0 58.0 58.1 1029-1036 bp 1.0 82.9
trnT-UGU-trnL-UAA_p5 ATCGAACCGATGACCATCAC ACCAATTTCGCCATATCCCC 50.0 50.0 57.8 58.0 962-969 bp 1.0 82.2