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atpH-atpI

LSC · 13448-14381 · 934 bp

Back to Lagopsis

Pi 0.00428

MarkerSeek score 61.50

Primer available yes

Label atpH-atpI

Feature Metadata

label_name: atpH-atpI
feature_type: igs
region: LSC
length_bp: 934
variable_sites: 6
pi: 0.00428
unique_haplotype_count: 3
primer_available: yes
alignment_reliability: 1.00
markerseek_score: 61.50

Pi Curve

Haplotype Network

Species Separation

Primer Ranking

Primer ID	fwd_seq	rev_seq	fwd_gc	rev_gc	fwd_tm	rev_tm	amplicon_size	cross_species_success_rate	primer_score
atpH-atpI_p1	ATAACGGAAGCGGCAGAAAT	CCCGTCATGTTCCTTGGATT	45.0	50.0	58.0	57.9	1068 bp	1.0	79.1
atpH-atpI_p2	TCCGATAGAAGCAAGCCCTA	CCCGTCATGTTCCTTGGATT	50.0	50.0	57.9	57.9	1105 bp	1.0	78.7
atpH-atpI_p3	TCCAGGTCCGATAGAAGCAA	CCCGTCATGTTCCTTGGATT	50.0	50.0	58.1	57.9	1111 bp	1.0	78.3
atpH-atpI_p4	AGCCAATCCAGCAGCAATAA	CCCGTCATGTTCCTTGGATT	45.0	50.0	57.9	57.9	1084 bp	1.0	78.2
atpH-atpI_p5	CCGATAGAAGCAAGCCCTAC	CCCGTCATGTTCCTTGGATT	55.0	50.0	57.8	57.9	1104 bp	1.0	78.2