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psaC-ndhE

SSC · 125227-125943 · 717 bp

Back to Kaempferia

Pi 0.0449

MarkerSeek score 81.10

Primer available yes

Label psaC-ndhE

Feature Metadata

label_name: psaC-ndhE
feature_type: igs
region: SSC
length_bp: 717
variable_sites: 57
pi: 0.0449
unique_haplotype_count: 4
primer_available: yes
alignment_reliability: 0.96
markerseek_score: 81.10

Pi Curve

Haplotype Network

Species Separation

Primer Ranking

Primer ID	fwd_seq	rev_seq	fwd_gc	rev_gc	fwd_tm	rev_tm	amplicon_size	cross_species_success_rate	primer_score
psaC-ndhE_p1	CATAAATTTTTACTGAATGTGACA	AACGCGTATCAACCAATCGA	25.0	45.0	52.3	58.0	771-877 bp	1.0	49.7
psaC-ndhE_p2	CATAAATTTTTACTGAATGTGACA	ACGCGTATCAACCAATCGAA	25.0	45.0	52.3	58.0	770-876 bp	1.0	49.7
psaC-ndhE_p3	CATAAATTTTTACTGAATGTGACA	CAACGCGTATCAACCAATCG	25.0	50.0	52.3	57.9	772-878 bp	1.0	49.7
psaC-ndhE_p4	TCATAAATTTTTACTGAATGTGAC	AACGCGTATCAACCAATCGA	25.0	45.0	52.1	58.0	772-878 bp	1.0	49.7
psaC-ndhE_p5	TCATAAATTTTTACTGAATGTGAC	ACGCGTATCAACCAATCGAA	25.0	45.0	52.1	58.0	771-877 bp	1.0	49.7