Hotspot

trnT-UGU-trnL-UAA

LSC · 48446-49301 · 856 bp

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Pi 0.00731
MarkerSeek score 67.70
Primer available yes
Label trnT-UGU-trnL-UAA

Feature Metadata

Pi Curve

Haplotype Network

Species Separation

Primer Ranking

Primer ID fwd_seq rev_seq fwd_gc rev_gc fwd_tm rev_tm amplicon_size cross_species_success_rate primer_score
trnT-UGU-trnL-UAA_p1 GCGATGCTCTAACCTCTGAG ACCAATTTCGCCATATCCCC 55.0 50.0 57.9 58.0 559-919 bp 1.0 89.7
trnT-UGU-trnL-UAA_p2 GCGATGCTCTAACCTCTGAG TAGCGTCTACCAATTTCGCC 55.0 50.0 57.9 58.1 567-927 bp 1.0 89.1
trnT-UGU-trnL-UAA_p3 GGAATCGAACCGATGACCAT ACCAATTTCGCCATATCCCC 50.0 50.0 57.8 58.0 591-951 bp 1.0 88.6
trnT-UGU-trnL-UAA_p4 GGAATCGAACCGATGACCAT TAGCGTCTACCAATTTCGCC 50.0 50.0 57.8 58.1 599-959 bp 1.0 88.0
trnT-UGU-trnL-UAA_p5 ATAACGAGAGAAAAGCCGGC ACCAATTTCGCCATATCCCC 50.0 50.0 58.3 58.0 615-975 bp 1.0 87.6