Hotspot

trnT-UGU-trnL-UAA

LSC · 47463-48465 · 1003 bp

Back to Hyophorbe

Pi 0.00399
MarkerSeek score 61.00
Primer available yes
Label trnT-UGU-trnL-UAA

Feature Metadata

Pi Curve

Haplotype Network

Species Separation

Primer Ranking

Primer ID fwd_seq rev_seq fwd_gc rev_gc fwd_tm rev_tm amplicon_size cross_species_success_rate primer_score
trnT-UGU-trnL-UAA_p1 AAAGCCAGCTATCGGAATCG ACCAATTTCGCCATATCCCC 50.0 50.0 58.1 58.0 1098-1115 bp 1.0 79.2
trnT-UGU-trnL-UAA_p2 AAAGCCAGCTATCGGAATCG TAGCGTCTACCAATTTCGCC 50.0 50.0 58.1 58.1 1106-1123 bp 1.0 78.7
trnT-UGU-trnL-UAA_p3 GGAATCGAACCGATGACCAT ACCAATTTCGCCATATCCCC 50.0 50.0 57.8 58.0 1085-1102 bp 1.0 78.3
trnT-UGU-trnL-UAA_p4 TCTAACCCCTGAGCTAAGCA ACCAATTTCGCCATATCCCC 50.0 50.0 57.8 58.0 1046-1063 bp 1.0 78.3
trnT-UGU-trnL-UAA_p5 GGAATCGAACCGATGACCAT TAGCGTCTACCAATTTCGCC 50.0 50.0 57.8 58.1 1093-1110 bp 1.0 77.8