Hotspot

trnT-UGU-trnL-UAA

LSC · 46082-46987 · 906 bp

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Pi 0.00215
MarkerSeek score 53.60
Primer available yes
Label trnT-UGU-trnL-UAA

Feature Metadata

Pi Curve

Haplotype Network

Species Separation

Primer Ranking

Primer ID fwd_seq rev_seq fwd_gc rev_gc fwd_tm rev_tm amplicon_size cross_species_success_rate primer_score
trnT-UGU-trnL-UAA_p1 GCGATGCTCTAACCTCTGAG ACCAATTTCGCCATATCCCC 55.0 50.0 57.9 58.0 929-956 bp 1.0 82.5
trnT-UGU-trnL-UAA_p2 GCGATGCTCTAACCTCTGAG ACAATCAAGTCCGTAGCGTC 55.0 50.0 57.9 58.0 950-977 bp 1.0 82.5
trnT-UGU-trnL-UAA_p3 GCGATGCTCTAACCTCTGAG TAGCGTCTACCAATTTCGCC 55.0 50.0 57.9 58.1 937-964 bp 1.0 82.0
trnT-UGU-trnL-UAA_p4 GGAATCGAACCGATGACCAT ACCAATTTCGCCATATCCCC 50.0 50.0 57.8 58.0 961-988 bp 1.0 81.6
trnT-UGU-trnL-UAA_p5 GGAATCGAACCGATGACCAT ACAATCAAGTCCGTAGCGTC 50.0 50.0 57.8 58.0 982-1009 bp 1.0 81.5