Hotspot

trnT-UGU-trnL-UAA

LSC · 46744-47539 · 796 bp

Back to Hippophae

Pi 0.0179
MarkerSeek score 71.60
Primer available yes
Label trnT-UGU-trnL-UAA

Feature Metadata

Pi Curve

Haplotype Network

Species Separation

Primer Ranking

Primer ID fwd_seq rev_seq fwd_gc rev_gc fwd_tm rev_tm amplicon_size cross_species_success_rate primer_score
trnT-UGU-trnL-UAA_p1 GCGATGCTCTAACCTCTGAG ACCAATTTCGCCATATCCCC 55.0 50.0 57.9 58.0 664-846 bp 1.0 88.9
trnT-UGU-trnL-UAA_p2 GCGATGCTCTAACCTCTGAG TAGCGTCTACCAATTTCGCC 55.0 50.0 57.9 58.1 672-854 bp 1.0 88.3
trnT-UGU-trnL-UAA_p3 GGAATCGAACCGATGACCAT ACCAATTTCGCCATATCCCC 50.0 50.0 57.8 58.0 696-878 bp 1.0 87.8
trnT-UGU-trnL-UAA_p4 ATGGAGAAAAGCCGGCTATC ACCAATTTCGCCATATCCCC 50.0 50.0 57.7 58.0 716-898 bp 1.0 87.5
trnT-UGU-trnL-UAA_p5 GATGGAGAAAAGCCGGCTAT ACCAATTTCGCCATATCCCC 50.0 50.0 57.7 58.0 717-899 bp 1.0 87.5