Pi
0.0329
MarkerSeek score
68.00
Primer available
yes
Label
rrn16
Feature Metadata
Pi Curve
Haplotype Network
Species Separation
Primer Ranking
| Primer ID | fwd_seq | rev_seq | fwd_gc | rev_gc | fwd_tm | rev_tm | amplicon_size | cross_species_success_rate | primer_score |
|---|---|---|---|---|---|---|---|---|---|
| rrn16_p1 | CGAATCCGCTTTGTCTACGA | AACTCAGACGTAGCTCCCTT | 50.0 | 50.0 | 58.1 | 58.1 | 1622-1626 bp | 1.0 | 83.8 |
| rrn16_p2 | CGAATCCGCTTTGTCTACGA | TGTTTTGGGTGTGAAGCAGT | 50.0 | 45.0 | 58.1 | 58.2 | 1597-1601 bp | 1.0 | 83.2 |
| rrn16_p3 | CGAATCCGCTTTGTCTACGA | GTTTTGGGTGTGAAGCAGTG | 50.0 | 50.0 | 58.1 | 57.8 | 1596-1600 bp | 1.0 | 82.8 |
| rrn16_p4 | CGAATCCGCTTTGTCTACGA | TCAGACGTAGCTCCCTTCTT | 50.0 | 50.0 | 58.1 | 57.8 | 1619-1623 bp | 1.0 | 82.6 |
| rrn16_p5 | GAACTCCGGGCGAATATGAA | AACTCAGACGTAGCTCCCTT | 50.0 | 50.0 | 57.8 | 58.1 | 1683-1687 bp | 1.0 | 82.5 |
| rrn16_p1 | AACTCAGACGTAGCTCCCTT | CGAATCCGCTTTGTCTACGA | 50.0 | 50.0 | 58.1 | 58.1 | 1622-1626 bp | 1.0 | 83.7 |
| rrn16_p2 | TGTTTTGGGTGTGAAGCAGT | CGAATCCGCTTTGTCTACGA | 45.0 | 50.0 | 58.2 | 58.1 | 1597-1601 bp | 1.0 | 83.1 |
| rrn16_p3 | GTTTTGGGTGTGAAGCAGTG | CGAATCCGCTTTGTCTACGA | 50.0 | 50.0 | 57.8 | 58.1 | 1596-1600 bp | 1.0 | 82.7 |
| rrn16_p4 | TCAGACGTAGCTCCCTTCTT | CGAATCCGCTTTGTCTACGA | 50.0 | 50.0 | 57.8 | 58.1 | 1619-1623 bp | 1.0 | 82.5 |
| rrn16_p5 | AACTCAGACGTAGCTCCCTT | GAACTCCGGGCGAATATGAA | 50.0 | 50.0 | 58.1 | 57.8 | 1683-1687 bp | 1.0 | 82.4 |