Hotspot

trnT-UGU-trnL-UAA

LSC · 46670-47286 · 617 bp

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Pi 0.00324
MarkerSeek score 57.30
Primer available yes
Label trnT-UGU-trnL-UAA

Feature Metadata

Pi Curve

Haplotype Network

Species Separation

Primer Ranking

Primer ID fwd_seq rev_seq fwd_gc rev_gc fwd_tm rev_tm amplicon_size cross_species_success_rate primer_score
trnT-UGU-trnL-UAA_p1 AGAAAAAGAGCCGGCTATCG ACCAATTTCGCCATATCCCC 50.0 50.0 58.1 58.0 718 bp 1.0 79.9
trnT-UGU-trnL-UAA_p2 AGAAAAAGAGCCGGCTATCG TAGCGTCTACCAATTTCGCC 50.0 50.0 58.1 58.1 726 bp 1.0 79.4
trnT-UGU-trnL-UAA_p3 GCGATGCTCTAACCTCTGAG ACCAATTTCGCCATATCCCC 55.0 50.0 57.9 58.0 667 bp 1.0 79.4
trnT-UGU-trnL-UAA_p4 GCGATGCTCTAACCTCTGAG TAGCGTCTACCAATTTCGCC 55.0 50.0 57.9 58.1 675 bp 1.0 78.9
trnT-UGU-trnL-UAA_p5 GGAATCGAACCGATGACCAT ACCAATTTCGCCATATCCCC 50.0 50.0 57.8 58.0 699 bp 1.0 78.5