Hotspot

trnT-UGU-trnL-UAA

LSC · 46680-47684 · 1005 bp

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Pi 0.0764
MarkerSeek score 82.60
Primer available yes
Label trnT-UGU-trnL-UAA

Feature Metadata

Pi Curve

Haplotype Network

Species Separation

Primer Ranking

Primer ID fwd_seq rev_seq fwd_gc rev_gc fwd_tm rev_tm amplicon_size cross_species_success_rate primer_score
trnT-UGU-trnL-UAA_p1 ATGGCTTTTGGAAAGGGGAG ACCAATTTCGCCATATCCCC 50.0 50.0 58.1 58.0 1097-1200 bp 1.0 91.5
trnT-UGU-trnL-UAA_p2 GATGGCTTTTGGAAAGGGGA ACCAATTTCGCCATATCCCC 50.0 50.0 58.1 58.0 1098-1201 bp 1.0 91.5
trnT-UGU-trnL-UAA_p3 AAACTTGACCTGTTGACCCC ACCAATTTCGCCATATCCCC 50.0 50.0 57.9 58.0 1579-1684 bp 1.0 91.4
trnT-UGU-trnL-UAA_p4 TTTTGGAAAGGGGAGATGCC ACCAATTTCGCCATATCCCC 50.0 50.0 58.1 58.0 1128-1195 bp 0.714286 80.0
trnT-UGU-trnL-UAA_p5 AGGATGGCTTTTGGAAAGGG ACCAATTTCGCCATATCCCC 50.0 50.0 58.1 58.0 1136-1203 bp 0.571429 74.1