Hotspot

petN-psbM

LSC · 30382-31252 · 871 bp

Back to Dendropanax

Pi 0.00536

MarkerSeek score 62.20

Primer available yes

Label petN-psbM

Feature Metadata

label_name: petN-psbM
feature_type: igs
region: LSC
length_bp: 871
variable_sites: 7
pi: 0.00536
unique_haplotype_count: 3
primer_available: yes
alignment_reliability: 1.00
markerseek_score: 62.20

Pi Curve

Haplotype Network

Species Separation

Primer Ranking

Primer ID	fwd_seq	rev_seq	fwd_gc	rev_gc	fwd_tm	rev_tm	amplicon_size	cross_species_success_rate	primer_score
petN-psbM_p1	TCTTGCTTGGGCTGCTTTAA	TGCTACTGCACTGTTCATTCT	45.0	42.9	58.0	57.6	1029 bp	1.0	69.2
petN-psbM_p2	AGTAAGTCTTGCTTGGGCTG	TGCTACTGCACTGTTCATTCT	50.0	42.9	57.8	57.6	1035 bp	1.0	67.8
petN-psbM_p3	ATGGGGAAGAAGTGGACTCT	TGCTACTGCACTGTTCATTCT	50.0	42.9	57.6	57.6	975 bp	1.0	66.5
petN-psbM_p4	TCTTGCTTGGGCTGCTTTAA	AGTTCCTACTGCTTTTCTGCT	45.0	42.9	58.0	57.2	1008 bp	1.0	66.3
petN-psbM_p5	TCTTGCTTGGGCTGCTTTAA	TGCTACTGCACTGTTCATTC	45.0	45.0	58.0	56.1	1029 bp	1.0	65.1