Hotspot

psbA

LSC · 87-1148 · 1062 bp

Back to Dactylis

Pi 0

MarkerSeek score 29.90

Primer available yes

Label psbA

Feature Metadata

label_name: psbA
feature_type: gene
region: LSC
length_bp: 1062
variable_sites: 0
pi: 0
unique_haplotype_count: 1
primer_available: yes
alignment_reliability: 1.00
markerseek_score: 29.90

Pi Curve

Haplotype Network

Species Separation

Primer Ranking

Primer ID	fwd_seq	rev_seq	fwd_gc	rev_gc	fwd_tm	rev_tm	amplicon_size	cross_species_success_rate	primer_score
psbA_p1	TGGGTATTTCTAGCTTTTCTTTCT	AATACGTGTGCTTGGGAGTC	33.3	50.0	56.0	57.9	1167 bp	1.0	40.0
psbA_p2	TGGGTATTTCTAGCTTTTCTTTCTT	AATACGTGTGCTTGGGAGTC	32.0	50.0	56.7	57.9	1167 bp	1.0	40.0
psbA_p3	TTGGGTATTTCTAGCTTTTCTTTCT	AATACGTGTGCTTGGGAGTC	32.0	50.0	56.7	57.9	1168 bp	1.0	40.0
psbA_p4	GGGTATTTCTAGCTTTTCTTTCTTCA	AATACGTGTGCTTGGGAGTC	34.6	50.0	57.7	57.9	1166 bp	1.0	40.0
psbA_p5	TGGGTATTTCTAGCTTTTCTTTCTTC	AATACGTGTGCTTGGGAGTC	34.6	50.0	57.7	57.9	1167 bp	1.0	40.0