Pi
0.0694
MarkerSeek score
68.70
Primer available
yes
Label
trnQ-UUG
Feature Metadata
Pi Curve
Haplotype Network
Species Separation
Primer Ranking
| Primer ID | fwd_seq | rev_seq | fwd_gc | rev_gc | fwd_tm | rev_tm | amplicon_size | cross_species_success_rate | primer_score |
|---|---|---|---|---|---|---|---|---|---|
| trnQ-UUG_p1 | TTAGTCCAACCAAGCCAACC | CGAAAACTTACAGCGGCTTG | 50.0 | 50.0 | 58.0 | 58.0 | 1351-1354 bp | 1.0 | 82.7 |
| trnQ-UUG_p2 | TTAGTCCAACCAAGCCAACC | ATCGAAAACTTACAGCGGCT | 50.0 | 45.0 | 58.0 | 57.9 | 1353-1356 bp | 1.0 | 82.3 |
| trnQ-UUG_p3 | GTCCAACCAAGCCAACCATA | CGAAAACTTACAGCGGCTTG | 50.0 | 50.0 | 58.1 | 58.0 | 1348-1351 bp | 1.0 | 82.1 |
| trnQ-UUG_p4 | TTAGTCCAACCAAGCCAACC | TCGAAAACTTACAGCGGCTT | 50.0 | 45.0 | 58.0 | 58.1 | 1352-1355 bp | 1.0 | 82.1 |
| trnQ-UUG_p5 | TTAGTCCAACCAAGCCAACC | GGGCAATTTGGCGAAGAAAA | 50.0 | 45.0 | 58.0 | 57.8 | 1250-1253 bp | 1.0 | 82.1 |
| trnQ-UUG_p1 | TTAGTCCAACCAAGCCAACC | CATATTCGGCGACCTGTTGA | 50.0 | 50.0 | 58.0 | 58.1 | 1094-1097 bp | 1.0 | 83.4 |
| trnQ-UUG_p2 | TTAGTCCAACCAAGCCAACC | TCATATTCGGCGACCTGTTG | 50.0 | 50.0 | 58.0 | 58.1 | 1095-1098 bp | 1.0 | 83.4 |
| trnQ-UUG_p3 | TTAGTCCAACCAAGCCAACC | TACGCAATGGGAAGGTTGAG | 50.0 | 50.0 | 58.0 | 57.9 | 1138-1141 bp | 1.0 | 82.9 |
| trnQ-UUG_p4 | TTAGTCCAACCAAGCCAACC | ACCTCTTGACACCTAGGCAT | 50.0 | 50.0 | 58.0 | 58.0 | 1031 bp | 0.5 | 59.6 |
| trnQ-UUG_p5 | GTCCAACCAAGCCAACCATA | ACCTCTTGACACCTAGGCAT | 50.0 | 50.0 | 58.1 | 58.0 | 1028 bp | 0.5 | 59.0 |