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atpH-atpI

LSC · 14238-15632 · 1395 bp

Back to Cornukaempferia

Pi 0.0588

MarkerSeek score 85.30

Primer available yes

Label atpH-atpI

Feature Metadata

label_name: atpH-atpI
feature_type: igs
region: LSC
length_bp: 1395
variable_sites: 60
pi: 0.0588
unique_haplotype_count: 2
primer_available: yes
alignment_reliability: 0.73
markerseek_score: 85.30

Pi Curve

Haplotype Network

Species Separation

Primer Ranking

Primer ID	fwd_seq	rev_seq	fwd_gc	rev_gc	fwd_tm	rev_tm	amplicon_size	cross_species_success_rate	primer_score
atpH-atpI_p1	ATAACGGAAGCGGCAGAAAT	ATTTTTGCAACCTTAGCCGC	45.0	45.0	58.0	57.9	1109-1484 bp	1.0	86.8
atpH-atpI_p2	TACCTTCTACAGCTTGGCCT	ATTTTTGCAACCTTAGCCGC	50.0	45.0	58.0	57.9	1192-1567 bp	1.0	86.5
atpH-atpI_p3	TACCTTGACCAACTCCAGGT	ATTTTTGCAACCTTAGCCGC	50.0	45.0	57.9	57.9	1165-1540 bp	1.0	86.0
atpH-atpI_p4	AATAACGGAAGCGGCAGAAA	ATTTTTGCAACCTTAGCCGC	45.0	45.0	58.2	57.9	1110-1485 bp	1.0	85.6
atpH-atpI_p5	GCAGTACCTTGACCAACTCC	ATTTTTGCAACCTTAGCCGC	55.0	45.0	58.2	57.9	1169-1544 bp	1.0	85.4