Hotspot

trnT-UGU-trnL-UAA

LSC · 48934-49941 · 1008 bp

Back to Corchoropsis

Pi 0.00529
MarkerSeek score 56.90
Primer available yes
Label trnT-UGU-trnL-UAA

Feature Metadata

Pi Curve

Haplotype Network

Species Separation

Primer Ranking

Primer ID fwd_seq rev_seq fwd_gc rev_gc fwd_tm rev_tm amplicon_size cross_species_success_rate primer_score
trnT-UGU-trnL-UAA_p1 GCGATGCTCTAACCTCTGAG ACCAATTTCGCCATATCCCC 55.0 50.0 57.9 58.0 1058-1065 bp 1.0 79.5
trnT-UGU-trnL-UAA_p2 GCGATGCTCTAACCTCTGAG TAGCGTCTACCAATTTCGCC 55.0 50.0 57.9 58.1 1066-1073 bp 1.0 79.0
trnT-UGU-trnL-UAA_p3 GGAATCGAACCGATGACCAT ACCAATTTCGCCATATCCCC 50.0 50.0 57.8 58.0 1090-1097 bp 1.0 78.6
trnT-UGU-trnL-UAA_p4 GGAATCGAACCGATGACCAT TAGCGTCTACCAATTTCGCC 50.0 50.0 57.8 58.1 1098-1105 bp 1.0 78.1
trnT-UGU-trnL-UAA_p5 CAAATAGGGAAAGCCGGCTA ACCAATTTCGCCATATCCCC 50.0 50.0 57.7 58.0 1112-1119 bp 1.0 77.8