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psbC

LSC · 34174-35595 · 1422 bp

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Pi 0.00234

MarkerSeek score 36.60

Primer available yes

Label psbC

Feature Metadata

label_name: psbC
feature_type: gene
region: LSC
length_bp: 1422
variable_sites: 5
pi: 0.00234
unique_haplotype_count: 2
primer_available: yes
alignment_reliability: 1.00
markerseek_score: 36.60

Pi Curve

Haplotype Network

Species Separation

Primer Ranking

Primer ID	fwd_seq	rev_seq	fwd_gc	rev_gc	fwd_tm	rev_tm	amplicon_size	cross_species_success_rate	primer_score
psbC_p1	TTTCCCAAGAAATCCGTGCA	TAGCCGAGCCAGAACAGAAA	45.0	50.0	58.0	59.0	1585 bp	1.0	71.9
psbC_p2	TTTCCCAAGAAATCCGTGCA	GCCGAGCCAGAACAGAAAAA	45.0	50.0	58.0	59.0	1583 bp	1.0	71.8
psbC_p3	TTTCCCAAGAAATCCGTGCA	TAGCCGAGCCAGAACAGAA	45.0	52.6	58.0	58.3	1585 bp	1.0	69.5
psbC_p4	GCAGCGGAAGATCCTGAATT	TAGCCGAGCCAGAACAGAAA	50.0	50.0	58.3	59.0	1568 bp	1.0	69.4
psbC_p5	AGGGTATTCGTGCTTGGATG	TAGCCGAGCCAGAACAGAAA	50.0	50.0	57.7	59.0	1513 bp	1.0	69.4