Hotspot

trnT-UGU-trnL-UAA

LSC · 51748-52594 · 847 bp

Back to Castanea

Pi 0.00575
MarkerSeek score 55.20
Primer available yes
Label trnT-UGU-trnL-UAA

Feature Metadata

Pi Curve

Haplotype Network

Species Separation

Primer Ranking

Primer ID fwd_seq rev_seq fwd_gc rev_gc fwd_tm rev_tm amplicon_size cross_species_success_rate primer_score
trnT-UGU-trnL-UAA_p1 AAAGCCTGCTATCGGAATCG ACCAATTTCGCCATATCCCC 50.0 50.0 58.1 58.0 939-943 bp 1.0 80.2
trnT-UGU-trnL-UAA_p2 GCGATGCTCTAACCTCTGAG ACCAATTTCGCCATATCCCC 55.0 50.0 57.9 58.0 894-898 bp 1.0 80.2
trnT-UGU-trnL-UAA_p3 AAAGCCTGCTATCGGAATCG TAGCGTCTACCAATTTCGCC 50.0 50.0 58.1 58.1 947-951 bp 1.0 79.7
trnT-UGU-trnL-UAA_p4 GCGATGCTCTAACCTCTGAG TAGCGTCTACCAATTTCGCC 55.0 50.0 57.9 58.1 902-906 bp 1.0 79.7
trnT-UGU-trnL-UAA_p5 GGAATCGAACCGATGACCAT ACCAATTTCGCCATATCCCC 50.0 50.0 57.8 58.0 926-930 bp 1.0 79.3