Hotspot

trnT-UGU-trnL-UAA

LSC · 45876-46628 · 753 bp

Back to Bomarea

Pi 0.0106
MarkerSeek score 60.10
Primer available yes
Label trnT-UGU-trnL-UAA

Feature Metadata

Pi Curve

Haplotype Network

Species Separation

Primer Ranking

Primer ID fwd_seq rev_seq fwd_gc rev_gc fwd_tm rev_tm amplicon_size cross_species_success_rate primer_score
trnT-UGU-trnL-UAA_p1 GCGATGCTCTAACCTCTGAG ACCAATTTCGCCATATCCCC 55.0 50.0 57.9 58.0 803-804 bp 1.0 79.7
trnT-UGU-trnL-UAA_p2 GCGATGCTCTAACCTCTGAG TAGCGTCTACCAATTTCGCC 55.0 50.0 57.9 58.1 811-812 bp 1.0 79.2
trnT-UGU-trnL-UAA_p3 GGAATCGAACCGATGACCAT ACCAATTTCGCCATATCCCC 50.0 50.0 57.8 58.0 835-836 bp 1.0 78.8
trnT-UGU-trnL-UAA_p4 AAATCGATCAAAAAGCCGGC ACCAATTTCGCCATATCCCC 45.0 50.0 57.7 58.0 859-860 bp 1.0 78.5
trnT-UGU-trnL-UAA_p5 GGAATCGAACCGATGACCAT TAGCGTCTACCAATTTCGCC 50.0 50.0 57.8 58.1 843-844 bp 1.0 78.3