Hotspot

trnT-UGU-trnL-UAA

LSC · 38344-39607 · 1264 bp

Back to Begonia

Pi 0.0513
MarkerSeek score 79.30
Primer available yes
Label trnT-UGU-trnL-UAA

Feature Metadata

Pi Curve

Haplotype Network

Species Separation

Primer Ranking

Primer ID fwd_seq rev_seq fwd_gc rev_gc fwd_tm rev_tm amplicon_size cross_species_success_rate primer_score
trnT-UGU-trnL-UAA_p1 TTGACCCGTTGATCCTTTGG ACCAATTTCGCCATATCCCC 50.0 50.0 58.1 58.0 1280-2018 bp 0.964602 89.8
trnT-UGU-trnL-UAA_p2 TACCCTTCCGGTTCTGGATT ACCAATTTCGCCATATCCCC 50.0 50.0 58.0 58.0 956-1606 bp 0.823009 84.6
trnT-UGU-trnL-UAA_p3 TACCCTTCCGGTTCTGGATT ACGCAGTCAACTCCATTTGT 50.0 45.0 58.0 58.0 1177-1825 bp 0.778761 82.6
trnT-UGU-trnL-UAA_p4 CCGGTTCTGGGCTTTTTACT ACCAATTTCGCCATATCCCC 50.0 50.0 58.1 58.0 1139-1831 bp 0.495575 71.0
trnT-UGU-trnL-UAA_p5 TCCGGTTCTGGGCTTTTTAC ACCAATTTCGCCATATCCCC 50.0 50.0 58.1 58.0 1140-1832 bp 0.495575 71.0