Hotspot

trnT-UGU-trnL-UAA

LSC · 45418-46447 · 1030 bp

Back to Bactris

Pi 0.00243
MarkerSeek score 55.80
Primer available yes
Label trnT-UGU-trnL-UAA

Feature Metadata

Pi Curve

Haplotype Network

Species Separation

Primer Ranking

Primer ID fwd_seq rev_seq fwd_gc rev_gc fwd_tm rev_tm amplicon_size cross_species_success_rate primer_score
trnT-UGU-trnL-UAA_p1 GCGATGCTCTAACCTCTGAG ACCAATTTCGCCATATCCCC 55.0 50.0 57.9 58.0 480-1080 bp 1.0 83.1
trnT-UGU-trnL-UAA_p2 AAAGCCAGCTATCGGAATCG ACCAATTTCGCCATATCCCC 50.0 50.0 58.1 58.0 525-1125 bp 1.0 82.9
trnT-UGU-trnL-UAA_p3 GCGATGCTCTAACCTCTGAG TAGCGTCTACCAATTTCGCC 55.0 50.0 57.9 58.1 480-1088 bp 1.0 82.5
trnT-UGU-trnL-UAA_p4 AAAGCCAGCTATCGGAATCG TAGCGTCTACCAATTTCGCC 50.0 50.0 58.1 58.1 525-1133 bp 1.0 82.4
trnT-UGU-trnL-UAA_p5 GGAATCGAACCGATGACCAT ACCAATTTCGCCATATCCCC 50.0 50.0 57.8 58.0 512-1112 bp 1.0 82.1