Hotspot

trnT-UGU-trnL-UAA

LSC · 47861-48745 · 885 bp

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Pi 0.00566
MarkerSeek score 62.20
Primer available yes
Label trnT-UGU-trnL-UAA

Feature Metadata

Pi Curve

Haplotype Network

Species Separation

Primer Ranking

Primer ID fwd_seq rev_seq fwd_gc rev_gc fwd_tm rev_tm amplicon_size cross_species_success_rate primer_score
trnT-UGU-trnL-UAA_p1 GCGATGCTCTAACCTCTGAG ACCAATTTCGCCATATCCCC 55.0 50.0 57.9 58.0 935-938 bp 1.0 79.5
trnT-UGU-trnL-UAA_p2 GCGATGCTCTAACCTCTGAG TAGCGTCTACCAATTTCGCC 55.0 50.0 57.9 58.1 943-946 bp 1.0 79.0
trnT-UGU-trnL-UAA_p3 GGAATCGAACCGATGACCAT ACCAATTTCGCCATATCCCC 50.0 50.0 57.8 58.0 967-970 bp 1.0 78.6
trnT-UGU-trnL-UAA_p4 ATGGAGAAAAGCCGGCTATC ACCAATTTCGCCATATCCCC 50.0 50.0 57.7 58.0 987-990 bp 1.0 78.4
trnT-UGU-trnL-UAA_p5 GGAATCGAACCGATGACCAT TAGCGTCTACCAATTTCGCC 50.0 50.0 57.8 58.1 975-978 bp 1.0 78.1