| Genus | Family | Order | Species | Genome length | Top marker | Markers | Primers | Action |
|---|---|---|---|---|---|---|---|---|
| Cabomba | Cabombaceae | Nymphaeales | 3 | 159–164 kb | rpl16-rps3 (80.4) | 279 | 95 | View |
| Cadaba | Capparaceae | Brassicales | 2 | 156–157 kb | trnH-GUG-psbA (79.5) | 275 | 100 | View |
| Caiophora | Loasaceae | Cornales | 2 | 158–158 kb | psbC-trnS-UGA (82.3) | 270 | 95 | View |
| Cajanus | Fabaceae | Fabales | 2 | 152–154 kb | rps11-rpl36 (89.3) | 253 | 90 | View |
| Cakile | Brassicaceae | Brassicales | 12 | 153–154 kb | trnK-UUU-rps16 (59.2) | 269 | 100 | View |
| Caladium | Araceae | Alismatales | 4 | 163–169 kb | psaC-ndhE (89.9) | 270 | 85 | View |
| Calamagrostis | Poaceae | Poales | 4 | 137–137 kb | rps19-psbA (60.7) | 267 | 100 | View |
| Calamus | Arecaceae | Arecales | 6 | 157–158 kb | rps19-psbA (87.3) | 271 | 95 | View |
| Calanthe | Orchidaceae | Asparagales | 38 | 157–159 kb | rps16-trnQ-UUG (85.7) | 279 | 95 | View |
| Caldesia | Alismataceae | Alismatales | 2 | 173–173 kb | psaJ-rpl33 (83.2) | 268 | 105 | View |
| Calendula | Asteraceae | Asterales | 2 | 150–151 kb | petG-petL (63.0) | 267 | 85 | View |
| Callerya | Fabaceae | Fabales | 3 | 130–132 kb | trnG-UCC-trnS-GCU (70.9) | 225 | 85 | View |
| Callianthemum | Ranunculaceae | Ranunculales | 2 | 157–157 kb | trnH-GUG-psbA (79.2) | 265 | 110 | View |
| Callicarpa | Lamiaceae | Lamiales | 20 | 154–154 kb | rpl32-trnL (66.9) | 269 | 100 | View |
| Calligonum | Polygonaceae | Caryophyllales | 21 | 161–163 kb | trnT-GGU-psbD (64.6) | 268 | 115 | View |
| Callisia | Commelinaceae | Commelinales | 3 | 162–164 kb | rrn4.5-rrn5 (86.5) | 275 | 90 | View |
| Callitriche | Plantaginaceae | Lamiales | 4 | 150–151 kb | psbI-trnS-GCU (84.6) | 269 | 90 | View |
| Callitris | Cupressaceae | Cupressales | 2 | 121–124 kb | ycf2-ndhB (83.6) | 227 | 80 | View |
| Callitropsis | Cupressaceae | Cupressales | 2 | 127–128 kb | rps12-clpP (81.7) | 244 | 90 | View |
| Calocedrus | Cupressaceae | Cupressales | 2 | 127–127 kb | ycf2-rpl23 (86.8) | 241 | 75 | View |
| Calochortus | Liliaceae | Liliales | 2 | 156–156 kb | trnS-GCU-trnG-GCC (88.7) | 273 | 100 | View |
| Caloglossa | Delesseriaceae | Ceramiales | 3 | 165–166 kb | ConsOrf5 (82.9) | 463 | 120 | View |
| Calophaca | Fabaceae | Fabales | 2 | 129–129 kb | rps19-rpl2 (98.4) | 228 | 90 | View |
| Calophyllum | Calophyllaceae | Malpighiales | 3 | 161–161 kb | ndhF-rpl32 (69.1) | 269 | 105 | View |
| Calotropis | Apocynaceae | Gentianales | 2 | 166–166 kb | ccsA-ndhD (66.9) | 273 | 85 | View |
| Calycanthus | Calycanthaceae | Laurales | 3 | 153–154 kb | rpl23-trnH(gug) (88.4) | 265 | 80 | View |
| Calypogeia | Calypogeiaceae | Jungermanniales | 2 | 120–120 kb | trnV-UAC-trnM-CAU (80.2) | 270 | 95 | View |
| Calypso | Orchidaceae | Asparagales | 2 | 149–149 kb | psbB-psbT (89.6) | 262 | 90 | View |
| Calyptothecium | Pterobryaceae | Hypnales | 2 | 124–125 kb | atpE-atpB (87.5) | 259 | 75 | View |
| Calystegia | Convolvulaceae | Solanales | 3 | 152–152 kb | psbM-trnD-GUC (60.0) | 258 | 95 | View |
| Camelina | Brassicaceae | Brassicales | 7 | 153–154 kb | trnL-UAA-trnF-GAA (60.2) | 264 | 80 | View |
| Camellia | Theaceae | Ericales | 118 | 156–157 kb | trnE-UUC-psbD (66.5) | 270 | 100 | View |
| Campanula | Campanulaceae | Asterales | 5 | 162–170 kb | trnR-UCU-atpA (75.8) | 248 | 80 | View |
| Campeiostachys | Poaceae | Poales | 3 | 135–135 kb | rps19-psbA (68.8) | 275 | 85 | View |
| Camphora | Lauraceae | Laurales | 2 | 153–154 kb | psbC-trnS(TGA) (73.4) | 261 | 90 | View |
| Campsis | Bignoniaceae | Lamiales | 2 | 154–154 kb | petB-petD (85.4) | 271 | 80 | View |
| Campylaephora | Ceramiaceae | Ceramiales | 2 | 172–172 kb | trpA (83.3) | 459 | 80 | View |
| Campylotropis | Fabaceae | Fabales | 20 | 149–153 kb | rps3-rps19 (84.2) | 268 | 110 | View |
| Canarium | Burseraceae | Sapindales | 3 | 159–163 kb | trnH-GUG-psbA (87.3) | 265 | 60 | View |
| Canavalia | Fabaceae | Fabales | 4 | 158–159 kb | trnQ-UUG-psbK (69.5) | 281 | 95 | View |
| Canna | Cannaceae | Zingiberales | 2 | 164–164 kb | trnS-GCU-trnS-CGA (65.3) | 267 | 65 | View |
| Cannabis | Cannabaceae | Rosales | 2 | 154–154 kb | rpl32-trnL-UAG (63.8) | 287 | 90 | View |
| Capparis | Capparaceae | Brassicales | 6 | 158–158 kb | rpl32-trnL-UAG (76.7) | 267 | 95 | View |
| Capsella | Brassicaceae | Brassicales | 4 | 154–155 kb | trnH-psbA (67.3) | 258 | 110 | View |
| Capsicum | Solanaceae | Solanales | 15 | 157–157 kb | trnL-trnF (58.8) | 265 | 90 | View |
| Caragana | Fabaceae | Fabales | 23 | 128–134 kb | atpH-atpF (83.8) | 229 | 70 | View |
| Carallia | Rhizophoraceae | Malpighiales | 2 | 162–162 kb | ndhD (82.5) | 267 | 75 | View |
| Cardamine | Brassicaceae | Brassicales | 25 | 154–156 kb | trnH-GUG-psbA (86.5) | 267 | 95 | View |
| Cardiocrinum | Liliaceae | Liliales | 2 | 152–152 kb | rps15-ycf1 (66.4) | 277 | 105 | View |
| Carduus | Asteraceae | Asterales | 4 | 152–152 kb | ndhC-trnV-UAC (62.9) | 272 | 95 | View |
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