| Genus | Family | Order | Species | Genome length | Top marker | Markers | Primers | Action |
|---|---|---|---|---|---|---|---|---|
| Schrebera | Oleaceae | Lamiales | 6 | 156–156 kb | trnM(CAU)-psbD (61.4) | 265 | 95 | View |
| Schweinfurthia | Plantaginaceae | Lamiales | 2 | 153–153 kb | petA-psbJ (59.3) | 267 | 80 | View |
| Scilla | Asparagaceae | Asparagales | 2 | 154–155 kb | trnL-UAG-ccsA (79.4) | 271 | 115 | View |
| Scleromitrion | Rubiaceae | Gentianales | 2 | 154–154 kb | trnD-GUC-trnY-GUA (74.0) | 267 | 100 | View |
| Scolopia | Salicaceae | Malpighiales | 2 | 156–157 kb | rpoC1-rpoB (74.6) | 269 | 105 | View |
| Scopolia | Solanaceae | Solanales | 2 | 156–156 kb | trnK-rps16 (73.7) | 277 | 105 | View |
| Scorpiothyrsus | Melastomataceae | Myrtales | 3 | 156–156 kb | trnH-GUG-psbA (89.8) | 262 | 95 | View |
| Scorzonera | Asteraceae | Asterales | 2 | 152–153 kb | trnW-trnP (75.9) | 272 | 100 | View |
| Scrophularia | Scrophulariaceae | Lamiales | 32 | 152–154 kb | trnK-UUU-rps16 (80.3) | 273 | 105 | View |
| Scurrula | Loranthaceae | Santalales | 7 | 120–124 kb | trnT-UGU-trnL-UAA (88.7) | 232 | 95 | View |
| Scutellaria | Lamiaceae | Lamiales | 178 | 151–153 kb | rpl32-trnL-UAG (73.6) | 273 | 85 | View |
| Scytosiphon | Scytosiphonaceae | Ectocarpales | 2 | 134–134 kb | rns-psbA (80.6) | 336 | 80 | View |
| Secale | Poaceae | Poales | 7 | 115–137 kb | ndhH-psbA (56.9) | 229 | 75 | View |
| Sedum | Crassulaceae | Saxifragales | 23 | 149–151 kb | trnS-GCU-trnG-GCC (82.2) | 273 | 90 | View |
| Selenicereus | Cactaceae | Caryophyllales | 3 | 133–133 kb | trnT-UGU-trnL-UAA (66.1) | 256 | 70 | View |
| Semenovia | Apiaceae | Apiales | 6 | 142–147 kb | rrn16-trnH-GUG (97.4) | 249 | 80 | View |
| Semiaquilegia | Ranunculaceae | Ranunculales | 2 | 162–164 kb | psbL-psbF (78.6) | 269 | 115 | View |
| Semiliquidambar | Hamamelidaceae | Saxifragales | 2 | 160–160 kb | petA-psbJ (68.6) | 274 | 90 | View |
| Sempervivum | Crassulaceae | Saxifragales | 6 | 151–151 kb | trnH-GUG-psbA (74.5) | 273 | 100 | View |
| Senecio | Asteraceae | Asterales | 12 | 150–151 kb | trnC-GCA-petN (73.1) | 272 | 105 | View |
| Senegalia | Fabaceae | Fabales | 3 | 163–173 kb | atpF-atpH (92.3) | 262 | 100 | View |
| Senna | Fabaceae | Fabales | 13 | 159–162 kb | trnT-UGU-trnL-UAA (83.8) | 256 | 100 | View |
| Sesamum | Pedaliaceae | Lamiales | 2 | 153–153 kb | ycf1-ndhF (74.7) | 275 | 90 | View |
| Seseli | Apiaceae | Apiales | 17 | 145–156 kb | rpl32-trnL-UAG (83.1) | 265 | 90 | View |
| Sesleria | Poaceae | Poales | 2 | 136–136 kb | rps19-psbA (75.4) | 265 | 95 | View |
| Sesuvium | Aizoaceae | Caryophyllales | 2 | 156–156 kb | trnH-GUG-psbA (84.2) | 265 | 105 | View |
| Setaria | Poaceae | Poales | 4 | 138–139 kb | psbM-petN (70.1) | 273 | 100 | View |
| Shibataea | Poaceae | Poales | 3 | 140–140 kb | rbcL-psaI (61.1) | 266 | 90 | View |
| Shivparvatia | Caryophyllaceae | Caryophyllales | 2 | 138–147 kb | rpl32-trnL-UAG (84.0) | 263 | 70 | View |
| Sibbaldia | Rosaceae | Rosales | 4 | 153–154 kb | trnH-GUG-psbA (82.1) | 268 | 105 | View |
| Sibbaldianthe | Rosaceae | Rosales | 4 | 155–155 kb | accD-psaI (72.9) | 269 | 95 | View |
| Sicyos | Cucurbitaceae | Cucurbitales | 2 | 155–155 kb | trnK-rps16 (87.0) | 264 | 80 | View |
| Sida | Malvaceae | Malvales | 4 | 160–160 kb | trnH-GUG-psbA (80.5) | 266 | 100 | View |
| Silene | Caryophyllaceae | Caryophyllales | 29 | 147–161 kb | rps16-trnQ-UUG (85.8) | 268 | 75 | View |
| Silphium | Asteraceae | Asterales | 2 | 152–152 kb | trnL-UAG-rpl32 (82.7) | 272 | 70 | View |
| Simarouba | Simaroubaceae | Sapindales | 2 | 160–160 kb | ccsA (82.9) | 268 | 85 | View |
| Sinalliaria | Brassicaceae | Brassicales | 2 | 154–154 kb | trnH-psbA (78.5) | 225 | 105 | View |
| Sinobambusa | Poaceae | Poales | 7 | 140–140 kb | trnT-UGU-trnL-UAA (50.4) | 263 | 90 | View |
| Sinocarum | Apiaceae | Apiales | 8 | 151–164 kb | trnT-UGU-trnL-UAA (86.9) | 272 | 85 | View |
| Sinocrassula | Crassulaceae | Saxifragales | 2 | 152–152 kb | psbZ-trnG-UCC (80.6) | 272 | 95 | View |
| Sinogentiana | Gentianaceae | Gentianales | 2 | 134–144 kb | trnN-GUU-ndhF (85.5) | 254 | 85 | View |
| Sinojackia | Styracaceae | Ericales | 6 | 159–159 kb | rbcL-accD (53.6) | 266 | 95 | View |
| Sinosasa | Poaceae | Poales | 2 | 140–140 kb | rps19-psbA (70.0) | 266 | 85 | View |
| Sinosenecio | Asteraceae | Asterales | 7 | 150–152 kb | trnK-UUU-rps16 (77.5) | 272 | 100 | View |
| Siphocranion | Lamiaceae | Lamiales | 2 | 152–152 kb | rps18-rpl20 (73.9) | 272 | 100 | View |
| Siraitia | Cucurbitaceae | Cucurbitales | 2 | 159–159 kb | trnM-CAU-atpE (74.4) | 268 | 95 | View |
| Sisymbriopsis | Brassicaceae | Brassicales | 3 | 154–155 kb | ccsA-ndhD (69.7) | 266 | 105 | View |
| Sisymbrium | Brassicaceae | Brassicales | 6 | 154–155 kb | trnH-CAC-psbA (71.5) | 270 | 105 | View |
| Sisyrinchium | Iridaceae | Asparagales | 2 | 151–151 kb | trnF-GAA-ndhJ (89.5) | 272 | 95 | View |
| Sium | Apiaceae | Apiales | 6 | 154–155 kb | trnG-UCC-trnR-UCU (72.4) | 272 | 85 | View |
