| Genus | Family | Order | Species | Genome length | Top marker | Markers | Primers | Action |
|---|---|---|---|---|---|---|---|---|
| Carissa | Apocynaceae | Gentianales | 2 | 155–155 kb | psaA-ycf3 (62.1) | 271 | 105 | View |
| Carlina | Asteraceae | Asterales | 4 | 153–153 kb | rpl2-trnH-GUG (75.2) | 267 | 80 | View |
| Caroxylon | Amaranthaceae | Caryophyllales | 3 | 151–151 kb | ndhC-trnV-UAC (72.1) | 271 | 95 | View |
| Carpinus | Betulaceae | Fagales | 12 | 159–160 kb | trnT-GGT-psbD (89.9) | 242 | 75 | View |
| Carthamus | Asteraceae | Asterales | 4 | 153–153 kb | trnG-UCC-trnT-GGU (63.2) | 267 | 105 | View |
| Carum | Apiaceae | Apiales | 2 | 154–155 kb | petN-psbM (84.8) | 273 | 80 | View |
| Carya | Juglandaceae | Fagales | 10 | 158–161 kb | atpH-atpI (65.1) | 274 | 95 | View |
| Caryodaphnopsis | Lauraceae | Laurales | 12 | 140–149 kb | ndhF (76.3) | 253 | 75 | View |
| Caryopteris | Lamiaceae | Lamiales | 4 | 152–152 kb | ccsA-ndhD (79.6) | 272 | 100 | View |
| Caryota | Arecaceae | Arecales | 2 | 160–160 kb | rps19-psbA (80.6) | 266 | 85 | View |
| Casearia | Salicaceae | Malpighiales | 10 | 156–159 kb | trnS-GCU-trnG-UCC (91.1) | 270 | 100 | View |
| Cassia | Fabaceae | Fabales | 2 | 160–162 kb | accD-psaI (83.2) | 267 | 100 | View |
| Cassytha | Lauraceae | Laurales | 2 | 115–115 kb | rpl32-trnL-UAG (89.4) | 203 | 85 | View |
| Castanea | Fagaceae | Fagales | 5 | 161–161 kb | rbcL-accD (75.5) | 265 | 100 | View |
| Castanopsis | Fagaceae | Fagales | 11 | 160–161 kb | rpoB-trnF-GAA (66.7) | 263 | 95 | View |
| Casuarina | Casuarinaceae | Fagales | 3 | 156–156 kb | trnR-ACG-trnN-GUU (61.3) | 270 | 105 | View |
| Catalpa | Bignoniaceae | Lamiales | 5 | 158–158 kb | rpl2-trnH-GUG (70.9) | 268 | 90 | View |
| Catapodium | Poaceae | Poales | 3 | 134–134 kb | trnC-GCA-rpoB (63.2) | 265 | 80 | View |
| Cathetus | Phyllanthaceae | Malpighiales | 2 | 146–156 kb | psbZ-trnG-GCC (88.0) | 262 | 95 | View |
| Catopsis | Bromeliaceae | Poales | 3 | 158–158 kb | ndhF-rpl32 (73.7) | 281 | 95 | View |
| Cattleya | Orchidaceae | Asparagales | 2 | 147–148 kb | rps19 (69.3) | 280 | 85 | View |
| Caulophyllum | Berberidaceae | Ranunculales | 2 | 157–158 kb | psbT-psbN (87.5) | 271 | 80 | View |
| Cautleya | Zingiberaceae | Zingiberales | 2 | 164–164 kb | psbT-psbN (87.5) | 269 | 80 | View |
| Cedrela | Meliaceae | Sapindales | 2 | 159–159 kb | rpl32-ndhF (82.3) | 271 | 70 | View |
| Celastrus | Celastraceae | Celastrales | 12 | 156–157 kb | trnH-GUG-psbA (82.2) | 274 | 100 | View |
| Celosia | Amaranthaceae | Caryophyllales | 2 | 153–154 kb | psbT-psbN (85.0) | 269 | 95 | View |
| Celtis | Cannabaceae | Rosales | 10 | 159–159 kb | rpl22-trnH-GUG (68.8) | 278 | 90 | View |
| Cenchrus | Poaceae | Poales | 12 | 138–139 kb | petA-psbJ (77.4) | 272 | 90 | View |
| Cenostigma | Fabaceae | Fabales | 2 | 159–160 kb | petD-rpoA (74.9) | 268 | 105 | View |
| Centaurea | Asteraceae | Asterales | 11 | 152–153 kb | ndhC-trnV-UAC (59.0) | 271 | 90 | View |
| Centrolobium | Fabaceae | Fabales | 2 | 159–159 kb | trnS-UGA-psbC (78.6) | 264 | 110 | View |
| Centropogon | Campanulaceae | Asterales | 2 | 166–166 kb | ORF189 (76.1) | 285 | 80 | View |
| Centrosema | Fabaceae | Fabales | 2 | 154–155 kb | rpl32-trnL-UAG (72.4) | 260 | 100 | View |
| Cephalanthera | Orchidaceae | Asparagales | 6 | 161–162 kb | rps8-rpl14 (77.9) | 271 | 100 | View |
| Cephalantheropsis | Orchidaceae | Asparagales | 2 | 158–158 kb | rps16 (63.1) | 280 | 85 | View |
| Cephalotaxus | Taxaceae | Cupressales | 9 | 136–137 kb | rpl36-rps11 (81.1) | 232 | 85 | View |
| Cerastium | Caryophyllaceae | Caryophyllales | 6 | 148–149 kb | trnT-UGU-trnL-UAA (70.3) | 267 | 95 | View |
| Cerasus | Rosaceae | Rosales | 2 | 158–158 kb | rpl32-trnL-UAG (64.4) | 267 | 100 | View |
| Ceratocephala | Ranunculaceae | Ranunculales | 2 | 151–151 kb | ycf3-trnS-GGA (65.1) | 264 | 90 | View |
| Ceratophyllum | Ceratophyllaceae | Ceratophyllales | 4 | 156–157 kb | rpl32-trnL-UAG (78.2) | 269 | 95 | View |
| Ceratopteris | Pteridaceae | Polypodiales | 3 | 149–154 kb | petB (83.3) | 270 | 95 | View |
| Ceratostigma | Plumbaginaceae | Caryophyllales | 3 | 165–165 kb | ycf3-accD (80.4) | 261 | 65 | View |
| Cercidiphyllum | Cercidiphyllaceae | Saxifragales | 2 | 160–160 kb | DR679_pgr001-trnI-GAU (68.9) | 264 | 110 | View |
| Cercis | Fabaceae | Fabales | 3 | 159–159 kb | trnN-GUU-ndhF (77.7) | 261 | 85 | View |
| Cercocarpus | Rosaceae | Rosales | 3 | 158–158 kb | rpl2-trnH-GUG (73.8) | 267 | 100 | View |
| Ceriops | Rhizophoraceae | Malpighiales | 3 | 164–167 kb | trnK-UUU-trnQ-UUG (86.2) | 265 | 85 | View |
| Ceropegia | Apocynaceae | Gentianales | 4 | 161–161 kb | rpl2-trnH-GUG (73.1) | 267 | 100 | View |
| Chaenomeles | Rosaceae | Rosales | 4 | 160–160 kb | ycf3-trnS (49.7) | 270 | 100 | View |
| Chaenorhinum | Plantaginaceae | Lamiales | 2 | 151–151 kb | psbF-psbE (83.9) | 269 | 100 | View |
| Chaerophyllum | Apiaceae | Apiales | 3 | 153–154 kb | trnH-GUG-psbA (87.8) | 268 | 85 | View |
