| Genus | Family | Order | Species | Genome length | Top marker | Markers | Primers | Action |
|---|---|---|---|---|---|---|---|---|
| Crateva | Capparaceae | Brassicales | 3 | 156–157 kb | psaJ-rpl33 (77.7) | 266 | 95 | View |
| Cratoxylum | Hypericaceae | Malpighiales | 3 | 157–158 kb | trnfM-CAU-trnG-GCC (74.7) | 268 | 110 | View |
| Crawfurdia | Gentianaceae | Gentianales | 2 | 150–151 kb | petA-psbJ (68.4) | 268 | 100 | View |
| Cremanthodium | Asteraceae | Asterales | 5 | 151–151 kb | ndhC-trnV-UAC (63.3) | 271 | 75 | View |
| Cremolobus | Brassicaceae | Brassicales | 2 | 155–155 kb | petD-rpoA (76.4) | 260 | 90 | View |
| Crepidiastrum | Asteraceae | Asterales | 2 | 153–153 kb | trnH-GUG-psbA (83.3) | 275 | 80 | View |
| Crepidium | Orchidaceae | Asparagales | 2 | 159–159 kb | rpoC1-rpoB (87.5) | 274 | 90 | View |
| Crepidomanes | Hymenophyllaceae | Hymenophyllales | 2 | 146–146 kb | trnR-ACG-trnN-GUU (89.9) | 271 | 90 | View |
| Crepis | Asteraceae | Asterales | 8 | 148–152 kb | trnT-UGU-trnL-UAA (88.6) | 275 | 85 | View |
| Crinipes | Poaceae | Poales | 2 | 138–138 kb | petA-psbJ (65.0) | 265 | 100 | View |
| Crinum | Amaryllidaceae | Asparagales | 3 | 159–159 kb | rpl32-trnL-UAG (66.0) | 271 | 100 | View |
| Crocus | Iridaceae | Asparagales | 3 | 151–151 kb | trnR-UCU-atpA (69.3) | 271 | 95 | View |
| Croomia | Stemonaceae | Pandanales | 3 | 154–155 kb | ndhD-ccsA (75.8) | 274 | 85 | View |
| Crotalaria | Fabaceae | Fabales | 4 | 152–153 kb | trnK-UUU-rbcL (83.5) | 262 | 65 | View |
| Croton | Euphorbiaceae | Malpighiales | 6 | 150–177 kb | trnK-UUU-rps16 (85.2) | 282 | 90 | View |
| Crowea | Rutaceae | Sapindales | 3 | 156–156 kb | accD-psaI (64.0) | 273 | 110 | View |
| Crucihimalaya | Brassicaceae | Brassicales | 4 | 155–155 kb | ndhK-ndhC (80.8) | 266 | 95 | View |
| Cryptocarya | Lauraceae | Laurales | 5 | 156–157 kb | ccsA-ndhD (69.2) | 254 | 110 | View |
| Cryptocoryne | Araceae | Alismatales | 2 | 173–173 kb | rpl32-ycf1 (86.0) | 255 | 95 | View |
| Cryptomeria | Cupressaceae | Cupressales | 2 | 132–132 kb | ccsA-petA (70.9) | 244 | 75 | View |
| Cryptospora | Brassicaceae | Brassicales | 2 | 153–154 kb | trnH-CAC-psbA (81.0) | 266 | 90 | View |
| Cryptotaenia | Apiaceae | Apiales | 2 | 153–154 kb | trnH-GUG-psbA (76.1) | 273 | 105 | View |
| Ctenium | Poaceae | Poales | 6 | 134–135 kb | rpl32-ndhF (76.3) | 269 | 115 | View |
| Cucumis | Cucurbitaceae | Cucurbitales | 11 | 155–156 kb | ycf1 (56.6) | 270 | 70 | View |
| Cucurbita | Cucurbitaceae | Cucurbitales | 5 | 157–158 kb | trnL-trnF (81.6) | 256 | 75 | View |
| Cunninghamia | Cupressaceae | Cupressales | 2 | 135–135 kb | trnI-psbA (64.2) | 232 | 75 | View |
| Cuphea | Lythraceae | Myrtales | 7 | 159–160 kb | trnC-GCA-petN (88.4) | 266 | 100 | View |
| Cupressus | Cupressaceae | Cupressales | 4 | 128–129 kb | accD-rpl23 (80.1) | 243 | 70 | View |
| Curcuma | Zingiberaceae | Zingiberales | 21 | 159–164 kb | ndhF-rpl32 (68.6) | 272 | 105 | View |
| Cuscuta | Convolvulaceae | Solanales | 19 | 61–87 kb | accD (83.8) | 191 | 75 | View |
| Cyananthus | Campanulaceae | Asterales | 2 | 166–168 kb | trnQ(UUG) (76.4) | 276 | 85 | View |
| Cyanea | Campanulaceae | Asterales | 2 | 164–165 kb | ORF243 (80.4) | 283 | 75 | View |
| Cyanophora | Cyanophoraceae | Cyanophorales | 2 | 131–150 kb | mntA (83.5) | 378 | 80 | View |
| Cyanotis | Commelinaceae | Commelinales | 2 | 169–171 kb | trnE-UUC-trnT-GGU (87.4) | 272 | 95 | View |
| Cyathodium | Cyathodiaceae | Marchantiales | 2 | 117–119 kb | rps12 (82.0) | 273 | 65 | View |
| Cyathula | Amaranthaceae | Caryophyllales | 2 | 152–152 kb | trnR-UCU (60.5) | 267 | 90 | View |
| Cycas | Cycadaceae | Cycadales | 53 | 162–162 kb | trnH-GUG-psbA (79.0) | 271 | 105 | View |
| Cyclamen | Primulaceae | Ericales | 4 | 152–153 kb | trnS-GCU-trnS-CGA (75.7) | 265 | 100 | View |
| Cyclea | Menispermaceae | Ranunculales | 2 | 160–160 kb | psbI-trnS-GCU (77.7) | 267 | 100 | View |
| Cyclocodon | Campanulaceae | Asterales | 2 | 165–167 kb | trnG-GCC-trnfM-CAU (75.5) | 269 | 85 | View |
| Cyclopogon | Orchidaceae | Asparagales | 2 | 154–155 kb | clpP-psbB (85.3) | 276 | 130 | View |
| Cyclorhiza | Apiaceae | Apiales | 4 | 155–156 kb | 5S ribosomal RNA-trnR-ACG (79.0) | 264 | 105 | View |
| Cyclostephanos | Stephanodiscaceae | Stephanodiscales | 2 | 129–129 kb | ycf89-rns (83.3) | 355 | 85 | View |
| Cyclotella | Stephanodiscaceae | Stephanodiscales | 6 | 127–134 kb | rpl6 (84.5) | 354 | 85 | View |
| Cymatocarpus | Brassicaceae | Brassicales | 3 | 155–155 kb | trnL-UUA-trnF-UUC (91.7) | 266 | 120 | View |
| Cymbaria | Orobanchaceae | Lamiales | 2 | 149–152 kb | trnK-UUU-accD (86.3) | 254 | 75 | View |
| Cymbidium | Orchidaceae | Asparagales | 44 | 150–168 kb | rpoB-trnC-GCA (79.3) | 273 | 65 | View |
| Cymbopogon | Poaceae | Poales | 10 | 140–140 kb | matK-rps16 (62.0) | 261 | 90 | View |
| Cynanchum | Apocynaceae | Gentianales | 8 | 158–161 kb | ndhF-rpl32 (83.4) | 273 | 70 | View |
| Cynara | Asteraceae | Asterales | 5 | 153–153 kb | ndhC-trnV-UAC (52.1) | 277 | 90 | View |
2112 genera