feature_id feature_type parent_gene label_name start end strand length_bp region pi variable_sites indel_sites conserved_left_bp conserved_right_bp primer_available species_resolution unique_haplotype_count species_specific_haplotype_ratio interspecific_divergence alignment_reliability markerseek_score trnH tRNA trnH trnH 119 193 -1 75 LSC 0.000000 0 0 207 13 no 0.000000 1 0.000000 NA 1.000000 19.700000 IGS_001 igs trnH|psbA trnH-psbA 194 601 0 408 LSC 0.047739 19 10 282 300 yes 1.000000 2 1.000000 NA 0.975490 84.400000 psbA gene psbA psbA 602 1663 -1 1062 LSC 0.002825 3 0 20 19 no 1.000000 2 1.000000 NA 1.000000 46.800000 IGS_002 igs psbA|trnK psbA-trnK 1664 1873 0 210 LSC 0.010050 2 11 101 116 no 1.000000 2 1.000000 NA 0.947619 55.600000 trnK_part2 tRNA trnK trnK 1874 1908 -1 35 LSC 0.000000 0 0 180 81 no 0.000000 1 0.000000 NA 1.000000 24.800000 matK gene matK matK 2189 3703 -1 1515 LSC 0.009241 14 0 35 42 no 1.000000 2 1.000000 NA 1.000000 51.700000 IGS_005 igs matK|trnK matK-trnK 3704 4439 0 736 LSC 0.009511 7 0 5 136 no 1.000000 2 1.000000 NA 1.000000 49.600000 trnK_part1 tRNA trnK trnK 4440 4476 -1 37 LSC 0.000000 0 0 210 99 no 0.000000 1 0.000000 NA 1.000000 26.200000 IGS_006 igs trnK|rps16 trnK-rps16 4477 5355 0 879 LSC 0.014035 12 24 247 17 no 1.000000 2 1.000000 NA 0.972696 55.700000 rps16 gene rps16 rps16 5356 6479 -1 1124 LSC 0.008007 9 0 154 195 no 1.000000 2 1.000000 NA 1.000000 59.900000 IGS_007 igs rps16|trnQ rps16-trnQ 6480 7447 0 968 LSC 0.012448 12 4 162 300 no 1.000000 2 1.000000 NA 0.995868 63.500000 trnQ tRNA trnQ trnQ 7448 7519 -1 72 LSC 0.000000 0 0 95 298 no 0.000000 1 0.000000 NA 1.000000 25.900000 IGS_008 igs trnQ|psbK trnQ-psbK 7520 7891 0 372 LSC 0.002688 1 0 167 209 no 1.000000 2 1.000000 NA 1.000000 53.100000 psbK gene psbK psbK 7892 8071 1 180 LSC 0.000000 0 0 73 29 no 0.000000 1 0.000000 NA 1.000000 20.900000 IGS_009 igs psbK|psbI psbK-psbI 8072 8502 0 431 LSC 0.012019 5 15 253 118 no 1.000000 2 1.000000 NA 0.965197 59.300000 psbI gene psbI psbI 8503 8613 1 111 LSC 0.000000 0 0 32 7 no 0.000000 1 0.000000 NA 1.000000 19.300000 IGS_010 igs psbI|trnS psbI-trnS 8614 8769 0 156 LSC 0.046667 7 6 143 93 yes 1.000000 2 1.000000 NA 0.961538 74.800000 trnS tRNA trnS trnS 8770 8857 -1 88 LSC 0.000000 0 0 23 5 no 0.000000 1 0.000000 NA 1.000000 19.100000 IGS_011 igs trnS|trnC trnS-trnC 8858 9604 0 747 LSC 0.012048 9 0 111 92 no 1.000000 2 1.000000 NA 1.000000 57.600000 trnC tRNA trnC trnC 9605 9675 1 71 LSC 0.000000 0 0 218 21 no 0.000000 1 0.000000 NA 1.000000 20.300000 IGS_012 igs trnC|petN trnC-petN 9676 10493 0 818 LSC 0.018610 15 12 289 300 yes 1.000000 2 1.000000 NA 0.985330 70.800000 petN gene petN petN 10494 10583 1 90 LSC 0.000000 0 0 158 221 no 0.000000 1 0.000000 NA 1.000000 30.600000 IGS_013 igs petN|psbM petN-psbM 10584 11079 0 496 LSC 0.014113 7 0 248 119 no 1.000000 2 1.000000 NA 1.000000 58.600000 psbM gene psbM psbM 11080 11184 -1 105 LSC 0.000000 0 0 87 14 no 0.000000 1 0.000000 NA 1.000000 19.800000 IGS_014 igs psbM|trnD psbM-trnD 11185 11842 0 658 LSC 0.021277 14 0 192 95 yes 1.000000 2 1.000000 NA 1.000000 63.100000 trnD tRNA trnD trnD 11843 11916 -1 74 LSC 0.000000 0 0 60 21 no 0.000000 1 0.000000 NA 1.000000 20.300000 IGS_015 igs trnD|trnY trnD-trnY 11917 12029 0 113 LSC 0.008850 1 0 134 245 no 1.000000 2 1.000000 NA 1.000000 52.600000 trnY tRNA trnY trnY 12030 12113 -1 84 LSC 0.000000 0 0 91 161 no 0.000000 1 0.000000 NA 1.000000 25.600000 IGS_016 igs trnY|trnE trnY-trnE 12114 12292 0 179 LSC 0.005587 1 0 175 111 no 1.000000 2 1.000000 NA 1.000000 49.000000 trnE tRNA trnE trnE 12293 12364 -1 72 LSC 0.000000 0 0 17 39 no 0.000000 1 0.000000 NA 1.000000 20.000000 IGS_017 igs trnE|rpoB trnE-rpoB 12365 13276 0 912 LSC 0.015590 14 14 89 72 yes 1.000000 2 1.000000 NA 0.984649 59.600000 rpoB gene rpoB rpoB 13277 16459 1 3183 LSC 0.004398 14 0 167 300 no 1.000000 2 1.000000 NA 1.000000 55.400000 IGS_018 igs rpoB|rpoC1 rpoB-rpoC1 16460 16464 0 5 LSC 0.000000 0 0 281 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 rpoC1 gene rpoC1 rpoC1 16465 19288 1 2824 LSC 0.004284 12 23 286 92 no 1.000000 2 1.000000 NA 0.991856 51.100000 IGS_019 igs rpoC1|rpoC2 rpoC1-rpoC2 19289 19394 0 106 LSC 0.009434 1 0 9 209 no 1.000000 2 1.000000 NA 1.000000 43.600000 rpoC2 gene rpoC2 rpoC2 19395 23531 1 4137 LSC 0.005560 23 0 13 0 no 1.000000 2 1.000000 NA 1.000000 42.000000 IGS_020 igs rpoC2|rps2 rpoC2-rps2 23532 23820 0 289 LSC 0.013937 4 2 45 169 no 1.000000 2 1.000000 NA 0.993080 49.500000 rps2 gene rps2 rps2 23821 24531 1 711 LSC 0.002813 2 0 14 177 no 1.000000 2 1.000000 NA 1.000000 46.400000 IGS_021 igs rps2|atpI rps2-atpI 24532 24746 0 215 LSC 0.004651 1 0 300 300 no 1.000000 2 1.000000 NA 1.000000 55.200000 atpI gene atpI atpI 24747 25490 1 744 LSC 0.000000 0 0 37 8 no 0.000000 1 0.000000 NA 1.000000 25.600000 IGS_022 igs atpI|atpH atpI-atpH 25491 26660 0 1170 LSC 0.012942 15 11 300 264 yes 1.000000 2 1.000000 NA 0.990598 67.100000 atpH gene atpH atpH 26661 26906 1 246 LSC 0.000000 0 0 87 18 no 0.000000 1 0.000000 NA 1.000000 20.100000 IGS_023 igs atpH|atpF atpH-atpF 26907 27273 0 367 LSC 0.010899 4 0 300 217 no 1.000000 2 1.000000 NA 1.000000 60.200000 atpF gene atpF atpF 27274 28535 1 1262 LSC 0.003170 4 0 60 38 no 1.000000 2 1.000000 NA 1.000000 48.400000 IGS_024 igs atpF|atpA atpF-atpA 28536 28608 0 73 LSC 0.016667 1 13 81 300 no 1.000000 2 1.000000 NA 0.821918 54.000000 atpA gene atpA atpA 28609 30135 1 1527 LSC 0.001310 2 0 34 76 no 1.000000 2 1.000000 NA 1.000000 47.000000 IGS_025 igs atpA|trnR atpA-trnR 30136 30253 0 118 LSC 0.016949 2 0 135 300 no 1.000000 2 1.000000 NA 1.000000 57.400000 trnR tRNA trnR trnR 30254 30325 -1 72 LSC 0.000000 0 0 16 300 no 0.000000 1 0.000000 NA 1.000000 20.000000 IGS_026 igs trnR|trnG-UCC trnR-trnG-UCC 30326 30536 0 211 LSC 0.000000 0 23 88 183 no 1.000000 2 1.000000 NA 0.890995 47.300000 trnG-UCC_part1 tRNA trnG-UCC trnG-UCC 30537 30583 1 47 LSC 0.000000 0 0 299 136 no 0.000000 1 0.000000 NA 1.000000 28.900000 trnG-UCC_part2 tRNA trnG-UCC trnG-UCC 31323 31345 1 23 LSC 0.000000 0 0 140 134 no 0.000000 1 0.000000 NA 1.000000 28.800000 IGS_029 igs trnG-UCC|trnT trnG-UCC-trnT 31346 31481 0 136 LSC 0.007353 1 0 163 54 no 1.000000 2 1.000000 NA 1.000000 45.800000 trnT tRNA trnT trnT 31482 31563 1 82 LSC 0.012346 1 1 1 207 no 1.000000 2 1.000000 NA 0.987805 45.800000 IGS_030 igs trnT|psbD trnT-psbD 31564 32771 0 1208 LSC 0.009378 11 35 27 215 no 1.000000 2 1.000000 NA 0.971026 53.900000 psbD gene psbD psbD 32772 33833 1 1062 LSC 0.001883 2 0 97 291 no 1.000000 2 1.000000 NA 1.000000 52.100000 psbC gene psbC psbC 33781 35202 1 1422 LSC 0.000703 1 0 91 61 no 1.000000 2 1.000000 NA 1.000000 48.700000 IGS_032 igs psbC|trnS psbC-trnS 35203 35462 0 260 LSC 0.004049 1 13 300 205 no 1.000000 2 1.000000 NA 0.950000 59.600000 trnS tRNA trnS trnS 35463 35537 -1 75 LSC 0.000000 0 0 198 130 no 0.000000 1 0.000000 NA 1.000000 28.500000 IGS_033 igs trnS|psbZ trnS-psbZ 35538 35876 0 339 LSC 0.023599 8 0 273 300 yes 1.000000 2 1.000000 NA 1.000000 66.900000 psbZ gene psbZ psbZ 35877 36065 1 189 LSC 0.000000 0 0 77 117 no 0.000000 1 0.000000 NA 1.000000 24.500000 IGS_034 igs psbZ|trnG psbZ-trnG 36066 36390 0 325 LSC 0.018462 6 0 266 297 no 1.000000 2 1.000000 NA 1.000000 63.600000 trnG tRNA trnG trnG 36391 36461 1 71 LSC 0.000000 0 0 60 226 no 0.000000 1 0.000000 NA 1.000000 23.200000 IGS_035 igs trnG|trnfM trnG-trnfM 36462 36665 0 204 LSC 0.000000 0 0 131 22 no 0.000000 1 0.000000 NA 1.000000 20.400000 trnfM tRNA trnfM trnfM 36666 36739 -1 74 LSC 0.013514 1 0 300 300 no 1.000000 2 1.000000 NA 1.000000 60.300000 IGS_036 igs trnfM|rps14 trnfM-rps14 36740 36893 0 154 LSC 0.000000 0 0 51 300 no 0.000000 1 0.000000 NA 1.000000 22.600000 rps14 gene rps14 rps14 36894 37196 -1 303 LSC 0.000000 0 0 205 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_037 igs rps14|psaB rps14-psaB 37197 37329 0 133 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 psaB gene psaB psaB 37330 39534 -1 2205 LSC 0.000454 1 0 300 300 no 1.000000 2 1.000000 NA 1.000000 57.500000 IGS_038 igs psaB|psaA psaB-psaA 39535 39559 0 25 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 psaA gene psaA psaA 39560 41812 -1 2253 LSC 0.000888 2 0 300 65 no 1.000000 2 1.000000 NA 1.000000 47.600000 IGS_039 igs psaA|ycf3 psaA-ycf3 41813 42553 0 741 LSC 0.008097 6 0 300 300 no 1.000000 2 1.000000 NA 1.000000 63.400000 ycf3 gene ycf3 ycf3 42554 44530 -1 1977 LSC 0.003541 7 0 154 30 no 1.000000 2 1.000000 NA 1.000000 47.000000 IGS_040 igs ycf3|trnS ycf3-trnS 44531 45374 0 844 LSC 0.011848 10 0 300 105 no 1.000000 2 1.000000 NA 1.000000 58.400000 trnS tRNA trnS trnS 45375 45453 1 79 LSC 0.000000 0 0 59 26 no 0.000000 1 0.000000 NA 1.000000 20.700000 IGS_041 igs trnS|rps4 trnS-rps4 45454 45767 0 314 LSC 0.012739 4 0 138 300 no 1.000000 2 1.000000 NA 1.000000 55.500000 rps4 gene rps4 rps4 45768 46373 -1 606 LSC 0.000000 0 0 35 54 no 0.000000 1 0.000000 NA 1.000000 27.600000 IGS_042 igs rps4|trnT rps4-trnT 46374 46740 0 367 LSC 0.008696 3 22 300 115 no 1.000000 2 1.000000 NA 0.940054 57.000000 trnT tRNA trnT trnT 46741 46813 -1 73 LSC 0.000000 0 0 55 42 no 0.000000 1 0.000000 NA 1.000000 21.900000 IGS_043 igs trnT|trnL trnT-trnL 46814 47385 0 572 LSC 0.016158 9 15 128 140 no 1.000000 2 1.000000 NA 0.973776 64.500000 trnL_part1 tRNA trnL trnL 47386 47420 1 35 LSC 0.000000 0 0 17 105 no 0.000000 1 0.000000 NA 1.000000 20.000000 trnL_part2 tRNA trnL trnL 47857 47906 1 50 LSC 0.000000 0 0 300 6 no 0.000000 1 0.000000 NA 1.000000 19.200000 IGS_046 igs trnL|trnF trnL-trnF 47907 48256 0 350 LSC 0.011461 4 1 300 300 no 1.000000 2 1.000000 NA 0.997143 60.400000 trnF tRNA trnF trnF 48257 48329 1 73 LSC 0.000000 0 0 20 300 no 0.000000 1 0.000000 NA 1.000000 20.200000 IGS_047 igs trnF|ndhJ trnF-ndhJ 48330 48566 0 237 LSC 0.000000 0 6 93 191 no 1.000000 2 1.000000 NA 0.974684 46.900000 ndhJ gene ndhJ ndhJ 48567 49043 -1 477 LSC 0.006289 3 0 300 26 no 1.000000 2 1.000000 NA 1.000000 46.800000 IGS_048 igs ndhJ|ndhK ndhJ-ndhK 49044 49146 0 103 LSC 0.009709 1 0 97 300 no 1.000000 2 1.000000 NA 1.000000 50.400000 ndhK gene ndhK ndhK 49147 49824 -1 678 LSC 0.000000 0 0 76 120 no 0.000000 1 0.000000 NA 1.000000 30.700000 IGS_049 igs ndhK|ndhC ndhK-ndhC 49825 49875 0 51 LSC 0.000000 0 0 300 69 no 0.000000 1 0.000000 NA 1.000000 23.900000 ndhC gene ndhC ndhC 49876 50238 -1 363 LSC 0.005510 2 0 300 129 no 1.000000 2 1.000000 NA 1.000000 51.700000 IGS_050 igs ndhC|trnV ndhC-trnV 50239 51266 0 1028 LSC 0.010638 5 558 227 300 no 1.000000 2 1.000000 NA 0.457198 57.400000 trnV_part2 tRNA trnV trnV 51267 51301 -1 35 LSC 0.000000 0 0 37 300 no 0.000000 1 0.000000 NA 1.000000 21.500000 trnV_part1 tRNA trnV trnV 51878 51915 -1 38 LSC 0.000000 0 0 119 56 no 0.000000 1 0.000000 NA 1.000000 22.900000 IGS_053 igs trnV|trnM trnV-trnM 51916 52090 0 175 LSC 0.011429 2 0 157 125 no 1.000000 2 1.000000 NA 1.000000 53.400000 trnM tRNA trnM trnM 52091 52163 1 73 LSC 0.000000 0 0 28 52 no 0.000000 1 0.000000 NA 1.000000 20.900000 IGS_054 igs trnM|atpE trnM-atpE 52164 52371 0 208 LSC 0.009852 2 5 101 300 no 1.000000 2 1.000000 NA 0.975962 53.000000 atpE gene atpE atpE 52372 52773 -1 402 LSC 0.000000 0 0 70 122 no 0.000000 1 0.000000 NA 1.000000 26.100000 atpB gene atpB atpB 52770 54266 -1 1497 LSC 0.003340 5 0 300 120 no 1.000000 2 1.000000 NA 1.000000 54.700000 IGS_056 igs atpB|rbcL atpB-rbcL 54267 55026 0 760 LSC 0.006878 5 33 4 95 no 1.000000 2 1.000000 NA 0.956579 52.200000 rbcL gene rbcL rbcL 55027 56484 1 1458 LSC 0.004801 7 0 16 228 no 1.000000 2 1.000000 NA 1.000000 47.700000 IGS_057 igs rbcL|accD rbcL-accD 56485 57040 0 556 LSC 0.005587 3 19 300 99 no 1.000000 2 1.000000 NA 0.965827 56.800000 accD gene accD accD 57041 58483 1 1443 LSC 0.004851 7 0 157 213 no 1.000000 2 1.000000 NA 1.000000 58.300000 IGS_058 igs accD|psaI accD-psaI 58484 59240 0 757 LSC 0.009563 7 25 300 44 no 1.000000 2 1.000000 NA 0.966975 55.700000 psaI gene psaI psaI 59241 59351 1 111 LSC 0.009009 1 0 128 51 no 1.000000 2 1.000000 NA 1.000000 46.500000 IGS_059 igs psaI|ycf4 psaI-ycf4 59352 59741 0 390 LSC 0.002564 1 0 66 300 no 1.000000 2 1.000000 NA 1.000000 45.800000 ycf4 gene ycf4 ycf4 59742 60296 1 555 LSC 0.003604 2 0 300 179 no 1.000000 2 1.000000 NA 1.000000 58.300000 IGS_060 igs ycf4|cemA ycf4-cemA 60297 61187 0 891 LSC 0.011561 10 26 145 77 no 1.000000 2 1.000000 NA 0.970819 59.000000 cemA gene cemA cemA 61188 61877 1 690 LSC 0.004348 3 0 44 170 no 1.000000 2 1.000000 NA 1.000000 49.500000 IGS_061 igs cemA|petA cemA-petA 61878 62103 0 226 LSC 0.004425 1 0 45 92 no 1.000000 2 1.000000 NA 1.000000 43.400000 petA gene petA petA 62104 63066 1 963 LSC 0.007269 7 0 55 37 no 1.000000 2 1.000000 NA 1.000000 50.700000 IGS_062 igs petA|psbJ petA-psbJ 63067 63854 0 788 LSC 0.015248 12 1 180 300 yes 1.000000 2 1.000000 NA 0.998731 66.100000 psbJ gene psbJ psbJ 63855 63977 -1 123 LSC 0.000000 0 0 102 300 no 0.000000 1 0.000000 NA 1.000000 26.400000 IGS_063 igs psbJ|psbL psbJ-psbL 63978 64125 0 148 LSC 0.000000 0 0 225 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 psbL gene psbL psbL 64126 64242 -1 117 LSC 0.000000 0 0 300 226 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_064 igs psbL|psbF psbL-psbF 64243 64264 0 22 LSC 0.000000 0 0 300 204 no 0.000000 1 0.000000 NA 1.000000 33.800000 psbF gene psbF psbF 64265 64384 -1 120 LSC 0.000000 0 0 300 84 no 0.000000 1 0.000000 NA 1.000000 25.100000 IGS_065 igs psbF|psbE psbF-psbE 64385 64393 0 9 LSC 0.000000 0 0 300 75 no 0.000000 1 0.000000 NA 1.000000 24.400000 psbE gene psbE psbE 64394 64645 -1 252 LSC 0.003968 1 0 300 2 no 1.000000 2 1.000000 NA 1.000000 39.900000 IGS_066 igs psbE|petL psbE-petL 64646 65931 0 1286 LSC 0.011290 14 46 176 131 no 1.000000 2 1.000000 NA 0.964230 63.500000 petL gene petL petL 65932 66027 1 96 LSC 0.000000 0 0 147 35 no 0.000000 1 0.000000 NA 1.000000 21.400000 IGS_067 igs petL|petG petL-petG 66028 66192 0 165 LSC 0.018182 3 0 243 138 no 1.000000 2 1.000000 NA 1.000000 58.300000 petG gene petG petG 66193 66306 1 114 LSC 0.000000 0 0 62 24 no 0.000000 1 0.000000 NA 1.000000 20.600000 IGS_068 igs petG|trnW petG-trnW 66307 66440 0 134 LSC 0.007812 1 6 176 300 no 1.000000 2 1.000000 NA 0.955224 59.500000 trnW tRNA trnW trnW 66441 66514 -1 74 LSC 0.000000 0 0 109 300 no 0.000000 1 0.000000 NA 1.000000 26.900000 IGS_069 igs trnW|trnP trnW-trnP 66515 66692 0 178 LSC 0.000000 0 16 183 146 no 1.000000 2 1.000000 NA 0.910112 52.200000 trnP tRNA trnP trnP 66693 66766 -1 74 LSC 0.000000 0 0 300 72 no 0.000000 1 0.000000 NA 1.000000 24.100000 IGS_070 igs trnP|psaJ trnP-psaJ 66767 67086 0 320 LSC 0.015625 5 0 300 28 no 1.000000 2 1.000000 NA 1.000000 49.000000 psaJ gene psaJ psaJ 67087 67215 1 129 LSC 0.007752 1 0 49 26 no 1.000000 2 1.000000 NA 1.000000 43.900000 IGS_071 igs psaJ|rpl33 psaJ-rpl33 67216 67628 0 413 LSC 0.007264 3 0 100 300 no 1.000000 2 1.000000 NA 1.000000 51.500000 rpl33 gene rpl33 rpl33 67629 67829 1 201 LSC 0.000000 0 0 207 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_072 igs rpl33|rps18 rpl33-rps18 67830 68005 0 176 LSC 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 rps18 gene rps18 rps18 68006 68311 1 306 LSC 0.000000 0 0 300 24 no 0.000000 1 0.000000 NA 1.000000 20.700000 IGS_073 igs rps18|rpl20 rps18-rpl20 68312 68559 0 248 LSC 0.008065 2 0 300 195 no 1.000000 2 1.000000 NA 1.000000 56.800000 rpl20 gene rpl20 rpl20 68560 68940 -1 381 LSC 0.002625 1 0 5 167 no 1.000000 2 1.000000 NA 1.000000 41.100000 IGS_074 igs rpl20|rps12 rpl20-rps12 68941 69676 0 736 LSC 0.006793 5 0 185 15 no 1.000000 2 1.000000 NA 1.000000 48.800000 rps12_part1 gene rps12 rps12 69677 69790 -1 114 LSC 0.008772 1 0 115 54 no 1.000000 2 1.000000 NA 1.000000 46.600000 IGS_075 igs rps12|clpP rps12-clpP 69791 69945 0 155 LSC 0.012903 2 0 98 170 no 1.000000 2 1.000000 NA 1.000000 52.300000 clpP gene clpP clpP 69946 71972 -1 2027 LSC 0.010443 21 16 48 144 no 1.000000 2 1.000000 NA 0.992107 53.000000 IGS_076 igs clpP|psbB clpP-psbB 71973 72455 0 483 LSC 0.012793 6 14 219 225 yes 1.000000 2 1.000000 NA 0.971014 66.400000 psbB gene psbB psbB 72456 73982 1 1527 LSC 0.001965 3 0 71 2 no 1.000000 2 1.000000 NA 1.000000 45.000000 IGS_077 igs psbB|psbT psbB-psbT 73983 74146 0 164 LSC 0.018293 3 0 78 300 no 1.000000 2 1.000000 NA 1.000000 53.900000 psbT gene psbT psbT 74147 74248 1 102 LSC 0.000000 0 0 109 300 no 0.000000 1 0.000000 NA 1.000000 26.900000 IGS_078 igs psbT|psbN psbT-psbN 74249 74321 0 73 LSC 0.000000 0 0 211 277 no 0.000000 1 0.000000 NA 1.000000 33.800000 psbN gene psbN psbN 74322 74453 -1 132 LSC 0.000000 0 0 284 145 no 0.000000 1 0.000000 NA 1.000000 29.600000 IGS_079 igs psbN|psbH psbN-psbH 74454 74555 0 102 LSC 0.000000 0 0 300 43 no 0.000000 1 0.000000 NA 1.000000 22.000000 psbH gene psbH psbH 74556 74777 1 222 LSC 0.013514 3 0 300 43 no 1.000000 2 1.000000 NA 1.000000 48.500000 IGS_080 igs psbH|petB psbH-petB 74778 74919 0 142 LSC 0.014085 2 0 174 82 no 1.000000 2 1.000000 NA 1.000000 51.700000 petB gene petB petB 74920 76340 1 1421 LSC 0.004926 7 0 82 37 no 1.000000 2 1.000000 NA 1.000000 49.400000 IGS_081 igs petB|petD petB-petD 76341 76547 0 207 LSC 0.004950 1 5 300 171 no 1.000000 2 1.000000 NA 0.975845 55.500000 petD gene petD petD 76548 77752 1 1205 LSC 0.006639 8 0 169 31 no 1.000000 2 1.000000 NA 1.000000 49.900000 IGS_082 igs petD|rpoA petD-rpoA 77753 77946 0 194 LSC 0.020725 4 1 123 145 no 1.000000 2 1.000000 NA 0.994845 59.100000 rpoA gene rpoA rpoA 77947 78954 -1 1008 LSC 0.006944 7 0 28 268 no 1.000000 2 1.000000 NA 1.000000 49.800000 IGS_083 igs rpoA|rps11 rpoA-rps11 78955 79051 0 97 LSC 0.000000 0 0 89 171 no 0.000000 1 0.000000 NA 1.000000 25.400000 rps11 gene rps11 rps11 79052 79462 -1 411 LSC 0.004866 2 0 186 66 no 1.000000 2 1.000000 NA 1.000000 47.600000 IGS_084 igs rps11|rpl36 rps11-rpl36 79463 79561 0 99 LSC 0.010101 1 0 16 300 no 1.000000 2 1.000000 NA 1.000000 44.500000 rpl36 gene rpl36 rpl36 79562 79675 -1 114 LSC 0.000000 0 0 32 300 no 0.000000 1 0.000000 NA 1.000000 21.100000 IGS_085 igs rpl36|infA rpl36-infA 79676 79789 0 114 LSC 0.000000 0 0 146 276 no 0.000000 1 0.000000 NA 1.000000 29.700000 infA gene infA infA 79790 80023 -1 234 LSC 0.000000 0 0 260 42 no 0.000000 1 0.000000 NA 1.000000 21.900000 IGS_086 igs infA|rps8 infA-rps8 80024 80150 0 127 LSC 0.007874 1 0 300 150 no 1.000000 2 1.000000 NA 1.000000 53.300000 rps8 gene rps8 rps8 80151 80555 -1 405 LSC 0.004938 2 0 84 240 no 1.000000 2 1.000000 NA 1.000000 48.800000 IGS_087 igs rps8|rpl14 rps8-rpl14 80556 80735 0 180 LSC 0.000000 0 0 168 60 no 0.000000 1 0.000000 NA 1.000000 23.200000 rpl14 gene rpl14 rpl14 80736 81104 -1 369 LSC 0.002710 1 0 300 131 no 1.000000 2 1.000000 NA 1.000000 50.300000 IGS_088 igs rpl14|rpl16 rpl14-rpl16 81105 81229 0 125 LSC 0.000000 0 18 300 6 no 1.000000 2 1.000000 NA 0.856000 40.100000 rpl16 gene rpl16 rpl16 81230 82662 -1 1433 LSC 0.011947 17 10 300 9 no 1.000000 2 1.000000 NA 0.993022 52.000000 IGS_089 igs rpl16|rps3 rpl16-rps3 82663 82829 0 167 LSC 0.032258 5 12 169 86 yes 1.000000 2 1.000000 NA 0.928144 66.400000 rps3 gene rps3 rps3 82830 83486 -1 657 LSC 0.004566 3 0 50 39 no 1.000000 2 1.000000 NA 1.000000 49.300000 rpl22 gene rpl22 rpl22 83471 83935 -1 465 LSC 0.002151 1 0 27 62 no 1.000000 2 1.000000 NA 1.000000 44.200000 IGS_091 igs rpl22|rps19 rpl22-rps19 83936 84007 0 72 LSC 0.013889 1 0 300 271 no 1.000000 2 1.000000 NA 1.000000 60.500000 rps19 gene rps19 rps19 84008 84286 -1 279 LSC 0.003584 1 0 9 24 no 1.000000 2 1.000000 NA 1.000000 40.200000 IGS_092 igs rps19|rpl2 rps19-rpl2 84287 84364 0 78 IRb 0.126761 9 7 7 45 yes 1.000000 2 1.000000 NA 0.910256 76.800000 rpl2 gene rpl2 rpl2 84365 85851 -1 1487 IRb 0.002017 3 0 11 300 no 1.000000 2 1.000000 NA 1.000000 45.700000 IGS_093 igs rpl2|rpl23 rpl2-rpl23 85852 85869 0 18 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 rpl23 gene rpl23 rpl23 85870 86151 -1 282 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_094 igs rpl23|trnI rpl23-trnI 86152 86316 0 165 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_095 igs trnI|ycf2 trnI-ycf2 86391 86501 0 111 IRb 0.000000 0 0 300 242 no 0.000000 1 0.000000 NA 1.000000 33.800000 ycf2 gene ycf2 ycf2 86502 93305 1 6804 IRb 0.002499 17 0 300 123 no 1.000000 2 1.000000 NA 1.000000 48.200000 IGS_096 igs ycf2|trnL ycf2-trnL 93306 93726 0 421 IRb 0.002375 1 0 300 231 no 1.000000 2 1.000000 NA 1.000000 56.400000 IGS_097 igs trnL|ndhB trnL-ndhB 93808 94366 0 559 IRb 0.001789 1 0 300 300 no 1.000000 2 1.000000 NA 1.000000 58.900000 ndhB gene ndhB ndhB 94367 96569 -1 2203 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 38.500000 IGS_098 igs ndhB|rps7 ndhB-rps7 96570 96858 0 289 IRb 0.000000 0 0 300 150 no 0.000000 1 0.000000 NA 1.000000 30.000000 rps7 gene rps7 rps7 96859 97326 -1 468 IRb 0.002137 1 0 300 300 no 1.000000 2 1.000000 NA 1.000000 57.200000 IGS_099 igs rps7|rps12 rps7-rps12 97327 97379 0 53 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 rps12_part2 gene rps12 rps12 97380 98172 -1 793 IRb 0.001261 1 0 300 300 no 1.000000 2 1.000000 NA 1.000000 59.500000 IGS_100 igs rps12|ycf15 rps12-ycf15 98173 99198 0 1026 IRb 0.002924 3 0 300 105 no 1.000000 2 1.000000 NA 1.000000 53.300000 ycf15 gene ycf15 ycf15 99199 99360 -1 162 IRb 0.006173 1 0 52 188 no 1.000000 2 1.000000 NA 1.000000 44.900000 IGS_101 igs ycf15|trnV ycf15-trnV 99361 100059 0 699 IRb 0.001431 1 0 56 300 no 1.000000 2 1.000000 NA 1.000000 48.800000 IGS_102 igs trnV|rrn16 trnV-rrn16 100132 100357 0 226 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 rrn16 rRNA rrn16 rrn16 100358 101848 1 1491 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 40.000000 IGS_103 igs rrn16|trnI rrn16-trnI 101849 102141 0 293 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 trnI_part1 tRNA trnI trnI 102142 102178 1 37 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 trnI_part2 tRNA trnI trnI 102959 102993 1 35 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_106 igs trnI|trnA trnI-trnA 102994 103057 0 64 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 trnA_part1 tRNA trnA trnA 103058 103095 1 38 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 trnA_part2 tRNA trnA trnA 103911 103945 1 35 IRb 0.000000 0 0 191 300 no 0.000000 1 0.000000 NA 1.000000 33.100000 IGS_109 igs trnA|rrn23 trnA-rrn23 103946 104097 0 152 IRb 0.000000 0 0 226 285 no 0.000000 1 0.000000 NA 1.000000 33.800000 rrn23 rRNA rrn23 rrn23 104098 106907 1 2810 IRb 0.000356 1 0 300 300 no 1.000000 2 1.000000 NA 1.000000 56.200000 IGS_110 igs rrn23|rrn4.5 rrn23-rrn4.5 106908 107005 0 98 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 rrn4.5 rRNA rrn4.5 rrn4.5 107006 107108 1 103 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_111 igs rrn4.5|rrn5 rrn4.5-rrn5 107109 107353 0 245 IRb 0.000000 0 0 300 175 no 0.000000 1 0.000000 NA 1.000000 31.900000 rrn5 rRNA rrn5 rrn5 107354 107474 1 121 IRb 0.000000 0 0 300 54 no 0.000000 1 0.000000 NA 1.000000 22.800000 IGS_112 igs rrn5|trnR rrn5-trnR 107475 107755 0 281 IRb 0.015385 4 21 300 217 yes 1.000000 2 1.000000 NA 0.925267 65.400000 trnR tRNA trnR trnR 107756 107829 1 74 IRb 0.000000 0 0 222 143 no 0.000000 1 0.000000 NA 1.000000 29.500000 IGS_113 igs trnR|trnN trnR-trnN 107830 108300 0 471 IRb 0.004246 2 0 296 300 no 1.000000 2 1.000000 NA 1.000000 58.500000 trnN tRNA trnN trnN 108301 108372 -1 72 IRb 0.000000 0 0 193 300 no 0.000000 1 0.000000 NA 1.000000 33.200000 IGS_114 igs trnN|ycf1 trnN-ycf1 108373 108699 0 327 IRb 0.000000 0 0 265 300 no 0.000000 1 0.000000 NA 1.000000 34.300000 ycf1 gene ycf1 ycf1 108700 113850 1 5151 SSC 0.023458 119 78 300 82 yes 1.000000 2 1.000000 NA 0.984857 58.600000 IGS_115 igs ycf1|rps15 ycf1-rps15 113851 114238 0 388 SSC 0.005155 2 0 166 42 no 1.000000 2 1.000000 NA 1.000000 45.400000 rps15 gene rps15 rps15 114239 114517 1 279 SSC 0.007168 2 0 170 300 no 1.000000 2 1.000000 NA 1.000000 54.400000 IGS_116 igs rps15|ndhH rps15-ndhH 114518 114551 0 34 SSC 0.000000 0 0 173 300 no 0.000000 1 0.000000 NA 1.000000 31.700000 ndhH gene ndhH ndhH 114552 115790 1 1239 SSC 0.003228 4 0 207 19 no 1.000000 2 1.000000 NA 1.000000 47.000000 IGS_117 igs ndhH|ndhA ndhH-ndhA 115791 115791 0 1 SSC 0.000000 0 0 111 18 no 0.000000 1 0.000000 NA 1.000000 20.100000 ndhA gene ndhA ndhA 115792 117916 1 2125 SSC 0.005650 12 1 112 20 no 1.000000 2 1.000000 NA 0.999529 47.200000 IGS_118 igs ndhA|ndhI ndhA-ndhI 117917 117994 0 78 SSC 0.013514 1 4 135 46 no 1.000000 2 1.000000 NA 0.948718 53.400000 ndhI gene ndhI ndhI 117995 118495 1 501 SSC 0.001996 1 0 57 201 no 1.000000 2 1.000000 NA 1.000000 47.100000 IGS_119 igs ndhI|ndhG ndhI-ndhG 118496 118858 0 363 SSC 0.002755 1 0 300 300 no 1.000000 2 1.000000 NA 1.000000 55.400000 ndhG gene ndhG ndhG 118859 119389 1 531 SSC 0.001883 1 0 161 50 no 1.000000 2 1.000000 NA 1.000000 47.100000 IGS_120 igs ndhG|ndhE ndhG-ndhE 119390 119582 0 193 SSC 0.010363 2 0 222 62 no 1.000000 2 1.000000 NA 1.000000 48.100000 ndhE gene ndhE ndhE 119583 119888 1 306 SSC 0.003268 1 0 112 14 no 1.000000 2 1.000000 NA 1.000000 40.600000 IGS_121 igs ndhE|psaC ndhE-psaC 119889 120126 0 238 SSC 0.016807 4 0 243 53 no 1.000000 2 1.000000 NA 1.000000 51.100000 psaC gene psaC psaC 120127 120372 1 246 SSC 0.004065 1 0 97 13 yes 1.000000 2 1.000000 NA 1.000000 40.800000 IGS_122 igs psaC|ndhD psaC-ndhD 120373 120463 0 91 SSC 0.112360 10 2 192 117 yes 1.000000 2 1.000000 NA 0.978022 83.400000 ndhD gene ndhD ndhD 120464 121993 1 1530 SSC 0.002614 4 0 12 1 no 1.000000 2 1.000000 NA 1.000000 45.300000 IGS_123 igs ndhD|ccsA ndhD-ccsA 121994 122211 0 218 SSC 0.009174 2 0 39 300 no 1.000000 2 1.000000 NA 1.000000 45.700000 ccsA gene ccsA ccsA 122212 123174 -1 963 SSC 0.003115 3 0 89 39 no 1.000000 2 1.000000 NA 1.000000 48.500000 IGS_124 igs ccsA|trnL ccsA-trnL 123175 123281 0 107 SSC 0.009346 1 0 139 132 no 1.000000 2 1.000000 NA 1.000000 52.800000 IGS_125 igs trnL|rpl32 trnL-rpl32 123362 124097 0 736 SSC 0.015068 11 6 147 69 no 1.000000 2 1.000000 NA 0.991848 58.400000 rpl32 gene rpl32 rpl32 124098 124262 -1 165 SSC 0.006061 1 0 98 51 no 1.000000 2 1.000000 NA 1.000000 44.800000 IGS_126 igs rpl32|ndhF rpl32-ndhF 124263 125063 0 801 SSC 0.016435 13 10 95 91 yes 1.000000 2 1.000000 NA 0.987516 61.200000 ndhF gene ndhF ndhF 125064 127295 1 2232 SSC 0.007168 16 0 300 12 yes 1.000000 2 1.000000 NA 1.000000 47.200000 IGS_127 igs ndhF|trnN ndhF-trnN 127296 128239 0 944 IRa 0.007415 7 0 5 265 no 1.000000 2 1.000000 NA 1.000000 48.400000 trnN tRNA trnN trnN 128240 128311 1 72 IRa 0.000000 0 0 300 193 no 0.000000 1 0.000000 NA 1.000000 33.200000 IGS_128 igs trnN|trnR trnN-trnR 128312 128782 0 471 IRa 0.004246 2 0 300 296 no 1.000000 2 1.000000 NA 1.000000 58.500000 trnR tRNA trnR trnR 128783 128856 -1 74 IRa 0.000000 0 0 143 222 no 0.000000 1 0.000000 NA 1.000000 29.500000 IGS_129 igs trnR|rrn5 trnR-rrn5 128857 129137 0 281 IRa 0.015385 4 21 217 300 yes 1.000000 2 1.000000 NA 0.925267 65.400000 rrn5 rRNA rrn5 rrn5 129138 129258 -1 121 IRa 0.000000 0 0 54 300 no 0.000000 1 0.000000 NA 1.000000 22.800000 IGS_130 igs rrn5|rrn4.5 rrn5-rrn4.5 129259 129503 0 245 IRa 0.000000 0 0 175 300 no 0.000000 1 0.000000 NA 1.000000 31.900000 rrn4.5 rRNA rrn4.5 rrn4.5 129504 129606 -1 103 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_131 igs rrn4.5|rrn23 rrn4.5-rrn23 129607 129704 0 98 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 rrn23 rRNA rrn23 rrn23 129705 132514 -1 2810 IRa 0.000356 1 0 300 300 no 1.000000 2 1.000000 NA 1.000000 56.200000 IGS_132 igs rrn23|trnA rrn23-trnA 132515 132666 0 152 IRa 0.000000 0 0 285 226 no 0.000000 1 0.000000 NA 1.000000 33.800000 trnA_part2 tRNA trnA trnA 132667 132701 -1 35 IRa 0.000000 0 0 300 191 no 0.000000 1 0.000000 NA 1.000000 33.100000 trnA_part1 tRNA trnA trnA 133517 133554 -1 38 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_135 igs trnA|trnI trnA-trnI 133555 133618 0 64 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 trnI_part2 tRNA trnI trnI 133619 133653 -1 35 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 trnI_part1 tRNA trnI trnI 134434 134470 -1 37 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_138 igs trnI|rrn16 trnI-rrn16 134471 134763 0 293 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 rrn16 rRNA rrn16 rrn16 134764 136254 -1 1491 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 40.000000 IGS_139 igs rrn16|trnV rrn16-trnV 136255 136480 0 226 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_140 igs trnV|ycf15 trnV-ycf15 136553 137251 0 699 IRa 0.001431 1 0 300 56 no 1.000000 2 1.000000 NA 1.000000 48.800000 ycf15 gene ycf15 ycf15 137252 137413 1 162 IRa 0.006173 1 0 188 52 no 1.000000 2 1.000000 NA 1.000000 44.900000 IGS_141 igs ycf15|rps12 ycf15-rps12 137414 138439 0 1026 IRa 0.002924 3 0 105 300 no 1.000000 2 1.000000 NA 1.000000 53.300000 rps12_part2 gene rps12 rps12 138440 139232 1 793 IRa 0.001261 1 0 300 300 no 1.000000 2 1.000000 NA 1.000000 59.500000 IGS_142 igs rps12|rps7 rps12-rps7 139233 139285 0 53 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 rps7 gene rps7 rps7 139286 139753 1 468 IRa 0.002137 1 0 300 300 no 1.000000 2 1.000000 NA 1.000000 57.200000 IGS_143 igs rps7|ndhB rps7-ndhB 139754 140042 0 289 IRa 0.000000 0 0 150 300 no 0.000000 1 0.000000 NA 1.000000 30.000000 ndhB gene ndhB ndhB 140043 142245 1 2203 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 38.500000 IGS_144 igs ndhB|trnL ndhB-trnL 142246 142804 0 559 IRa 0.001789 1 0 300 300 no 1.000000 2 1.000000 NA 1.000000 58.900000 IGS_145 igs trnL|ycf2 trnL-ycf2 142886 143306 0 421 IRa 0.002375 1 0 231 300 no 1.000000 2 1.000000 NA 1.000000 56.400000 ycf2 gene ycf2 ycf2 143307 150110 -1 6804 IRa 0.002499 17 0 123 300 no 1.000000 2 1.000000 NA 1.000000 48.200000 IGS_146 igs ycf2|trnI ycf2-trnI 150111 150221 0 111 IRa 0.000000 0 0 242 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_147 igs trnI|rpl23 trnI-rpl23 150296 150460 0 165 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 rpl23 gene rpl23 rpl23 150461 150742 1 282 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_148 igs rpl23|rpl2 rpl23-rpl2 150743 150760 0 18 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 rpl2 gene rpl2 rpl2 150761 152247 1 1487 IRa 0.002017 3 0 300 11 yes 1.000000 2 1.000000 NA 1.000000 45.700000 IGS_149 igs rpl2|trnH rpl2-trnH 152248 118 0 293 IRa 0.060241 10 127 45 88 no 1.000000 2 1.000000 NA 0.566553 62.200000