primer_id label_name rank fwd_seq rev_seq fwd_len rev_len fwd_gc rev_gc fwd_tm rev_tm fwd_self_any_th rev_self_any_th primer3_penalty target_start target_end amplicon_size cross_species_success_rate primer_score trnK-UUU-rbcL_p1 trnK-UUU-rbcL 1 TGGAGTCGCACTTAAAAGCC AGTCCTGAATTAGCTGCTGC 20 20 50.0 50.0 58.5 58.0 0.0 13.4 0.516122 4491 5528 1155-1161 1.000000 77.5 trnK-UUU-rbcL_p2 trnK-UUU-rbcL 2 AACCCTACCGATGGTATGGA AGTCCTGAATTAGCTGCTGC 20 20 50.0 50.0 57.5 58.0 20.0 13.4 0.517944 4491 5528 1208-1214 1.000000 77.4 trnK-UUU-rbcL_p3 trnK-UUU-rbcL 3 AGTCGTGGTCTTACAAACCC AGTCCTGAATTAGCTGCTGC 20 20 50.0 50.0 57.5 58.0 0.0 13.4 0.574042 4491 5528 1223-1229 1.000000 77.0 trnK-UUU-rbcL_p4 trnK-UUU-rbcL 4 GTCGTGGTCTTACAAACCCT AGTCCTGAATTAGCTGCTGC 20 20 50.0 50.0 57.5 58.0 0.0 13.4 0.574042 4491 5528 1222-1228 1.000000 77.0 trnK-UUU-rbcL_p5 trnK-UUU-rbcL 5 AGTCGCACTTAAAAGCCGAG AGTCCTGAATTAGCTGCTGC 20 20 50.0 50.0 58.6 58.0 6.4 13.4 0.606067 4491 5528 1152-1158 1.000000 76.8 trnL-UAA-trnT-UGU_p1 trnL-UAA-trnT-UGU 1 ACCAATTTCGCCATATCCCC GCGATGCTCTAACCTCTGAG 20 20 50.0 55.0 58.0 57.9 0.0 0.0 0.137364 14505 16062 1592-1608 1.000000 82.3 trnL-UAA-trnT-UGU_p2 trnL-UAA-trnT-UGU 2 TAGCGTCTACCAATTTCGCC GCGATGCTCTAACCTCTGAG 20 20 50.0 55.0 58.1 57.9 0.0 0.0 0.202173 14505 16062 1600-1616 1.000000 81.7 trnL-UAA-trnT-UGU_p3 trnL-UAA-trnT-UGU 3 ACCAATTTCGCCATATCCCC GGAATCGAACCGATGACCAT 20 20 50.0 50.0 58.0 57.8 0.0 15.5 0.245117 14505 16062 1624-1640 1.000000 81.3 trnL-UAA-trnT-UGU_p4 trnL-UAA-trnT-UGU 4 TAGCGTCTACCAATTTCGCC GGAATCGAACCGATGACCAT 20 20 50.0 50.0 58.1 57.8 0.0 15.5 0.309926 14505 16062 1632-1648 1.000000 80.8 trnL-UAA-trnT-UGU_p5 trnL-UAA-trnT-UGU 5 AGTCCGTAGCGTCTACCAAT GCGATGCTCTAACCTCTGAG 20 20 50.0 55.0 58.2 57.9 10.2 0.0 0.372548 14505 16062 1606-1622 1.000000 80.3 psbD-trnT-GGU_p1 psbD-trnT-GGU 1 CGAATCGATCCCTCCGTAAC CAGTGTGGTAGAGTAACGCC 20 20 55.0 55.0 58.0 58.0 0.0 0.0 0.055509 29967 31487 1609-1668 1.000000 83.6 psbD-trnT-GGU_p2 psbD-trnT-GGU 2 AAAACGAATCGATCCCTCCG CAGTGTGGTAGAGTAACGCC 20 20 50.0 55.0 58.1 58.0 10.5 0.0 0.071898 29967 31487 1613-1672 1.000000 83.5 psbD-trnT-GGU_p3 psbD-trnT-GGU 3 CGAATCGATCCCTCCGTAAC ACTCCTATTGGCTGGTTCCT 20 20 55.0 50.0 58.0 58.0 0.0 0.0 0.075091 29967 31487 1665-1724 1.000000 83.3 psbD-trnT-GGU_p4 psbD-trnT-GGU 4 AAAACGAATCGATCCCTCCG ACTCCTATTGGCTGGTTCCT 20 20 50.0 50.0 58.1 58.0 10.5 0.0 0.091480 29967 31487 1669-1728 1.000000 83.2 psbD-trnT-GGU_p5 psbD-trnT-GGU 5 CGAATCGATCCCTCCGTAAC GTGGTAGAGTAACGCCATGG 20 20 55.0 55.0 58.0 58.1 0.0 7.6 0.111746 29967 31487 1605-1664 1.000000 83.2 trnY-GUA-trnD-GUC_p1 trnY-GUA-trnD-GUC 1 TGGCAATATGTCTACGCTGG CGGTGCTCTGACCAATTGAA 20 20 50.0 50.0 57.8 58.5 0.0 7.1 0.716274 32186 32623 508-546 1.000000 75.9 trnY-GUA-trnD-GUC_p2 trnY-GUA-trnD-GUC 2 GGCAATATGTCTACGCTGGT CGGTGCTCTGACCAATTGAA 20 20 50.0 50.0 57.8 58.5 0.0 7.1 0.717825 32186 32623 507-545 1.000000 75.9 trnY-GUA-trnD-GUC_p3 trnY-GUA-trnD-GUC 3 GGGGACGGACTGTAAATTCG CGGTGCTCTGACCAATTGAA 20 20 55.0 50.0 58.4 58.5 0.0 7.1 0.828828 32186 32623 529-567 1.000000 75.0 trnY-GUA-trnD-GUC_p4 trnY-GUA-trnD-GUC 4 GGGACGGACTGTAAATTCGT CGGTGCTCTGACCAATTGAA 20 20 50.0 50.0 57.6 58.5 0.0 7.1 0.852505 32186 32623 528-566 1.000000 74.8 trnY-GUA-trnD-GUC_p5 trnY-GUA-trnD-GUC 5 GATTCTTCCTGGGTCGATGC CGGTGCTCTGACCAATTGAA 20 20 55.0 50.0 58.4 58.5 0.0 7.1 0.889785 32186 32623 562-600 1.000000 74.4 atpH-atpF_p1 atpH-atpF 1 CCGGAAGCAGAGGGAAAAAT GATGGCCAGTAACTCAAGCA 20 20 50.0 50.0 58.2 57.9 0.0 13.0 0.274437 49994 50659 833-834 1.000000 78.4 atpH-atpF_p2 atpH-atpF 2 CCGGAAGCAGAGGGAAAAAT CGGATGGCCAGTAACTCAAG 20 20 50.0 55.0 58.2 58.3 0.0 13.0 0.503924 49994 50659 835-836 1.000000 76.5 atpH-atpF_p3 atpH-atpF 3 CCGGAAGCAGAGGGAAAAAT TGGCCAGTAACTCAAGCAAA 20 20 50.0 45.0 58.2 57.6 0.0 0.0 0.517241 49994 50659 831-832 1.000000 76.4 atpH-atpF_p4 atpH-atpF 4 TGGGCTGGTTGTAGCATTAG GATGGCCAGTAACTCAAGCA 20 20 50.0 50.0 57.6 57.9 0.0 13.0 0.532228 49994 50659 762-763 1.000000 76.4 atpH-atpF_p5 atpH-atpF 5 AGCAGAGGGAAAAATACGGG GATGGCCAGTAACTCAAGCA 20 20 50.0 50.0 57.6 57.9 0.0 13.0 0.533919 49994 50659 828-829 1.000000 76.3 trnR-UCU-trnG-UCC_p1 trnR-UCU-trnG-UCC 1 AGAAGACCTCTGTCCTATCCA AGCCTTCCAAGCTAACGATG 21 20 47.6 50.0 56.9 58.0 0.0 0.0 2.081443 53776 54086 391-398 1.000000 65.4 trnR-UCU-trnG-UCC_p2 trnR-UCU-trnG-UCC 2 AGAAGACCTCTGTCCTATCCA CCTAGCCTTCCAAGCTAACG 21 20 47.6 55.0 56.9 58.1 0.0 0.0 2.110280 53776 54086 394-401 1.000000 65.1 trnR-UCU-trnG-UCC_p3 trnR-UCU-trnG-UCC 3 AGGTTTAGAAGACCTCTGTCCT AGCCTTCCAAGCTAACGATG 22 20 45.5 50.0 57.9 58.0 0.0 0.0 2.164771 53776 54086 397-404 1.000000 64.7 trnR-UCU-trnG-UCC_p4 trnR-UCU-trnG-UCC 4 AGGTTTAGAAGACCTCTGTCCT CCTAGCCTTCCAAGCTAACG 22 20 45.5 55.0 57.9 58.1 0.0 0.0 2.193608 53776 54086 400-407 1.000000 64.4 trnR-UCU-trnG-UCC_p5 trnR-UCU-trnG-UCC 5 AGAAGACCTCTGTCCTATCCA CCCTAGCCTTCCAAGCTAAC 21 20 47.6 55.0 56.9 57.7 0.0 0.0 2.385293 53776 54086 395-402 1.000000 62.9 trnG-UCC-trnS-GCU_p1 trnG-UCC-trnS-GCU 1 TGAATCAAGCAAGGGATCCC CAATCCGACGCTTTAGTCCA 20 20 50.0 50.0 57.6 58.0 24.6 0.0 0.446819 54860 55675 928-937 1.000000 79.9 trnG-UCC-trnS-GCU_p2 trnG-UCC-trnS-GCU 2 TGAATCAAGCAAGGGATCCC AATCCGACGCTTTAGTCCAC 20 20 50.0 50.0 57.6 58.0 24.6 0.0 0.448207 54860 55675 927-936 1.000000 79.9 trnG-UCC-trnS-GCU_p3 trnG-UCC-trnS-GCU 3 TGAATCAAGCAAGGGATCCC ACGGAAAGAGAGGGATTCGA 20 20 50.0 50.0 57.6 58.2 24.6 0.0 0.593585 54860 55675 981-990 1.000000 78.6 trnG-UCC-trnS-GCU_p4 trnG-UCC-trnS-GCU 4 TGAATCAAGCAAGGGATCCC AGCAATCCGACGCTTTAGTC 20 20 50.0 50.0 57.6 58.4 24.6 0.0 0.800659 54860 55675 930-939 1.000000 77.1 trnG-UCC-trnS-GCU_p5 trnG-UCC-trnS-GCU 5 TGAATCAAGCAAGGGATCCC CGACGCTTTAGTCCACTCAG 20 20 50.0 55.0 57.6 58.4 24.6 0.0 0.823376 54860 55675 923-932 1.000000 76.9 trnQ-UUG-accD_p1 trnQ-UUG-accD 1 GAGGTTCGAATCCTTCCGTC CCGCCCTTACCACAAATGTA 20 20 55.0 50.0 58.1 57.9 16.9 0.0 0.192928 57417 59732 2865-2910 1.000000 81.9 trnQ-UUG-accD_p2 trnQ-UUG-accD 2 GAGGTTCGAATCCTTCCGTC ATTTCCGCCCTTACCACAAA 20 20 55.0 45.0 58.1 57.7 16.9 0.0 0.372174 57417 59732 2869-2914 1.000000 80.5 trnQ-UUG-accD_p3 trnQ-UUG-accD 3 GAGGTTCGAATCCTTCCGTC TTTCCGCCCTTACCACAAAT 20 20 55.0 45.0 58.1 57.7 16.9 0.0 0.372174 57417 59732 2868-2913 1.000000 80.5 trnQ-UUG-accD_p4 trnQ-UUG-accD 4 GAGGTTCGAATCCTTCCGTC ATTCCGGATGTTCCTGACAC 20 20 55.0 50.0 58.1 57.6 16.9 4.1 0.479353 57417 59732 2521-2566 1.000000 80.0 trnQ-UUG-accD_p5 trnQ-UUG-accD 5 GAGGTTCGAATCCTTCCGTC TTCCGCCCTTACCACAAATG 20 20 55.0 50.0 58.1 58.5 16.9 0.0 0.535834 57417 59732 2867-2912 1.000000 79.2 accD-psaI_p1 accD-psaI 1 CCATGCTTTCTTTCCTTTGCC CCATTGCAATTGCCGGAAAT 21 20 47.6 45.0 58.3 58.0 0.0 26.9 1.335076 61236 61765 643-647 1.000000 70.9 accD-psaI_p2 accD-psaI 2 TGCTTTCTTTCCTTTGCCTCA CCATTGCAATTGCCGGAAAT 21 20 42.9 45.0 58.3 58.0 0.0 26.9 1.361838 61236 61765 640-644 1.000000 70.7 accD-psaI_p3 accD-psaI 3 CCATGCTTTCTTTCCTTTGCC AAGAAGCCATTGCAATTGCC 21 20 47.6 45.0 58.3 57.9 0.0 26.8 1.411610 61236 61765 649-653 1.000000 70.3 accD-psaI_p4 accD-psaI 4 TGCTTTCTTTCCTTTGCCTCA AAGAAGCCATTGCAATTGCC 21 20 42.9 45.0 58.3 57.9 0.0 26.8 1.438372 61236 61765 646-650 1.000000 70.1 accD-psaI_p5 accD-psaI 5 GCTTTCTTTCCTTTGCCTCA CCATTGCAATTGCCGGAAAT 20 20 45.0 45.0 56.5 58.0 0.0 26.9 1.501481 61236 61765 639-643 1.000000 69.6 trnP-UGG-psaJ_p1 trnP-UGG-psaJ 1 ACCCGTGACATTTTGTACCC CGCTAAAACCCCGAACCATA 20 20 50.0 50.0 58.1 58.0 0.0 0.0 0.126758 68923 69375 577-583 1.000000 81.7 trnP-UGG-psaJ_p2 trnP-UGG-psaJ 2 CCCGTGACATTTTGTACCCA CGCTAAAACCCCGAACCATA 20 20 50.0 50.0 58.1 58.0 0.0 0.0 0.128102 68923 69375 576-582 1.000000 81.7 trnP-UGG-psaJ_p3 trnP-UGG-psaJ 3 ACAGGATTTGAACCCGTGAC CGCTAAAACCCCGAACCATA 20 20 50.0 50.0 58.1 58.0 0.0 0.0 0.134794 68923 69375 588-594 1.000000 81.6 trnP-UGG-psaJ_p4 trnP-UGG-psaJ 4 CAGGATTTGAACCCGTGACA CGCTAAAACCCCGAACCATA 20 20 50.0 50.0 58.1 58.0 0.0 0.0 0.136127 68923 69375 587-593 1.000000 81.6 trnP-UGG-psaJ_p5 trnP-UGG-psaJ 5 TGACAGGATTTGAACCCGTG CGCTAAAACCCCGAACCATA 20 20 50.0 50.0 58.1 58.0 0.0 0.0 0.136127 68923 69375 590-596 1.000000 81.6 rps18_p1 rps18 1 TTGTGTGTCACCCTTCCAAG GAGATTTTCGCGGTTTGTGG 20 20 50.0 50.0 57.9 58.0 0.0 6.1 0.087588 70483 70797 1046-1064 1.000000 81.7 rps18_p2 rps18 2 CTTGTGTGTCACCCTTCCAA GAGATTTTCGCGGTTTGTGG 20 20 50.0 50.0 57.9 58.0 0.0 6.1 0.087588 70483 70797 1047-1065 1.000000 81.6 rps18_p3 rps18 3 GGTTCATGGCCAAGGGTAAA GAGATTTTCGCGGTTTGTGG 20 20 50.0 50.0 58.1 58.0 11.0 6.1 0.104618 70483 70797 1266-1284 1.000000 81.2 rps18_p4 rps18 4 AAAGGAGGTTCATGGCCAAG GAGATTTTCGCGGTTTGTGG 20 20 50.0 50.0 58.1 58.0 11.0 6.1 0.107385 70483 70797 1272-1290 1.000000 81.2 rps18_p5 rps18 5 TGGAAATGGAATGCTAGGGC GAGATTTTCGCGGTTTGTGG 20 20 50.0 50.0 57.9 58.0 0.0 6.1 0.108031 70483 70797 1512-1530 1.000000 80.9 clpP-psbB_p1 clpP-psbB 1 GAACTCGAAACGGCACTTTG ACCAAAACAAGCTACCCCTG 20 20 50.0 50.0 58.0 58.0 0.0 0.0 0.023341 73628 74716 1443-1582 1.000000 85.8 clpP-psbB_p2 clpP-psbB 2 GAACTCGAAGTGCCATGCTA ACCAAAACAAGCTACCCCTG 20 20 50.0 50.0 58.0 58.0 0.0 0.0 0.014769 73628 74716 1879-1999 1.000000 85.7 clpP-psbB_p3 clpP-psbB 3 CACTGTTGACTTCTTGGCCT ACCAAAACAAGCTACCCCTG 20 20 50.0 50.0 58.0 58.0 3.3 0.0 0.031752 73628 74716 1530-1669 1.000000 85.6 clpP-psbB_p4 clpP-psbB 4 GAACTCGAAGTGCCATGCTA ATCAAAACCTTCCACACCCC 20 20 50.0 50.0 58.0 58.0 0.0 0.0 0.019826 73628 74716 2116-2116 0.500000 59.8 clpP-psbB_p5 clpP-psbB 5 GAACTCGAAACGGCACTTTG ATCAAAACCTTCCACACCCC 20 20 50.0 50.0 58.0 58.0 0.0 0.0 0.028399 73628 74716 1699-1699 0.500000 59.8 rps8-rpl14_p1 rps8-rpl14 1 TCAGCATTGCGTATCAAGGT TGTTTCATTAGCACCCGAGG 20 20 45.0 50.0 57.6 57.9 2.4 0.0 0.509533 83209 83931 801-835 1.000000 79.2 rps8-rpl14_p2 rps8-rpl14 2 TCAGCATTGCGTATCAAGGT GTTTCATTAGCACCCGAGGT 20 20 45.0 50.0 57.6 57.9 2.4 0.0 0.511008 83209 83931 800-834 1.000000 79.2 rps8-rpl14_p3 rps8-rpl14 3 GTCAGCATTGCGTATCAAGG TGTTTCATTAGCACCCGAGG 20 20 50.0 50.0 57.3 57.9 2.4 0.0 0.852737 83209 83931 802-836 1.000000 76.5 rps8-rpl14_p4 rps8-rpl14 4 GTCAGCATTGCGTATCAAGG GTTTCATTAGCACCCGAGGT 20 20 50.0 50.0 57.3 57.9 2.4 0.0 0.854212 83209 83931 801-835 1.000000 76.5 rps8-rpl14_p5 rps8-rpl14 5 TCAGCATTGCGTATCAAGGT CCGGGAATTGAGACAGTTGA 20 20 45.0 50.0 57.6 57.5 2.4 0.0 0.874279 83209 83931 834-868 1.000000 76.2 ndhA_p1 ndhA 1 CACCGGGTTTTATCAATTTGCA ACCCAGTTACCATAAGGAACA 22 21 40.9 42.9 58.1 56.3 6.3 0.0 4.829145 119145 121448 2521-2525 1.000000 42.2 ndhA_p2 ndhA 2 GTCCACCGGGTTTTATCAAT ACCCAGTTACCATAAGGAACA 20 21 45.0 42.9 55.7 56.3 6.3 0.0 5.040669 119145 121448 2524-2528 1.000000 40.8 ndhA_p3 ndhA 3 ACCGGGTTTTATCAATTTGCA ACCCAGTTACCATAAGGAACA 21 21 38.1 42.9 56.7 56.3 6.3 0.0 5.065345 119145 121448 2520-2524 1.000000 40.8 ndhA_p4 ndhA 4 CACCGGGTTTTATCAATTTGCA AACCCAGTTACCATAAGGAACA 22 22 40.9 40.9 58.1 57.0 6.3 0.0 5.086037 119145 121448 2522-2526 1.000000 40.8 ndhA_p5 ndhA 5 CACCGGGTTTTATCAATTTGCA TGAACCCAGTTACCATAAGGA 22 21 40.9 42.9 58.1 56.0 6.3 0.0 5.113193 119145 121448 2524-2528 1.000000 40.8 psaC-ndhD_p1 psaC-ndhD 1 CAGAGGACTGTGTTGGTTGT ATTAAGGAACCCCCGGCTAT 20 20 50.0 50.0 57.7 58.2 0.0 0.0 0.502925 124123 124242 298-298 1.000000 77.3 psaC-ndhD_p2 psaC-ndhD 2 CAGAGGACTGTGTTGGTTGT CCCGGCTATTGGCAAAACTA 20 20 50.0 50.0 57.7 58.2 0.0 3.0 0.574381 124123 124242 287-287 1.000000 76.8 psaC-ndhD_p3 psaC-ndhD 3 CAGAGGACTGTGTTGGTTGT AATTAAGGAACCCCCGGCTA 20 20 50.0 50.0 57.7 58.4 0.0 0.0 0.733194 124123 124242 299-299 1.000000 75.5 psaC-ndhD_p4 psaC-ndhD 4 CAGAGGACTGTGTTGGTTGT TTAAGGAACCCCCGGCTATT 20 20 50.0 50.0 57.7 58.4 0.0 0.0 0.733194 124123 124242 297-297 1.000000 75.5 psaC-ndhD_p5 psaC-ndhD 5 CAGAGGACTGTGTTGGTTGT AAAATTAAGGAACCCCCGGC 20 20 50.0 50.0 57.7 58.4 0.0 0.0 0.768139 124123 124242 301-301 1.000000 75.2 trnL-UAG-rpl32_p1 trnL-UAG-rpl32 1 AAGTAGCAAAGCCTTGGGTC TGGACAGCATTGAAAGCCTT 20 20 50.0 45.0 58.1 58.0 0.0 0.0 0.089294 127174 127843 1302-1302 0.500000 59.3 trnL-UAG-rpl32_p2 trnL-UAG-rpl32 2 AAGTAGCAAAGCCTTGGGTC TTGGACAGCATTGAAAGCCT 20 20 50.0 45.0 58.1 58.0 0.0 0.0 0.089294 127174 127843 1303-1303 0.500000 59.3 trnL-UAG-rpl32_p3 trnL-UAG-rpl32 3 GAAGTAGCAAAGCCTTGGGT TGGACAGCATTGAAAGCCTT 20 20 50.0 45.0 58.1 58.0 0.0 0.0 0.089294 127174 127843 1303-1303 0.500000 59.3 trnL-UAG-rpl32_p4 trnL-UAG-rpl32 4 GAAGTAGCAAAGCCTTGGGT TTGGACAGCATTGAAAGCCT 20 20 50.0 45.0 58.1 58.0 0.0 0.0 0.089294 127174 127843 1304-1304 0.500000 59.3 trnL-UAG-rpl32_p5 trnL-UAG-rpl32 5 ATGGGATTGTAGAGCGGGTA TGGACAGCATTGAAAGCCTT 20 20 50.0 45.0 57.9 58.0 0.0 0.0 0.097462 127174 127843 1361-1361 0.500000 59.2