feature_id feature_type parent_gene label_name start end strand length_bp region pi variable_sites indel_sites conserved_left_bp conserved_right_bp primer_available species_resolution unique_haplotype_count species_specific_haplotype_ratio interspecific_divergence alignment_reliability markerseek_score ndhB_part1 gene ndhB ndhB 1 1779 -1 1779 LSC 0.016863 30 0 217 143 no 1.000000 2 1.000000 NA 1.000000 63.600000 IGS_001 igs ndhB|matK ndhB-matK 1780 1972 0 193 LSC 0.005181 1 0 15 51 no 1.000000 2 1.000000 NA 1.000000 41.600000 matK gene matK matK 1973 3472 -1 1500 LSC 0.012667 19 0 49 87 no 1.000000 2 1.000000 NA 1.000000 54.700000 IGS_002 igs matK|rps16 matK-rps16 3473 4173 0 701 LSC 0.017167 12 0 13 178 no 1.000000 2 1.000000 NA 0.997147 54.500000 rps16 gene rps16 rps16 4174 5164 -1 991 LSC 0.011100 11 0 5 2 no 1.000000 2 1.000000 NA 1.000000 50.300000 IGS_003 igs rps16|chlB rps16-chlB 5165 5344 0 180 LSC 0.016667 3 0 300 135 no 1.000000 2 1.000000 NA 1.000000 57.200000 chlB gene chlB chlB 5345 6889 -1 1545 LSC 0.007120 11 0 69 118 no 1.000000 2 1.000000 NA 1.000000 52.900000 IGS_004 igs chlB|trnQ-UUG chlB-trnQ-UUG 6890 7048 0 159 LSC 0.018868 3 0 26 124 no 1.000000 2 1.000000 NA 1.000000 50.300000 trnQ-UUG tRNA trnQ-UUG trnQ-UUG 7049 7120 -1 72 LSC 0.000000 0 0 11 52 no 0.000000 1 0.000000 NA 1.000000 19.600000 IGS_005 igs trnQ-UUG|psbK trnQ-UUG-psbK 7121 7440 0 320 LSC 0.006250 2 0 83 59 no 1.000000 2 1.000000 NA 1.000000 45.900000 psbK gene psbK psbK 7441 7617 1 177 LSC 0.011299 2 0 52 55 no 1.000000 2 1.000000 NA 1.000000 47.900000 IGS_006 igs psbK|psbI psbK-psbI 7618 7804 0 187 LSC 0.021505 4 1 48 113 no 1.000000 2 1.000000 NA 0.994652 54.000000 psbI gene psbI psbI 7805 7915 1 111 LSC 0.000000 0 0 0 2 no 0.000000 1 0.000000 NA 1.000000 18.800000 IGS_007 igs psbI|trnS-GCU psbI-trnS-GCU 7916 7993 0 78 LSC 0.025641 2 0 111 147 no 1.000000 2 1.000000 NA 1.000000 60.600000 trnS-GCU tRNA trnS-GCU trnS-GCU 7994 8081 -1 88 LSC 0.000000 0 0 57 59 no 0.000000 1 0.000000 NA 1.000000 23.000000 IGS_008 igs trnS-GCU|ycf12 trnS-GCU-ycf12 8082 8709 0 628 LSC 0.020701 13 0 145 32 no 1.000000 2 1.000000 NA 1.000000 58.100000 ycf12 gene ycf12 ycf12 8710 8811 1 102 LSC 0.009804 1 0 38 38 no 1.000000 2 1.000000 NA 1.000000 46.000000 IGS_009 igs ycf12|trnG-UCC ycf12-trnG-UCC 8812 9021 0 210 LSC 0.028571 6 0 69 127 no 1.000000 2 1.000000 NA 1.000000 59.100000 trnG-UCC_part1 tRNA trnG-UCC trnG-UCC 9022 9044 1 23 LSC 0.000000 0 0 11 104 no 0.000000 1 0.000000 NA 1.000000 19.600000 trnG-UCC_part2 tRNA trnG-UCC trnG-UCC 9999 10046 1 48 LSC 0.000000 0 0 117 88 no 0.000000 1 0.000000 NA 1.000000 25.400000 IGS_012 igs trnG-UCC|trnR-UCU trnG-UCC-trnR-UCU 10047 10229 0 183 LSC 0.049180 9 0 165 67 no 1.000000 2 1.000000 NA 1.000000 70.800000 trnR-UCU tRNA trnR-UCU trnR-UCU 10230 10301 1 72 LSC 0.013889 1 0 8 16 no 1.000000 2 1.000000 NA 1.000000 46.100000 IGS_013 igs trnR-UCU|atpA trnR-UCU-atpA 10302 10389 0 88 LSC 0.035714 3 4 4 273 no 1.000000 2 1.000000 NA 0.954545 62.500000 atpA gene atpA atpA 10390 11913 -1 1524 LSC 0.005906 9 0 67 136 no 1.000000 2 1.000000 NA 1.000000 52.100000 IGS_014 igs atpA|atpF atpA-atpF 11914 11996 0 83 LSC 0.000000 0 0 169 53 no 0.000000 1 0.000000 NA 1.000000 22.700000 atpF gene atpF atpF 11997 13207 -1 1211 LSC 0.004129 5 0 252 180 no 1.000000 2 1.000000 NA 1.000000 59.600000 IGS_015 igs atpF|atpH atpF-atpH 13208 13390 0 183 LSC 0.005464 1 0 202 170 no 1.000000 2 1.000000 NA 1.000000 53.400000 atpH gene atpH atpH 13391 13636 -1 246 LSC 0.004065 1 0 2 1 no 1.000000 2 1.000000 NA 1.000000 39.900000 IGS_016 igs atpH|atpI atpH-atpI 13637 14392 0 756 LSC 0.015873 12 0 75 300 no 1.000000 2 1.000000 NA 1.000000 58.500000 atpI gene atpI atpI 14393 15139 -1 747 LSC 0.001339 1 0 7 16 no 1.000000 2 1.000000 NA 1.000000 45.000000 IGS_017 igs atpI|rps2 atpI-rps2 15140 15314 0 175 LSC 0.017241 3 1 300 28 no 1.000000 2 1.000000 NA 0.994286 50.100000 rps2 gene rps2 rps2 15315 16031 -1 717 LSC 0.004190 3 0 81 193 no 1.000000 2 1.000000 NA 0.998605 52.200000 IGS_018 igs rps2|rpoC2 rps2-rpoC2 16032 16164 0 133 LSC 0.000000 0 0 239 60 no 0.000000 1 0.000000 NA 1.000000 23.200000 rpoC2 gene rpoC2 rpoC2 16165 20448 -1 4284 LSC 0.007937 34 0 300 130 no 1.000000 2 1.000000 NA 1.000000 52.900000 IGS_019 igs rpoC2|rpoC1 rpoC2-rpoC1 20449 20687 0 239 LSC 0.020921 5 0 47 271 no 1.000000 2 1.000000 NA 1.000000 53.100000 rpoC1 gene rpoC1 rpoC1 20688 23405 -1 2718 LSC 0.006255 17 0 11 75 no 1.000000 2 1.000000 NA 1.000000 45.600000 IGS_020 igs rpoC1|rpoB rpoC1-rpoB 23406 23453 0 48 LSC 0.000000 0 0 63 27 no 0.000000 1 0.000000 NA 1.000000 20.800000 rpoB gene rpoB rpoB 23454 26675 -1 3222 LSC 0.005276 17 0 111 54 no 1.000000 2 1.000000 NA 1.000000 47.400000 IGS_021 igs rpoB|trnD-GUC rpoB-trnD-GUC 26676 29742 0 3067 LSC 0.384113 1117 159 17 93 yes 1.000000 2 1.000000 NA 0.948158 81.600000 trnD-GUC tRNA trnD-GUC trnD-GUC 29743 29816 1 74 LSC 0.000000 0 0 19 19 no 0.000000 1 0.000000 NA 1.000000 20.200000 IGS_022 igs trnD-GUC|trnY-GUA trnD-GUC-trnY-GUA 29817 29911 0 95 LSC 0.083333 6 23 93 95 no 1.000000 2 1.000000 NA 0.757895 74.300000 trnY-GUA tRNA trnY-GUA trnY-GUA 29912 29993 -1 82 LSC 0.000000 0 0 7 13 no 0.000000 1 0.000000 NA 1.000000 19.300000 IGS_023 igs trnY-GUA|trnE-UUC trnY-GUA-trnE-UUC 29994 30172 0 179 LSC 0.033520 6 0 89 153 no 1.000000 2 1.000000 NA 1.000000 63.400000 trnE-UUC tRNA trnE-UUC trnE-UUC 30173 30245 -1 73 LSC 0.000000 0 0 32 80 no 0.000000 1 0.000000 NA 1.000000 21.100000 IGS_024 igs trnE-UUC|psbM trnE-UUC-psbM 30246 30663 0 418 LSC 0.016746 7 0 105 247 no 1.000000 2 1.000000 NA 1.000000 57.500000 psbM gene psbM psbM 30664 30771 1 108 LSC 0.000000 0 0 67 139 no 0.000000 1 0.000000 NA 1.000000 23.800000 IGS_025 igs psbM|petN psbM-petN 30772 31553 0 782 LSC 0.026923 21 2 175 121 no 1.000000 2 1.000000 NA 0.997442 68.500000 petN gene petN petN 31554 31643 -1 90 LSC 0.000000 0 0 17 31 no 0.000000 1 0.000000 NA 1.000000 20.000000 IGS_026 igs petN|trnC-GCA petN-trnC-GCA 31644 32076 0 433 LSC 0.030023 13 0 107 121 no 1.000000 2 1.000000 NA 1.000000 65.600000 trnC-GCA tRNA trnC-GCA trnC-GCA 32077 32148 -1 72 LSC 0.000000 0 0 26 49 no 0.000000 1 0.000000 NA 1.000000 20.700000 IGS_027 igs trnC-GCA|trnG-GCC trnC-GCA-trnG-GCC 32149 32454 0 306 LSC 0.029508 9 0 98 123 no 1.000000 2 1.000000 NA 0.996732 61.800000 trnG-GCC tRNA trnG-GCC trnG-GCC 32455 32525 -1 71 LSC 0.000000 0 0 2 52 no 0.000000 1 0.000000 NA 1.000000 18.900000 IGS_028 igs trnG-GCC|psbZ trnG-GCC-psbZ 32526 32770 0 245 LSC 0.020408 5 0 73 51 no 1.000000 2 1.000000 NA 1.000000 53.100000 psbZ gene psbZ psbZ 32771 32959 -1 189 LSC 0.026455 5 0 71 99 no 1.000000 2 1.000000 NA 1.000000 58.000000 IGS_029 igs psbZ|trnS-UGA psbZ-trnS-UGA 32960 33360 0 401 LSC 0.012469 5 0 68 133 no 1.000000 2 1.000000 NA 1.000000 51.900000 trnS-UGA tRNA trnS-UGA trnS-UGA 33361 33449 1 89 LSC 0.000000 0 0 122 44 no 0.000000 1 0.000000 NA 1.000000 22.100000 IGS_030 igs trnS-UGA|psbC trnS-UGA-psbC 33450 33754 0 305 LSC 0.013333 4 5 211 19 no 1.000000 2 1.000000 NA 0.983607 48.300000 psbC gene psbC psbC 33755 35176 -1 1422 LSC 0.006329 9 0 42 97 no 1.000000 2 1.000000 NA 1.000000 50.500000 psbD gene psbD psbD 35124 36185 -1 1062 LSC 0.004708 5 0 66 222 no 1.000000 2 1.000000 NA 1.000000 51.400000 IGS_032 igs psbD|trnT-GGU psbD-trnT-GGU 36186 37339 0 1154 LSC 0.013010 15 0 221 115 no 1.000000 2 1.000000 NA 0.999133 59.800000 trnT-GGU tRNA trnT-GGU trnT-GGU 37340 37411 -1 72 LSC 0.000000 0 0 12 43 no 0.000000 1 0.000000 NA 1.000000 19.700000 IGS_033 igs trnT-GGU|trnfM-CAU trnT-GGU-trnfM-CAU 37412 37536 0 125 LSC 0.032000 4 0 84 129 no 1.000000 2 1.000000 NA 1.000000 62.200000 trnfM-CAU tRNA trnfM-CAU trnfM-CAU 37537 37610 -1 74 LSC 0.000000 0 0 11 55 no 0.000000 1 0.000000 NA 1.000000 19.600000 IGS_034 igs trnfM-CAU|rps14 trnfM-CAU-rps14 37611 37789 0 179 LSC 0.067039 12 0 85 117 no 1.000000 2 1.000000 NA 1.000000 74.800000 rps14 gene rps14 rps14 37790 38092 -1 303 LSC 0.003300 1 0 23 21 no 1.000000 2 1.000000 NA 1.000000 41.000000 IGS_035 igs rps14|psaB rps14-psaB 38093 38261 0 169 LSC 0.029586 5 0 185 15 no 1.000000 2 1.000000 NA 1.000000 55.600000 psaB gene psaB psaB 38262 40466 -1 2205 LSC 0.007256 16 0 29 211 no 1.000000 2 1.000000 NA 1.000000 48.600000 IGS_036 igs psaB|psaA psaB-psaA 40467 40494 0 28 LSC 0.000000 0 0 300 183 no 0.000000 1 0.000000 NA 1.000000 32.500000 psaA gene psaA psaA 40495 42747 -1 2253 LSC 0.006658 15 0 300 66 no 1.000000 2 1.000000 NA 1.000000 51.000000 IGS_037 igs psaA|ycf3 psaA-ycf3 42748 43038 0 291 LSC 0.013746 4 0 300 5 no 1.000000 2 1.000000 NA 1.000000 45.800000 ycf3 gene ycf3 ycf3 43039 44953 -1 1915 LSC 0.008882 17 1 60 67 no 1.000000 2 1.000000 NA 0.999478 52.500000 IGS_038 igs ycf3|trnS-GGA ycf3-trnS-GGA 44954 45268 0 315 LSC 0.012698 4 0 89 113 no 1.000000 2 1.000000 NA 1.000000 51.800000 trnS-GGA tRNA trnS-GGA trnS-GGA 45269 45355 1 87 LSC 0.000000 0 0 16 26 no 0.000000 1 0.000000 NA 1.000000 20.000000 IGS_039 igs trnS-GGA|rps4 trnS-GGA-rps4 45356 45776 0 421 LSC 0.016627 7 0 103 70 no 1.000000 2 1.000000 NA 1.000000 54.800000 rps4 gene rps4 rps4 45777 46364 -1 588 LSC 0.015306 9 0 79 96 no 1.000000 2 1.000000 NA 1.000000 58.200000 IGS_040 igs rps4|trnL-UAA rps4-trnL-UAA 46365 47123 0 759 LSC 0.021108 16 0 41 146 no 1.000000 2 1.000000 NA 0.998682 58.900000 trnL-UAA_part1 tRNA trnL-UAA trnL-UAA 47124 47157 1 34 LSC 0.000000 0 0 36 112 no 0.000000 1 0.000000 NA 1.000000 21.400000 trnL-UAA_part2 tRNA trnL-UAA trnL-UAA 47780 47826 1 47 LSC 0.000000 0 0 86 53 no 0.000000 1 0.000000 NA 1.000000 22.700000 IGS_043 igs trnL-UAA|trnF-GAA trnL-UAA-trnF-GAA 47827 48129 0 303 LSC 0.013201 4 0 133 89 no 1.000000 2 1.000000 NA 1.000000 51.800000 trnF-GAA tRNA trnF-GAA trnF-GAA 48130 48202 1 73 LSC 0.000000 0 0 25 16 no 0.000000 1 0.000000 NA 1.000000 20.000000 IGS_044 igs trnF-GAA|ndhJ trnF-GAA-ndhJ 48203 48436 0 234 LSC 0.017316 4 3 98 51 no 1.000000 2 1.000000 NA 0.987179 52.500000 ndhJ gene ndhJ ndhJ 48437 48949 -1 513 LSC 0.005848 3 0 107 14 no 1.000000 2 1.000000 NA 1.000000 46.400000 IGS_045 igs ndhJ|ndhK ndhJ-ndhK 48950 49005 0 56 LSC 0.035714 2 0 163 26 no 1.000000 2 1.000000 NA 1.000000 60.000000 ndhK gene ndhK ndhK 49006 49755 -1 750 LSC 0.006667 5 0 34 300 no 1.000000 2 1.000000 NA 1.000000 50.100000 ndhC gene ndhC ndhC 49746 50108 -1 363 LSC 0.000000 0 0 68 79 no 0.000000 1 0.000000 NA 1.000000 25.200000 IGS_047 igs ndhC|trnM-CAU ndhC-trnM-CAU 50109 51467 0 1359 LSC 0.019956 27 6 300 77 no 1.000000 2 1.000000 NA 0.995585 61.400000 trnM-CAU tRNA trnM-CAU trnM-CAU 51468 51540 1 73 LSC 0.000000 0 0 124 4 no 0.000000 1 0.000000 NA 1.000000 19.100000 IGS_048 igs trnM-CAU|atpE trnM-CAU-atpE 51541 51711 0 171 LSC 0.023392 4 0 197 144 no 1.000000 2 1.000000 NA 1.000000 61.800000 atpE gene atpE atpE 51712 52110 -1 399 LSC 0.012531 5 0 9 10 no 1.000000 2 1.000000 NA 1.000000 47.400000 IGS_049 igs atpE|atpB atpE-atpB 52111 52114 0 4 LSC 0.000000 0 0 89 6 no 0.000000 1 0.000000 NA 1.000000 19.200000 atpB gene atpB atpB 52115 53596 -1 1482 LSC 0.004723 7 0 93 83 no 1.000000 2 1.000000 NA 1.000000 52.700000 IGS_050 igs atpB|rbcL atpB-rbcL 53597 54198 0 602 LSC 0.006645 4 0 135 93 no 1.000000 2 1.000000 NA 1.000000 54.500000 rbcL gene rbcL rbcL 54199 55626 1 1428 LSC 0.009104 13 0 194 22 no 1.000000 2 1.000000 NA 1.000000 50.600000 IGS_051 igs rbcL|accD rbcL-accD 55627 56162 0 536 LSC 0.011194 6 0 300 192 no 1.000000 2 1.000000 NA 1.000000 63.300000 accD gene accD accD 56163 57086 1 924 LSC 0.003247 3 0 68 0 no 1.000000 2 1.000000 NA 1.000000 45.600000 IGS_052 igs accD|psaI accD-psaI 57087 57372 0 286 LSC 0.015152 4 22 75 214 no 1.000000 2 1.000000 NA 0.923077 55.800000 psaI gene psaI psaI 57373 57483 1 111 LSC 0.000000 0 0 149 103 no 0.000000 1 0.000000 NA 1.000000 26.500000 IGS_053 igs psaI|ycf4 psaI-ycf4 57484 57887 0 404 LSC 0.034653 14 0 260 11 no 1.000000 2 1.000000 NA 1.000000 60.400000 ycf4 gene ycf4 ycf4 57888 58439 1 552 LSC 0.007246 4 0 2 14 no 1.000000 2 1.000000 NA 1.000000 47.100000 IGS_054 igs ycf4|cemA ycf4-cemA 58440 58630 0 191 LSC 0.026178 5 0 126 99 no 1.000000 2 1.000000 NA 1.000000 60.000000 cemA gene cemA cemA 58631 60166 1 1536 LSC 0.009766 15 0 54 4 no 1.000000 2 1.000000 NA 1.000000 49.600000 IGS_055 igs cemA|petA cemA-petA 60167 60361 0 195 LSC 0.035897 7 0 300 91 no 1.000000 2 1.000000 NA 1.000000 65.000000 petA gene petA petA 60362 61324 1 963 LSC 0.002077 2 0 36 26 no 1.000000 2 1.000000 NA 1.000000 46.900000 IGS_056 igs petA|psbJ petA-psbJ 61325 62243 0 919 LSC 0.022851 21 0 300 123 no 1.000000 2 1.000000 NA 1.000000 66.100000 psbJ gene psbJ psbJ 62244 62366 -1 123 LSC 0.000000 0 0 49 0 no 0.000000 1 0.000000 NA 1.000000 18.800000 IGS_057 igs psbJ|psbL psbJ-psbL 62367 62485 0 119 LSC 0.008403 1 0 172 300 no 1.000000 2 1.000000 NA 1.000000 55.200000 psbL gene psbL psbL 62486 62602 -1 117 LSC 0.000000 0 0 118 300 no 0.000000 1 0.000000 NA 1.000000 27.600000 IGS_058 igs psbL|psbF psbL-psbF 62603 62623 0 21 LSC 0.000000 0 0 235 291 no 0.000000 1 0.000000 NA 1.000000 33.800000 psbF gene psbF psbF 62624 62743 -1 120 LSC 0.000000 0 0 256 171 no 0.000000 1 0.000000 NA 1.000000 31.600000 IGS_059 igs psbF|psbE psbF-psbE 62744 62752 0 9 LSC 0.000000 0 0 300 162 no 0.000000 1 0.000000 NA 1.000000 30.900000 psbE gene psbE psbE 62753 63004 -1 252 LSC 0.003968 1 0 300 285 no 1.000000 2 1.000000 NA 1.000000 54.800000 IGS_060 igs psbE|petL psbE-petL 63005 63727 0 723 LSC 0.012448 9 0 89 110 no 1.000000 2 1.000000 NA 1.000000 57.600000 petL gene petL petL 63728 63823 1 96 LSC 0.000000 0 0 97 14 no 0.000000 1 0.000000 NA 1.000000 19.800000 IGS_061 igs petL|petG petL-petG 63824 63991 0 168 LSC 0.011905 2 0 193 132 no 1.000000 2 1.000000 NA 1.000000 54.200000 petG gene petG petG 63992 64105 1 114 LSC 0.000000 0 0 23 18 no 0.000000 1 0.000000 NA 1.000000 20.100000 IGS_062 igs petG|trnW-CCA petG-trnW-CCA 64106 64324 0 219 LSC 0.036530 8 0 137 88 no 1.000000 2 1.000000 NA 1.000000 65.100000 trnW-CCA tRNA trnW-CCA trnW-CCA 64325 64398 -1 74 LSC 0.000000 0 0 21 14 no 0.000000 1 0.000000 NA 1.000000 19.800000 IGS_063 igs trnW-CCA|trnP-UGG trnW-CCA-trnP-UGG 64399 64564 0 166 LSC 0.048193 8 0 95 88 no 1.000000 2 1.000000 NA 1.000000 71.800000 trnP-UGG tRNA trnP-UGG trnP-UGG 64565 64638 -1 74 LSC 0.000000 0 0 2 14 no 0.000000 1 0.000000 NA 1.000000 18.900000 IGS_064 igs trnP-UGG|psaJ trnP-UGG-psaJ 64639 64987 0 349 LSC 0.014327 5 0 76 101 no 1.000000 2 1.000000 NA 1.000000 52.500000 psaJ gene psaJ psaJ 64988 65116 1 129 LSC 0.015504 2 0 186 58 no 1.000000 2 1.000000 NA 1.000000 50.800000 IGS_065 igs psaJ|rpl33 psaJ-rpl33 65117 65359 0 243 LSC 0.008547 2 9 3 214 no 1.000000 2 1.000000 NA 0.962963 46.200000 rpl33 gene rpl33 rpl33 65360 65560 1 201 LSC 0.000000 0 0 32 13 no 0.000000 1 0.000000 NA 1.000000 19.700000 IGS_066 igs rpl33|rps18 rpl33-rps18 65561 65629 0 69 LSC 0.028986 2 0 233 86 no 1.000000 2 1.000000 NA 1.000000 60.600000 rps18 gene rps18 rps18 65630 65857 1 228 LSC 0.013158 3 0 46 52 no 1.000000 2 1.000000 NA 1.000000 48.500000 IGS_067 igs rps18|rpl20 rps18-rpl20 65858 66105 0 248 LSC 0.016129 4 0 6 36 no 1.000000 2 1.000000 NA 1.000000 47.200000 rpl20 gene rpl20 rpl20 66106 66462 -1 357 LSC 0.011204 4 0 75 88 no 1.000000 2 1.000000 NA 1.000000 50.800000 IGS_068 igs rpl20|rps12 rpl20-rps12 66463 67409 0 947 LSC 0.011616 11 0 130 132 no 1.000000 2 1.000000 NA 1.000000 60.200000 rps12_part1 gene rps12 rps12 67410 67526 -1 117 LSC 0.000000 0 0 84 15 no 0.000000 1 0.000000 NA 1.000000 19.900000 IGS_069 igs rps12|clpP rps12-clpP 67527 67786 0 260 LSC 0.007692 2 0 201 51 no 1.000000 2 1.000000 NA 1.000000 45.700000 clpP gene clpP clpP 67787 69786 -1 2000 LSC 0.011506 23 1 143 4 no 1.000000 2 1.000000 NA 0.999500 49.700000 IGS_070 igs clpP|psbB clpP-psbB 69787 70289 0 503 LSC 0.021869 11 0 106 206 no 1.000000 2 1.000000 NA 1.000000 62.300000 psbB gene psbB psbB 70290 71816 1 1527 LSC 0.005239 8 0 71 103 no 1.000000 2 1.000000 NA 1.000000 52.000000 IGS_071 igs psbB|psbT psbB-psbT 71817 72075 0 259 LSC 0.007722 2 0 45 122 no 1.000000 2 1.000000 NA 1.000000 45.300000 psbT gene psbT psbT 72076 72180 1 105 LSC 0.000000 0 0 113 17 no 0.000000 1 0.000000 NA 1.000000 20.000000 IGS_072 igs psbT|psbN psbT-psbN 72181 72255 0 75 LSC 0.013333 1 0 218 100 no 1.000000 2 1.000000 NA 1.000000 52.700000 psbN gene psbN psbN 72256 72393 -1 138 LSC 0.007246 1 0 57 300 no 1.000000 2 1.000000 NA 1.000000 45.900000 IGS_073 igs psbN|psbH psbN-psbH 72394 72480 0 87 LSC 0.000000 0 0 37 249 no 0.000000 1 0.000000 NA 1.000000 21.500000 psbH gene psbH psbH 72481 72705 1 225 LSC 0.000000 0 0 124 24 no 0.000000 1 0.000000 NA 1.000000 20.600000 IGS_074 igs psbH|petB psbH-petB 72706 72964 0 259 LSC 0.019531 5 3 300 184 no 1.000000 2 1.000000 NA 0.988417 63.600000 petB gene petB petB 72965 74303 1 1339 LSC 0.011219 15 2 56 63 no 1.000000 2 1.000000 NA 0.998506 54.500000 IGS_075 igs petB|petD petB-petD 74304 74470 0 167 LSC 0.011976 2 0 300 72 no 1.000000 2 1.000000 NA 1.000000 49.800000 petD gene petD petD 74471 75639 1 1169 LSC 0.008554 10 0 36 57 no 1.000000 2 1.000000 NA 1.000000 51.400000 IGS_076 igs petD|rpoA petD-rpoA 75640 75895 0 256 LSC 0.023438 6 0 39 39 no 1.000000 2 1.000000 NA 1.000000 53.900000 rpoA gene rpoA rpoA 75896 76924 -1 1029 LSC 0.008755 9 0 26 151 no 1.000000 2 1.000000 NA 0.999028 50.700000 IGS_077 igs rpoA|rps11 rpoA-rps11 76925 76970 0 46 LSC 0.000000 0 0 59 105 no 0.000000 1 0.000000 NA 1.000000 23.200000 rps11 gene rps11 rps11 76971 77366 -1 396 LSC 0.002525 1 0 105 17 no 1.000000 2 1.000000 NA 1.000000 42.200000 IGS_078 igs rps11|rpl36 rps11-rpl36 77367 77437 0 71 LSC 0.028169 2 0 290 15 no 1.000000 2 1.000000 NA 1.000000 54.800000 rpl36 gene rpl36 rpl36 77438 77551 -1 114 LSC 0.008772 1 0 52 11 no 1.000000 2 1.000000 NA 1.000000 43.400000 IGS_079 igs rpl36|infA rpl36-infA 77552 77668 0 117 LSC 0.025641 3 0 98 33 no 1.000000 2 1.000000 NA 1.000000 54.700000 infA gene infA infA 77669 77911 -1 243 LSC 0.004115 1 0 45 57 no 1.000000 2 1.000000 NA 1.000000 43.200000 IGS_080 igs infA|rps8 infA-rps8 77912 78006 0 95 LSC 0.010526 1 0 209 122 no 1.000000 2 1.000000 NA 1.000000 52.700000 rps8 gene rps8 rps8 78007 78405 -1 399 LSC 0.007519 3 0 37 65 no 1.000000 2 1.000000 NA 1.000000 46.700000 IGS_081 igs rps8|rpl14 rps8-rpl14 78406 78697 0 292 LSC 0.006849 2 0 58 102 no 1.000000 2 1.000000 NA 1.000000 45.800000 rpl14 gene rpl14 rpl14 78698 79066 -1 369 LSC 0.005420 2 0 58 50 no 1.000000 2 1.000000 NA 1.000000 45.800000 IGS_082 igs rpl14|rpl16 rpl14-rpl16 79067 79376 0 310 LSC 0.012903 4 0 11 132 no 1.000000 2 1.000000 NA 1.000000 46.000000 rpl16 gene rpl16 rpl16 79377 80282 -1 906 LSC 0.013319 12 5 99 25 no 1.000000 2 1.000000 NA 0.994481 53.800000 IGS_083 igs rpl16|rps3 rpl16-rps3 80283 80639 0 357 LSC 0.011204 4 0 10 30 no 1.000000 2 1.000000 NA 1.000000 45.900000 rps3 gene rps3 rps3 80640 81293 -1 654 LSC 0.006126 4 0 162 40 no 1.000000 2 1.000000 NA 0.998471 50.200000 IGS_084 igs rps3|rpl22 rps3-rpl22 81294 81396 0 103 LSC 0.029126 3 0 149 99 no 1.000000 2 1.000000 NA 1.000000 61.700000 rpl22 gene rpl22 rpl22 81397 81765 -1 369 LSC 0.008130 3 0 18 6 no 1.000000 2 1.000000 NA 1.000000 44.100000 IGS_085 igs rpl22|rps19 rpl22-rps19 81766 81777 0 12 LSC 0.083333 1 0 8 120 no 1.000000 2 1.000000 NA 1.000000 71.000000 rps19 gene rps19 rps19 81778 82056 -1 279 LSC 0.007168 2 0 5 205 no 1.000000 2 1.000000 NA 1.000000 42.000000 IGS_086 igs rps19|rpl2 rps19-rpl2 82057 82093 0 37 LSC 0.000000 0 0 57 168 no 0.000000 1 0.000000 NA 1.000000 23.000000 rpl2 gene rpl2 rpl2 82094 83643 -1 1550 LSC 0.020013 31 1 94 75 no 1.000000 2 1.000000 NA 0.999355 60.800000 IGS_087 igs rpl2|rpl23 rpl2-rpl23 83644 83744 0 101 LSC 0.019802 2 0 21 14 no 1.000000 2 1.000000 NA 1.000000 49.900000 rpl23 gene rpl23 rpl23 83745 84026 -1 282 LSC 0.007092 2 0 21 52 no 1.000000 2 1.000000 NA 1.000000 43.200000 IGS_088 igs rpl23|trnI-CAU rpl23-trnI-CAU 84027 84260 0 234 LSC 0.025641 6 0 11 58 no 1.000000 2 1.000000 NA 1.000000 53.100000 trnI-CAU tRNA trnI-CAU trnI-CAU 84261 84334 -1 74 LSC 0.013514 1 0 1 213 no 1.000000 2 1.000000 NA 1.000000 45.300000 IGS_089 igs trnI-CAU|trnR-ACG trnI-CAU-trnR-ACG 84335 84888 0 554 IRb 0.003636 2 4 15 161 no 1.000000 2 1.000000 NA 0.992780 46.700000 trnR-ACG tRNA trnR-ACG trnR-ACG 84889 84962 -1 74 IRb 0.000000 0 0 60 87 no 0.000000 1 0.000000 NA 1.000000 23.200000 IGS_090 igs trnR-ACG|rrn16 trnR-ACG-rrn16 84963 85899 0 937 IRb 0.036471 31 87 134 300 yes 1.000000 2 1.000000 NA 0.907150 78.000000 rrn16 rRNA rrn16 rrn16 85900 87399 1 1500 IRb 0.000000 0 0 127 300 no 0.000000 1 0.000000 NA 1.000000 34.500000 IGS_091 igs rrn16|trnI-GAU rrn16-trnI-GAU 87400 87682 0 283 IRb 0.000000 0 50 300 181 no 1.000000 2 1.000000 NA 0.823322 52.400000 trnI-GAU_part1 tRNA trnI-GAU trnI-GAU 87683 87718 1 36 IRb 0.000000 0 0 300 145 no 0.000000 1 0.000000 NA 1.000000 29.600000 trnI-GAU_part2 tRNA trnI-GAU trnI-GAU 88786 88821 1 36 IRb 0.000000 0 0 11 300 no 0.000000 1 0.000000 NA 1.000000 19.600000 IGS_094 igs trnI-GAU|trnA-UGC trnI-GAU-trnA-UGC 88822 88882 0 61 IRb 0.000000 0 0 47 300 no 0.000000 1 0.000000 NA 1.000000 22.300000 trnA-UGC_part1 tRNA trnA-UGC trnA-UGC 88883 88919 1 37 IRb 0.000000 0 0 108 300 no 0.000000 1 0.000000 NA 1.000000 26.900000 trnA-UGC_part2 tRNA trnA-UGC trnA-UGC 89733 89768 1 36 IRb 0.000000 0 0 58 300 no 0.000000 1 0.000000 NA 1.000000 23.100000 IGS_097 igs trnA-UGC|rrn23 trnA-UGC-rrn23 89769 89960 0 192 IRb 0.000000 0 0 94 300 no 0.000000 1 0.000000 NA 1.000000 25.800000 rrn23 rRNA rrn23 rrn23 89961 92786 1 2826 IRb 0.001062 3 0 286 300 no 1.000000 2 1.000000 NA 1.000000 56.600000 IGS_098 igs rrn23|rrn4.5 rrn23-rrn4.5 92787 92881 0 95 IRb 0.000000 0 0 300 205 no 0.000000 1 0.000000 NA 1.000000 33.800000 rrn4.5 rRNA rrn4.5 rrn4.5 92882 92985 1 104 IRb 0.000000 0 0 300 101 no 0.000000 1 0.000000 NA 1.000000 26.300000 IGS_099 igs rrn4.5|rrn5 rrn4.5-rrn5 92986 93256 0 271 IRb 0.033210 9 0 300 300 no 1.000000 2 1.000000 NA 1.000000 71.600000 rrn5 rRNA rrn5 rrn5 93257 93379 1 123 IRb 0.000000 0 0 16 300 no 0.000000 1 0.000000 NA 1.000000 20.000000 IGS_100 igs rrn5|rps7 rrn5-rps7 93380 96333 0 2954 IRb 0.002373 7 4 139 300 no 1.000000 2 1.000000 NA 0.998646 52.600000 rps7 gene rps7 rps7 96334 96786 1 453 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 36.900000 IGS_101 igs rps7|psbA rps7-psbA 96787 97236 0 450 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 36.900000 psbA gene psbA psbA 97237 98298 1 1062 IRb 0.000000 0 0 300 40 no 0.000000 1 0.000000 NA 1.000000 28.000000 IGS_102 igs psbA|trnH-GUG psbA-trnH-GUG 98299 98720 0 422 IRb 0.007109 3 0 300 79 no 1.000000 2 1.000000 NA 1.000000 50.100000 trnH-GUG tRNA trnH-GUG trnH-GUG 98721 98794 1 74 IRb 0.000000 0 0 287 5 no 0.000000 1 0.000000 NA 1.000000 19.100000 IGS_103 igs trnH-GUG|ycf2 trnH-GUG-ycf2 98795 99068 0 274 IRb 0.003650 1 0 300 300 no 1.000000 2 1.000000 NA 1.000000 54.600000 ycf2 gene ycf2 ycf2 99069 105392 1 6324 IRb 0.002530 16 0 268 92 no 1.000000 2 1.000000 NA 1.000000 45.900000 IGS_104 igs ycf2|trnN-GUU ycf2-trnN-GUU 105393 105921 0 529 IRb 0.005671 3 0 293 284 no 1.000000 2 1.000000 NA 1.000000 60.500000 trnN-GUU tRNA trnN-GUU trnN-GUU 105922 105993 -1 72 IRb 0.000000 0 0 231 212 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_105 igs trnN-GUU|ndhF trnN-GUU-ndhF 105994 106489 0 496 IRb 0.002016 1 0 300 29 no 1.000000 2 1.000000 NA 1.000000 44.900000 ndhF gene ndhF ndhF 106490 108670 -1 2181 SSC 0.450270 833 331 283 0 yes 1.000000 2 1.000000 NA 0.848235 79.300000 IGS_106 igs ndhF|rpl21 ndhF-rpl21 108671 108936 0 266 SSC 0.472973 105 44 0 1 no 1.000000 2 1.000000 NA 0.834586 74.100000 rpl21 gene rpl21 rpl21 108937 109350 1 414 SSC 0.467391 172 46 2 19 yes 1.000000 2 1.000000 NA 0.888889 78.100000 IGS_107 igs rpl21|rpl32 rpl21-rpl32 109351 109508 0 158 SSC 0.484615 63 28 8 1 no 1.000000 2 1.000000 NA 0.822785 73.800000 rpl32 gene rpl32 rpl32 109509 109733 1 225 SSC 0.459627 74 64 1 17 no 1.000000 2 1.000000 NA 0.715556 70.800000 IGS_108 igs rpl32|trnP-GGG rpl32-trnP-GGG 109734 109967 0 234 SSC 0.432692 90 26 28 1 no 1.000000 2 1.000000 NA 0.888889 75.700000 trnP-GGG tRNA trnP-GGG trnP-GGG 109968 110041 -1 74 SSC 0.414634 17 33 1 0 no 1.000000 2 1.000000 NA 0.554054 66.900000 IGS_109 igs trnP-GGG|trnL-UAG trnP-GGG-trnL-UAG 110042 110289 0 248 SSC 0.455026 86 59 1 0 no 1.000000 2 1.000000 NA 0.762097 72.100000 trnL-UAG tRNA trnL-UAG trnL-UAG 110290 110369 1 80 SSC 0.443038 35 1 1 4 no 1.000000 2 1.000000 NA 0.987500 73.800000 IGS_110 igs trnL-UAG|ccsA trnL-UAG-ccsA 110370 110538 0 169 SSC 0.427632 65 17 1 0 no 1.000000 2 1.000000 NA 0.899408 75.900000 ccsA gene ccsA ccsA 110539 111492 1 954 SSC 0.486779 405 122 0 1 yes 1.000000 2 1.000000 NA 0.872117 81.400000 IGS_111 igs ccsA|ndhD ccsA-ndhD 111493 111852 0 360 SSC 0.435185 141 36 1 0 yes 1.000000 2 1.000000 NA 0.900000 77.200000 ndhD gene ndhD ndhD 111853 113364 -1 1512 SSC 0.498459 647 214 0 2 yes 1.000000 2 1.000000 NA 0.858466 81.000000 IGS_112 igs ndhD|psaC ndhD-psaC 113365 113509 0 145 SSC 0.462121 61 13 1 0 no 1.000000 2 1.000000 NA 0.910345 76.200000 psaC gene psaC psaC 113510 113755 -1 246 SSC 0.478992 114 8 0 0 no 1.000000 2 1.000000 NA 0.967480 75.700000 IGS_113 igs psaC|ndhE psaC-ndhE 113756 114062 0 307 SSC 0.521127 148 23 3 2 no 1.000000 2 1.000000 NA 0.925081 76.900000 ndhE gene ndhE ndhE 114063 114362 -1 300 SSC 0.515152 153 3 0 2 yes 1.000000 2 1.000000 NA 0.990000 73.500000 IGS_114 igs ndhE|ndhG ndhE-ndhG 114363 114480 0 118 SSC 0.586207 68 2 0 1 no 1.000000 2 1.000000 NA 0.983051 74.100000 ndhG gene ndhG ndhG 114481 115074 -1 594 SSC 0.463878 244 68 0 10 yes 1.000000 2 1.000000 NA 0.885522 81.700000 IGS_115 igs ndhG|ndhI ndhG-ndhI 115075 115214 0 140 SSC 0.494118 42 55 5 6 no 1.000000 2 1.000000 NA 0.607143 68.100000 ndhI gene ndhI ndhI 115215 115751 -1 537 SSC 0.479821 214 91 48 0 yes 1.000000 2 1.000000 NA 0.830540 78.900000 IGS_116 igs ndhI|ndhA ndhI-ndhA 115752 115888 0 137 SSC 0.427350 50 20 4 4 no 1.000000 2 1.000000 NA 0.854015 74.900000 ndhA gene ndhA ndhA 115889 117800 -1 1912 SSC 0.453877 679 416 5 1 yes 1.000000 2 1.000000 NA 0.782427 78.100000 IGS_117 igs ndhA|ndhH ndhA-ndhH 117801 117801 0 1 SSC 0.000000 0 0 1 0 no 0.000000 1 0.000000 NA 1.000000 18.800000 ndhH gene ndhH ndhH 117802 118986 -1 1185 SSC 0.483483 483 186 2 3 yes 1.000000 2 1.000000 NA 0.843038 80.700000 IGS_118 igs ndhH|rps15 ndhH-rps15 118987 119114 0 128 SSC 0.525424 62 10 16 7 no 1.000000 2 1.000000 NA 0.921875 77.100000 rps15 gene rps15 rps15 119115 119384 -1 270 SSC 0.515748 131 16 1 2 yes 1.000000 2 1.000000 NA 0.940741 77.200000 IGS_119 igs rps15|ycf1 rps15-ycf1 119385 119585 0 201 SSC 0.493671 78 43 0 0 no 1.000000 2 1.000000 NA 0.786070 72.700000 ycf1 gene ycf1 ycf1 119586 124721 -1 5136 SSC 0.473317 1969 975 3 1 yes 1.000000 2 1.000000 NA 0.809969 73.500000 IGS_120 igs ycf1|chlN ycf1-chlN 124722 125071 0 350 SSC 0.455108 147 27 0 2 yes 1.000000 2 1.000000 NA 0.922857 77.600000 chlN gene chlN chlN 125072 126463 -1 1392 SSC 0.482082 565 220 1 1 yes 1.000000 2 1.000000 NA 0.841954 80.600000 IGS_121 igs chlN|chlL chlN-chlL 126464 126539 0 76 SSC 0.430556 31 4 1 1 yes 1.000000 2 1.000000 NA 0.947368 77.300000 chlL gene chlL chlL 126540 127418 -1 879 SSC 0.415954 292 177 2 237 yes 1.000000 2 1.000000 NA 0.798635 79.500000 IGS_122 igs chlL|trnN-GUU chlL-trnN-GUU 127419 127868 0 450 IRa 0.002222 1 0 72 300 no 1.000000 2 1.000000 NA 1.000000 47.300000 trnN-GUU tRNA trnN-GUU trnN-GUU 127869 127940 1 72 IRa 0.000000 0 0 212 231 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_123 igs trnN-GUU|ycf2 trnN-GUU-ycf2 127941 128469 0 529 IRa 0.005671 3 0 284 293 no 1.000000 2 1.000000 NA 1.000000 60.500000 ycf2 gene ycf2 ycf2 128470 134793 -1 6324 IRa 0.002530 16 0 92 268 no 1.000000 2 1.000000 NA 1.000000 45.900000 IGS_124 igs ycf2|trnH-GUG ycf2-trnH-GUG 134794 135067 0 274 IRa 0.003650 1 0 300 300 no 1.000000 2 1.000000 NA 1.000000 54.600000 trnH-GUG tRNA trnH-GUG trnH-GUG 135068 135141 -1 74 IRa 0.000000 0 0 5 287 no 0.000000 1 0.000000 NA 1.000000 19.100000 IGS_125 igs trnH-GUG|psbA trnH-GUG-psbA 135142 135563 0 422 IRa 0.007109 3 0 79 300 no 1.000000 2 1.000000 NA 1.000000 50.100000 psbA gene psbA psbA 135564 136625 -1 1062 IRa 0.000000 0 0 40 300 no 0.000000 1 0.000000 NA 1.000000 28.000000 IGS_126 igs psbA|rps7 psbA-rps7 136626 137075 0 450 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 36.900000 rps7 gene rps7 rps7 137076 137528 -1 453 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 36.900000 IGS_127 igs rps7|rps12 rps7-rps12 137529 137607 0 79 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 rps12_part2 gene rps12 rps12 137608 138415 -1 808 IRa 0.000000 0 0 300 149 no 0.000000 1 0.000000 NA 1.000000 36.200000 IGS_128 igs rps12|rrn5 rps12-rrn5 138416 140482 0 2067 IRa 0.003393 7 4 300 139 no 1.000000 2 1.000000 NA 0.998065 55.100000 rrn5 rRNA rrn5 rrn5 140483 140605 -1 123 IRa 0.000000 0 0 300 16 no 0.000000 1 0.000000 NA 1.000000 20.000000 IGS_129 igs rrn5|rrn4.5 rrn5-rrn4.5 140606 140876 0 271 IRa 0.033210 9 0 300 300 no 1.000000 2 1.000000 NA 1.000000 71.600000 rrn4.5 rRNA rrn4.5 rrn4.5 140877 140980 -1 104 IRa 0.000000 0 0 101 300 no 0.000000 1 0.000000 NA 1.000000 26.300000 IGS_130 igs rrn4.5|rrn23 rrn4.5-rrn23 140981 141075 0 95 IRa 0.000000 0 0 205 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 rrn23 rRNA rrn23 rrn23 141076 143901 -1 2826 IRa 0.001062 3 0 300 286 no 1.000000 2 1.000000 NA 1.000000 56.600000 IGS_131 igs rrn23|trnA-UGC rrn23-trnA-UGC 143902 144093 0 192 IRa 0.000000 0 0 300 94 no 0.000000 1 0.000000 NA 1.000000 25.800000 trnA-UGC_part2 tRNA trnA-UGC trnA-UGC 144094 144129 -1 36 IRa 0.000000 0 0 300 58 no 0.000000 1 0.000000 NA 1.000000 23.100000 trnA-UGC_part1 tRNA trnA-UGC trnA-UGC 144943 144979 -1 37 IRa 0.000000 0 0 300 108 no 0.000000 1 0.000000 NA 1.000000 26.900000 IGS_134 igs trnA-UGC|trnI-GAU trnA-UGC-trnI-GAU 144980 145040 0 61 IRa 0.000000 0 0 300 47 no 0.000000 1 0.000000 NA 1.000000 22.300000 trnI-GAU_part2 tRNA trnI-GAU trnI-GAU 145041 145076 -1 36 IRa 0.000000 0 0 300 11 no 0.000000 1 0.000000 NA 1.000000 19.600000 trnI-GAU_part1 tRNA trnI-GAU trnI-GAU 146144 146179 -1 36 IRa 0.000000 0 0 145 300 no 0.000000 1 0.000000 NA 1.000000 29.600000 IGS_137 igs trnI-GAU|rrn16 trnI-GAU-rrn16 146180 146462 0 283 IRa 0.000000 0 50 181 300 no 1.000000 2 1.000000 NA 0.823322 52.400000 rrn16 rRNA rrn16 rrn16 146463 147962 -1 1500 IRa 0.000000 0 0 300 127 no 0.000000 1 0.000000 NA 1.000000 34.500000 IGS_138 igs rrn16|trnR-ACG rrn16-trnR-ACG 147963 148899 0 937 IRa 0.036471 31 87 300 134 yes 1.000000 2 1.000000 NA 0.907150 78.000000 trnR-ACG tRNA trnR-ACG trnR-ACG 148900 148973 1 74 IRa 0.000000 0 0 87 60 no 0.000000 1 0.000000 NA 1.000000 23.200000 IGS_139 igs trnR-ACG|ndhB trnR-ACG-ndhB 148974 149025 0 52 IRa 0.000000 0 4 161 8 no 1.000000 2 1.000000 NA 0.923077 42.200000 ndhB_part2 gene ndhB ndhB 149026 149531 -1 506 IRa 0.003953 2 0 213 100 no 1.000000 2 1.000000 NA 1.000000 51.600000