primer_id label_name rank fwd_seq rev_seq fwd_len rev_len fwd_gc rev_gc fwd_tm rev_tm fwd_self_any_th rev_self_any_th primer3_penalty target_start target_end amplicon_size cross_species_success_rate primer_score cbbX-trnM(cat)_p1 cbbX-trnM(cat) 1 TGTGTAAACTTTCCTCTATTTTGT CGACCTTGGGCTTATGAGTC 24 20 29.2 55.0 54.7 58.1 0.0 0.0 7.404978 4026 4161 258-258 1.000000 41.6 cbbX-trnM(cat)_p2 cbbX-trnM(cat) 2 TCTTCATCAAGTTTGTGTAAAC CGACCTTGGGCTTATGAGTC 22 20 31.8 55.0 52.9 58.1 0.0 0.0 7.115775 4026 4161 271-271 1.000000 41.5 cbbX-trnM(cat)_p3 cbbX-trnM(cat) 3 TCTTCATCAAGTTTGTGTAAAC CTTTGGCTGGACTTGAACCT 22 20 31.8 50.0 52.9 58.0 0.0 0.0 7.070217 4026 4161 292-292 1.000000 41.4 cbbX-trnM(cat)_p4 cbbX-trnM(cat) 4 TGTGTAAACTTTCCTCTATTTTGT CTTTGGCTGGACTTGAACCT 24 20 29.2 50.0 54.7 58.0 0.0 0.0 7.359421 4026 4161 279-279 1.000000 41.4 cbbX-trnM(cat)_p5 cbbX-trnM(cat) 5 TCTTCATCAAGTTTGTGTAAAC TTTGGCTGGACTTGAACCTG 22 20 31.8 50.0 52.9 58.3 0.0 0.0 7.365903 4026 4161 291-291 1.000000 41.4 dnaK-trnF(gaa)_p1 dnaK-trnF(gaa) 1 TGAAAGATTTAGAAGAAGAATTAGCT ACCAACTGAGCTATTTGGGC 26 20 26.9 50.0 55.0 58.2 0.0 19.6 9.177601 27294 27411 182-182 1.000000 44.8 dnaK-trnF(gaa)_p2 dnaK-trnF(gaa) 2 TGAAAGATTTAGAAGAAGAATTAGCT ACGGATCTTCAGTCCATTGC 26 20 26.9 50.0 55.0 58.0 0.0 0.0 9.046862 27294 27411 205-205 1.000000 44.3 dnaK-trnF(gaa)_p3 dnaK-trnF(gaa) 3 TGAAAGATTTAGAAGAAGAATTAGCT CGGATCTTCAGTCCATTGCT 26 20 26.9 50.0 55.0 57.7 0.0 0.0 9.339380 27294 27411 204-204 1.000000 44.3 dnaK-trnF(gaa)_p4 dnaK-trnF(gaa) 4 TGAAAGATTTAGAAGAAGAATTAGCT GACACACGGATCTTCAGTCC 26 20 26.9 55.0 55.0 58.0 0.0 0.0 9.019355 27294 27411 210-210 1.000000 44.2 dnaK-trnF(gaa)_p5 dnaK-trnF(gaa) 5 TGAAAGATTTAGAAGAAGAATTAGC GACACACGGATCTTCAGTCC 25 20 28.0 55.0 53.7 58.0 0.0 0.0 9.332376 27294 27411 210-210 1.000000 44.2 trnF(gaa)-trnC(gca)_p1 trnF(gaa)-trnC(gca) 1 GCAATGGACTGAAGATCCGT CCTTACCACTTGGCGATACC 20 20 50.0 55.0 58.0 58.1 0.0 0.0 0.080373 27485 27494 83-83 1.000000 81.3 trnF(gaa)-trnC(gca)_p2 trnF(gaa)-trnC(gca) 2 GGACTGAAGATCCGTGTGTC ATAAGTTTAAGGCGGCACCC 20 20 55.0 50.0 58.0 58.2 0.0 13.1 0.243395 27485 27494 136-136 1.000000 79.2 trnF(gaa)-trnC(gca)_p3 trnF(gaa)-trnC(gca) 3 GCAATGGACTGAAGATCCGT ATAAGTTTAAGGCGGCACCC 20 20 50.0 50.0 58.0 58.2 0.0 13.1 0.270902 27485 27494 141-141 1.000000 79.0 trnF(gaa)-trnC(gca)_p4 trnF(gaa)-trnC(gca) 4 AGCAATGGACTGAAGATCCG CCTTACCACTTGGCGATACC 20 20 50.0 55.0 57.7 58.1 0.0 0.0 0.372890 27485 27494 84-84 1.000000 78.9 trnF(gaa)-trnC(gca)_p5 trnF(gaa)-trnC(gca) 5 GGACTGAAGATCCGTGTGTC TTGCAATCCACTGCCTTACC 20 20 55.0 50.0 58.0 58.5 0.0 0.0 0.457607 27485 27494 91-91 1.000000 78.1 trnN(gtt)-clpN_p1 trnN(gtt)-clpN 1 TGTTCTGGCAACTTTGACCA ACAATCCCTGGCTTTGTACG 20 20 45.0 50.0 57.9 58.2 0.0 9.8 0.315082 33684 33786 1142-1151 1.000000 81.0 trnN(gtt)-clpN_p2 trnN(gtt)-clpN 2 CCGATTGCTCTACCACTGAG ACAATCCCTGGCTTTGTACG 20 20 55.0 50.0 57.8 58.2 0.0 9.8 0.394691 33684 33786 692-692 1.000000 80.4 trnN(gtt)-clpN_p3 trnN(gtt)-clpN 3 AAACCTGCGTGTCTAGCTTC ACAATCCCTGGCTTTGTACG 20 20 50.0 50.0 58.2 58.2 0.0 9.8 0.381759 33684 33786 1304-1313 1.000000 80.1 trnN(gtt)-clpN_p4 trnN(gtt)-clpN 4 AAAAACCTGCGTGTCTAGCT ACAATCCCTGGCTTTGTACG 20 20 45.0 50.0 57.7 58.2 0.0 9.8 0.434901 33684 33786 1306-1315 1.000000 79.6 trnN(gtt)-clpN_p5 trnN(gtt)-clpN 5 AAAACCTGCGTGTCTAGCTT ACAATCCCTGGCTTTGTACG 20 20 45.0 50.0 57.7 58.2 0.0 9.8 0.434901 33684 33786 1305-1314 1.000000 79.6 clpN_p1 clpN 1 TGTTCTGGCAACTTTGACCA ATGCTACACATTCTGCAGCA 20 20 45.0 45.0 57.9 57.9 0.0 9.5 0.254612 33787 34251 1618-1627 1.000000 81.0 clpN_p2 clpN 2 TGTTCTGGCAACTTTGACCA TGCTACACATTCTGCAGCAT 20 20 45.0 45.0 57.9 57.9 0.0 9.5 0.254612 33787 34251 1617-1626 1.000000 81.0 clpN_p3 clpN 3 TGTTCTGGCAACTTTGACCA ACAATCCCTGGCTTTGTACG 20 20 45.0 50.0 57.9 58.2 0.0 9.8 0.315082 33787 34251 1142-1151 1.000000 81.0 clpN_p4 clpN 4 CCGATTGCTCTACCACTGAG ATGCTACACATTCTGCAGCA 20 20 55.0 45.0 57.8 57.9 0.0 9.5 0.334220 33787 34251 1168-1168 1.000000 80.3 clpN_p5 clpN 5 CCGATTGCTCTACCACTGAG TGCTACACATTCTGCAGCAT 20 20 55.0 45.0 57.8 57.9 0.0 9.5 0.334220 33787 34251 1167-1167 1.000000 80.3 trnI(gau)-ssrA_p1 trnI(gau)-ssrA 1 TCGAACCAGCGATGTTCTTT TTCAACTCCTACCAGCTCCA 20 20 45.0 50.0 57.8 58.0 0.0 0.0 0.187994 36964 36987 115-115 1.000000 79.9 trnI(gau)-ssrA_p2 trnI(gau)-ssrA 2 TTCGAACCAGCGATGTTCTT TTCAACTCCTACCAGCTCCA 20 20 45.0 50.0 57.8 58.0 0.0 0.0 0.187994 36964 36987 116-116 1.000000 79.9 trnI(gau)-ssrA_p3 trnI(gau)-ssrA 3 TCGAACCAGCGATGTTCTTT AGGTTCAACTCCTACCAGCT 20 20 45.0 50.0 57.8 58.0 0.0 0.0 0.195313 36964 36987 118-118 1.000000 79.8 trnI(gau)-ssrA_p4 trnI(gau)-ssrA 4 TTCGAACCAGCGATGTTCTT AGGTTCAACTCCTACCAGCT 20 20 45.0 50.0 57.8 58.0 0.0 0.0 0.195313 36964 36987 119-119 1.000000 79.8 trnI(gau)-ssrA_p5 trnI(gau)-ssrA 5 CATTAAATGCATCCGGCTGG TTCAACTCCTACCAGCTCCA 20 20 50.0 50.0 57.6 58.0 4.7 0.0 0.451407 36964 36987 137-137 1.000000 77.6 trnR(ccg)-trnP(tgg)_p1 trnR(ccg)-trnP(tgg) 1 TGAACCCATACTCTCTGGCA TACCAAACTGCGCTACATCC 20 20 50.0 50.0 58.0 58.0 0.0 9.7 0.067333 37341 37534 273-276 1.000000 84.7 trnR(ccg)-trnP(tgg)_p2 trnR(ccg)-trnP(tgg) 2 CTCTGGCATCGGAAACCATT TACCAAACTGCGCTACATCC 20 20 50.0 50.0 58.2 58.0 3.2 9.7 0.263362 37341 37534 261-264 1.000000 83.4 trnR(ccg)-trnP(tgg)_p3 trnR(ccg)-trnP(tgg) 3 TGAACCCATACTCTCTGGCA CTGTGACATTCTGCTCCCAA 20 20 50.0 50.0 58.0 57.8 0.0 0.0 0.238384 37341 37534 304-307 1.000000 82.8 trnR(ccg)-trnP(tgg)_p4 trnR(ccg)-trnP(tgg) 4 TGAACCCATACTCTCTGGCA AACCTGTGACATTCTGCTCC 20 20 50.0 50.0 58.0 57.8 0.0 0.0 0.239918 37341 37534 307-310 1.000000 82.7 trnR(ccg)-trnP(tgg)_p5 trnR(ccg)-trnP(tgg) 5 AAAACCACATAACAGCCCCA TACCAAACTGCGCTACATCC 20 20 45.0 50.0 57.6 58.0 0.0 9.7 0.408767 37341 37534 311-314 1.000000 81.3 rpl27_p1 rpl27 1 CGCTAGCATCTTACGGTTCA TCAAGACGAGTAAGGTTTGACA 20 22 50.0 40.9 57.8 57.3 16.4 0.0 2.862911 47681 47998 488-488 1.000000 59.1 rpl27_p2 rpl27 2 CGCTAGCATCTTACGGTTCA TCAAGACGAGTAAGGTTTGACAA 20 23 50.0 39.1 57.8 58.0 16.4 0.0 3.217368 47681 47998 488-488 1.000000 56.2 rpl27_p3 rpl27 3 CGCTAGCATCTTACGGTTCA TTCAAGACGAGTAAGGTTTGACA 20 23 50.0 39.1 57.8 58.0 16.4 0.0 3.217368 47681 47998 489-489 1.000000 56.2 rpl27_p4 rpl27 4 CGCTAGCATCTTACGGTTCA CAAGACGAGTAAGGTTTGACA 20 21 50.0 42.9 57.8 55.9 16.4 0.0 3.331426 47681 47998 487-487 1.000000 55.3 rpl27_p5 rpl27 5 ACTTTTGGATCAACAACCGC TCAAGACGAGTAAGGTTTGACA 20 22 45.0 40.9 57.2 57.3 0.0 0.0 3.452389 47681 47998 514-514 1.000000 54.2 rpl21-eboF_p1 rpl21-eboF 1 TCAACCCAAAATTGTCTACCGA ATCATGCAACATTTAAAAGATTAG 22 24 40.9 25.0 57.9 52.4 0.0 0.0 11.650819 48459 48913 532-532 1.000000 43.2 rpl21-eboF_p2 rpl21-eboF 2 TCGGTTCAACCCAAAATTGTC ATCATGCAACATTTAAAAGATTAG 21 24 42.9 25.0 57.3 52.4 0.0 0.0 11.281937 48459 48913 537-537 1.000000 43.1 rpl21-eboF_p3 rpl21-eboF 3 CGGTTCAACCCAAAATTGTCT ATCATGCAACATTTAAAAGATTAG 21 24 42.9 25.0 57.3 52.4 0.0 0.0 11.289054 48459 48913 536-536 1.000000 43.1 rpl21-eboF_p4 rpl21-eboF 4 TCGGTTCAACCCAAAATTGT ATCATGCAACATTTAAAAGATTAG 20 24 40.0 25.0 56.1 52.4 0.0 0.0 11.506984 48459 48913 537-537 1.000000 43.1 rpl21-eboF_p5 rpl21-eboF 5 TTCGGTTCAACCCAAAATTGTC ATCATGCAACATTTAAAAGATTAG 22 24 40.9 25.0 58.0 52.4 0.0 0.0 11.611004 48459 48913 538-538 1.000000 43.1 eboE_p1 eboE 1 GCCTTGGCGTAACAGAGTAA AGAATTCGTCACGGAGAAGC 20 20 50.0 50.0 57.9 58.0 0.0 0.0 0.091280 50291 51502 1925-1925 1.000000 82.5 eboE_p2 eboE 2 GCCTTGGCGTAACAGAGTAA GGATAGCCGGAATTGCTGAA 20 20 50.0 50.0 57.9 58.0 0.0 5.0 0.121631 50291 51502 2179-2179 1.000000 82.0 eboE_p3 eboE 3 GAAGATGTGACAGCAGGGAG AGAATTCGTCACGGAGAAGC 20 20 55.0 50.0 58.0 58.0 2.9 0.0 0.023686 50291 51502 1692-1692 0.500000 59.8 eboE_p4 eboE 4 GAAGATGTGACAGCAGGGAG GGATAGCCGGAATTGCTGAA 20 20 55.0 50.0 58.0 58.0 2.9 5.0 0.054037 50291 51502 1946-1946 0.500000 59.6 eboE_p5 eboE 5 GTGACAGCAGGGAGTAAAGG AGAATTCGTCACGGAGAAGC 20 20 55.0 50.0 57.9 58.0 0.0 0.0 0.102936 50291 51502 1686-1686 0.500000 59.2 eboC_p1 eboC 1 AGCATATTCAAAATTAACCGTAA TCAGTGCTAAGAGGCCAAGA 23 20 26.1 50.0 52.8 58.4 0.0 5.0 8.560360 52691 53581 1033-1033 1.000000 42.7 eboC_p2 eboC 2 AGCATATTCAAAATTAACCGTAA CAGTGCTAAGAGGCCAAGAA 23 20 26.1 50.0 52.8 57.5 0.0 5.0 8.684435 52691 53581 1032-1032 1.000000 42.7 eboC_p3 eboC 3 AGCATATTCAAAATTAACCGTAA TTCAGTGCTAAGAGGCCAAG 23 20 26.1 50.0 52.8 57.5 0.0 5.0 8.684435 52691 53581 1034-1034 1.000000 42.7 eboC_p4 eboC 4 AGCATATTCAAAATTAACCGTAAA TCAGTGCTAAGAGGCCAAGA 24 20 25.0 50.0 53.6 58.4 0.0 5.0 8.748823 52691 53581 1033-1033 1.000000 42.7 eboC_p5 eboC 5 ATAGCATATTCAAAATTAACCGT TCAGTGCTAAGAGGCCAAGA 23 20 26.1 50.0 52.6 58.4 0.0 5.0 8.775674 52691 53581 1035-1035 1.000000 42.7 rps6-ccsA_p1 rps6-ccsA 1 ACGTGAATGGGGAGGTTCTA TATTTCTGGAGCGGTTTGGG 20 20 50.0 50.0 58.1 57.9 0.0 0.0 0.175799 64142 64191 485-490 1.000000 81.4 rps6-ccsA_p2 rps6-ccsA 2 TACGTGAATGGGGAGGTTCT TATTTCTGGAGCGGTTTGGG 20 20 50.0 50.0 58.1 57.9 0.0 0.0 0.175799 64142 64191 486-491 1.000000 81.4 rps6-ccsA_p3 rps6-ccsA 3 ACGTGAATGGGGAGGTTCTA CAGCCTTTTCGTCTTCAGGA 20 20 50.0 50.0 58.1 57.8 0.0 0.0 0.222848 64142 64191 627-632 1.000000 80.5 rps6-ccsA_p4 rps6-ccsA 4 TACGTGAATGGGGAGGTTCT CAGCCTTTTCGTCTTCAGGA 20 20 50.0 50.0 58.1 57.8 0.0 0.0 0.222848 64142 64191 628-633 1.000000 80.5 rps6-ccsA_p5 rps6-ccsA 5 AGGCTTACAAGTTCGTGGTG TATTTCTGGAGCGGTTTGGG 20 20 50.0 50.0 58.1 57.9 0.0 0.0 0.243830 64142 64191 831-836 1.000000 79.9 ccsA-sufB_p1 ccsA-sufB 1 ACTTGTTGTTGACCCAACCA CGTTCTTGAAAACGTGAATCG 20 21 45.0 42.9 57.8 56.5 7.3 0.0 2.728121 65101 66042 1082-1087 1.000000 66.0 ccsA-sufB_p2 ccsA-sufB 2 TTGTTGTTGACCCAACCAGT CGTTCTTGAAAACGTGAATCG 20 21 45.0 42.9 57.8 56.5 7.3 0.0 2.728121 65101 66042 1080-1085 1.000000 66.0 ccsA-sufB_p3 ccsA-sufB 3 CTTGTTGTTGACCCAACCAG CGTTCTTGAAAACGTGAATCG 20 21 50.0 42.9 57.1 56.5 7.3 0.0 3.373551 65101 66042 1081-1086 1.000000 60.8 ccsA-sufB_p4 ccsA-sufB 4 AGCTACTTGTTGTTGACCCA CGTTCTTGAAAACGTGAATCG 20 21 45.0 42.9 57.0 56.5 0.0 0.0 3.525543 65101 66042 1086-1091 1.000000 59.6 ccsA-sufB_p5 ccsA-sufB 5 TTGTTGTTGACCCAACCAGT CACGTAAAGGTTTAACACATCGT 20 23 45.0 39.1 57.8 57.7 7.3 0.0 3.556849 65101 66042 1100-1105 1.000000 59.2 trnG(gcc)-ycf12_p1 trnG(gcc)-ycf12 1 CGTTCAAATCGCGTTACTCG ATCCCTGTTACCTCCGTGAA 20 20 50.0 50.0 58.0 58.1 5.8 0.0 0.093226 70405 70467 385-385 1.000000 82.0 trnG(gcc)-ycf12_p2 trnG(gcc)-ycf12 2 CGTTCAAATCGCGTTACTCG AATCCCTGTTACCTCCGTGA 20 20 50.0 50.0 58.0 58.1 5.8 0.0 0.093226 70405 70467 386-386 1.000000 81.9 trnG(gcc)-ycf12_p3 trnG(gcc)-ycf12 3 GGGTTTGGGTTGCTAACTCA AATCCCTGTTACCTCCGTGA 20 20 50.0 50.0 58.0 58.1 0.0 0.0 0.063309 70405 70467 861-866 1.000000 81.6 trnG(gcc)-ycf12_p4 trnG(gcc)-ycf12 4 GGGTTTGGGTTGCTAACTCA ATCCCTGTTACCTCCGTGAA 20 20 50.0 50.0 58.0 58.1 0.0 0.0 0.063309 70405 70467 860-865 1.000000 81.6 trnG(gcc)-ycf12_p5 trnG(gcc)-ycf12 5 GGGTTTGGGTTGCTAACTCA CTGTTACCTCCGTGAAAGGG 20 20 50.0 55.0 58.0 57.9 0.0 0.0 0.105056 70405 70467 856-861 1.000000 81.3 petA-thiS_p1 petA-thiS 1 GTTCAGGCTGCAGAGATGAA TGTTACTATAGTTGGGGGTGGT 20 22 50.0 45.5 57.9 58.2 20.4 11.4 2.299244 91164 91238 127-127 1.000000 66.6 petA-thiS_p2 petA-thiS 2 AAGTTCAGGCTGCAGAGATG TGTTACTATAGTTGGGGGTGGT 20 22 50.0 45.5 57.9 58.2 20.4 11.4 2.305140 91164 91238 129-129 1.000000 66.5 petA-thiS_p3 petA-thiS 3 GAAAGTTCAGGCTGCAGAGA TGTTACTATAGTTGGGGGTGGT 20 22 50.0 45.5 57.8 58.2 20.4 11.4 2.370116 91164 91238 131-131 1.000000 65.9 petA-thiS_p4 petA-thiS 4 GAGAAAGTTCAGGCTGCAGA TGTTACTATAGTTGGGGGTGGT 20 22 50.0 45.5 57.8 58.2 20.4 11.4 2.370116 91164 91238 133-133 1.000000 65.9 petA-thiS_p5 petA-thiS 5 AGAAAGTTCAGGCTGCAGAG TGTTACTATAGTTGGGGGTGGT 20 22 50.0 45.5 57.8 58.2 20.4 11.4 2.376192 91164 91238 132-132 1.000000 65.8 psaI-psbJ_p1 psaI-psbJ 1 AGCACGTGCAGAAATAGGTT CTTGTAGCTTTTGTTGCGGG 20 20 45.0 50.0 57.8 57.9 39.2 0.0 0.235481 104447 104748 1057-1058 1.000000 86.1 psaI-psbJ_p2 psaI-psbJ 2 AAACCAATGATCGACGAGCA CTTGTAGCTTTTGTTGCGGG 20 20 45.0 50.0 57.9 57.9 19.1 0.0 0.143783 104447 104748 1073-1073 0.500000 58.8 psaI-psbJ_p3 psaI-psbJ 3 AAACCAATGATCGACGAGCA AGACCGTCAACAAGTTCCAC 20 20 45.0 50.0 57.9 58.1 19.1 0.4 0.143841 104447 104748 1529-1529 0.500000 58.8 psaI-psbJ_p4 psaI-psbJ 4 AAACCAATGATCGACGAGCA GACCGTCAACAAGTTCCACT 20 20 45.0 50.0 57.9 58.1 19.1 0.0 0.143841 104447 104748 1528-1528 0.500000 58.8 psaI-psbJ_p5 psaI-psbJ 5 AAACCAATGATCGACGAGCA CTCAATCCTCATATGGCGGG 20 20 45.0 55.0 57.9 57.9 19.1 2.1 0.198312 104447 104748 1714-1714 0.500000 58.4 ycf95_p1 ycf95 1 TTAGTGCGGATGGAGAGACT AAAACACGCCTTGAAGGACT 20 20 50.0 45.0 57.9 57.9 0.0 16.9 0.198179 125700 126050 911-928 1.000000 80.3 ycf95_p2 ycf95 2 TTAGTGCGGATGGAGAGACT AAACACGCCTTGAAGGACTT 20 20 50.0 45.0 57.9 57.9 0.0 16.9 0.198179 125700 126050 910-927 1.000000 80.3 ycf95_p3 ycf95 3 TTAGTGCGGATGGAGAGACT GAAGGACTTGAACCCTCGAC 20 20 50.0 55.0 57.9 57.9 0.0 0.0 0.227122 125700 126050 899-916 1.000000 80.1 ycf95_p4 ycf95 4 TAGTGCGGATGGAGAGACTC AAAACACGCCTTGAAGGACT 20 20 55.0 45.0 58.3 57.9 0.0 16.9 0.371244 125700 126050 910-927 1.000000 78.9 ycf95_p5 ycf95 5 TAGTGCGGATGGAGAGACTC AAACACGCCTTGAAGGACTT 20 20 55.0 45.0 58.3 57.9 0.0 16.9 0.371244 125700 126050 909-926 1.000000 78.9