primer_id label_name rank fwd_seq rev_seq fwd_len rev_len fwd_gc rev_gc fwd_tm rev_tm fwd_self_any_th rev_self_any_th primer3_penalty target_start target_end amplicon_size cross_species_success_rate primer_score trnQ-UUG-psbK_p1 trnQ-UUG-psbK 1 TGAATATGCTCTGGGACGGA AAAAAGCGTAGGCCTCGG 20 18 50.0 55.6 58.2 57.7 0.0 9.7 2.508036 7512 8070 731-889 1.000000 67.9 trnQ-UUG-psbK_p2 trnQ-UUG-psbK 2 GACCAAAACCCGTTGCCTTA AAAAAGCGTAGGCCTCGG 20 18 50.0 55.6 58.7 57.7 0.0 9.7 2.975758 7512 8070 687-845 1.000000 64.4 trnQ-UUG-psbK_p3 trnQ-UUG-psbK 3 ATGAATATGCTCTGGGACGG AAAAAGCGTAGGCCTCGG 20 18 50.0 55.6 57.2 57.7 0.0 9.7 3.143592 7512 8070 732-890 1.000000 62.8 trnQ-UUG-psbK_p4 trnQ-UUG-psbK 4 GAATATGCTCTGGGACGGAA AAAAAGCGTAGGCCTCGG 20 18 50.0 55.6 57.1 57.7 0.0 9.7 3.206953 7512 8070 730-888 1.000000 62.3 trnQ-UUG-psbK_p5 trnQ-UUG-psbK 5 AATATGCTCTGGGACGGAAG AAAAAGCGTAGGCCTCGG 20 18 50.0 55.6 57.1 57.7 0.0 9.7 3.214977 7512 8070 729-887 1.000000 62.2 trnE-UUC-trnT-GGU_p1 trnE-UUC-trnT-GGU 1 AGATGTCCTGAACCGCTAGA GAACCGATGACTTACGCCTT 20 20 50.0 50.0 57.9 58.0 0.0 0.0 0.151367 35846 36723 949-1053 1.000000 84.3 trnE-UUC-trnT-GGU_p2 trnE-UUC-trnT-GGU 2 ACTTCCTTTCCTAGTCCCCC GAACCGATGACTTACGCCTT 20 20 55.0 50.0 58.0 58.0 0.0 0.0 0.037693 35846 36723 1011-1115 0.916667 81.3 trnE-UUC-trnT-GGU_p3 trnE-UUC-trnT-GGU 3 CTTCCTTTCCTAGTCCCCCA GAACCGATGACTTACGCCTT 20 20 55.0 50.0 58.0 58.0 0.0 0.0 0.039125 35846 36723 1010-1114 0.916667 81.3 trnE-UUC-trnT-GGU_p4 trnE-UUC-trnT-GGU 4 ACTTCCTTTCCTAGTCCCCC TACCGCTGAGTTAAAAGGGC 20 20 55.0 50.0 58.0 57.9 0.0 0.0 0.135259 35846 36723 976-1080 0.916667 80.7 trnE-UUC-trnT-GGU_p5 trnE-UUC-trnT-GGU 5 CTTCCTTTCCTAGTCCCCCA TACCGCTGAGTTAAAAGGGC 20 20 55.0 50.0 58.0 57.9 0.0 0.0 0.136692 35846 36723 975-1079 0.916667 80.7 rps4-trnT-UGU_p1 rps4-trnT-UGU 1 TCCCGAACGAGATTGGTTTC CTCAGAGGTTAGAGCATCGC 20 20 50.0 55.0 57.9 57.9 0.0 0.0 0.221690 51373 51822 515-643 1.000000 85.0 rps4-trnT-UGU_p2 rps4-trnT-UGU 2 CCCGAACGAGATTGGTTTCT CTCAGAGGTTAGAGCATCGC 20 20 50.0 55.0 57.9 57.9 0.0 0.0 0.227502 51373 51822 514-642 1.000000 84.9 rps4-trnT-UGU_p3 rps4-trnT-UGU 3 TCCCGAACGAGATTGGTTTC ATGGTCATCGGTTCGATTCC 20 20 50.0 50.0 57.9 57.8 0.0 0.0 0.329443 51373 51822 483-611 1.000000 84.3 rps4-trnT-UGU_p4 rps4-trnT-UGU 4 GATCATTTCCGGCTCTAGGC CTCAGAGGTTAGAGCATCGC 20 20 55.0 55.0 58.2 57.9 0.0 0.0 0.330671 51373 51822 492-620 1.000000 84.2 rps4-trnT-UGU_p5 rps4-trnT-UGU 5 CCCGAACGAGATTGGTTTCT ATGGTCATCGGTTCGATTCC 20 20 50.0 50.0 57.9 57.8 0.0 0.0 0.335256 51373 51822 482-610 1.000000 84.2 ndhC-trnV-UAC_p1 ndhC-trnV-UAC 1 GTCCTTTGTTAATCGGGGCT AGAAGGTCTACGGTTCGAGT 20 20 50.0 50.0 57.9 57.8 0.0 0.0 0.321560 56026 57448 1503-1717 1.000000 84.5 ndhC-trnV-UAC_p2 ndhC-trnV-UAC 2 GGGGCTAAAACTCCGGAAAT AGAAGGTCTACGGTTCGAGT 20 20 50.0 50.0 57.9 57.8 5.2 0.0 0.336606 56026 57448 1489-1703 1.000000 84.4 ndhC-trnV-UAC_p3 ndhC-trnV-UAC 3 GTCCTTTGTTAATCGGGGCT GAAGGTCTACGGTTCGAGTC 20 20 50.0 55.0 57.9 57.5 0.0 0.0 0.665332 56026 57448 1502-1716 1.000000 81.8 ndhC-trnV-UAC_p4 ndhC-trnV-UAC 4 GGGGCTAAAACTCCGGAAAT GAAGGTCTACGGTTCGAGTC 20 20 50.0 55.0 57.9 57.5 5.2 0.0 0.680379 56026 57448 1488-1702 1.000000 81.7 ndhC-trnV-UAC_p5 ndhC-trnV-UAC 5 TGGTCCTTTGTTAATCGGGG AGAAGGTCTACGGTTCGAGT 20 20 50.0 50.0 57.5 57.8 0.0 0.0 0.697675 56026 57448 1505-1719 1.000000 81.5 ndhF_p1 ndhF 1 TGGCTTGGAGCACTAGTACT TGGGGTCGGTTTAATTTGCA 20 20 50.0 45.0 58.1 58.0 0.0 0.0 0.064617 115589 117808 2907-2991 0.833333 76.5 ndhF_p2 ndhF 2 AGCCCTTTTTCGGTGTTCTT TGGGGTCGGTTTAATTTGCA 20 20 45.0 45.0 57.9 58.0 0.0 0.0 0.070567 115589 117808 2843-2927 0.833333 76.5 ndhF_p3 ndhF 3 AGGCCGAATCTGCACAAAAT TGGGGTCGGTTTAATTTGCA 20 20 45.0 45.0 58.5 58.0 0.0 0.0 0.453998 115589 117808 2701-2747 0.833333 71.9 ndhF_p4 ndhF 4 TGGCTTGGAGCACTAGTACT TAACCGGTTAAATGGGGTCG 20 20 50.0 50.0 58.1 57.6 0.0 24.7 0.461332 115589 117808 2919-2980 0.750000 69.2 ndhF_p5 ndhF 5 AGGAAAGAAGGCCGAATCTG TGGGGTCGGTTTAATTTGCA 20 20 50.0 45.0 57.6 58.0 9.2 0.0 0.413150 115589 117808 2709-2733 0.750000 68.5 ndhF-rpl32_p1 ndhF-rpl32 1 CTTGAGGTCGTGTGAACCAA GTTCGAAACCTCTCCCCATC 20 20 50.0 55.0 58.1 58.0 0.0 0.0 0.077484 117809 118599 1644-1881 0.750000 75.4 ndhF-rpl32_p2 ndhF-rpl32 2 CTTGAGGTCGTGTGAACCAA TCGAAACCTCTCCCCATCTT 20 20 50.0 50.0 58.1 58.0 0.0 0.0 0.099274 117809 118599 1642-1879 0.750000 75.2 ndhF-rpl32_p3 ndhF-rpl32 3 CTTGAGGTCGTGTGAACCAA TTCGAAACCTCTCCCCATCT 20 20 50.0 50.0 58.1 58.0 0.0 0.0 0.099274 117809 118599 1643-1880 0.750000 75.2 ndhF-rpl32_p4 ndhF-rpl32 4 GGCACCACCAAATACCAGAA GTTCGAAACCTCTCCCCATC 20 20 50.0 55.0 58.1 58.0 0.0 0.0 0.107717 117809 118599 1844-2081 0.666667 71.5 ndhF-rpl32_p5 ndhF-rpl32 5 GGCACCACCAAATACCAGAA TCGAAACCTCTCCCCATCTT 20 20 50.0 50.0 58.1 58.0 0.0 0.0 0.129507 117809 118599 1842-2079 0.666667 71.3 rpl32-trnL-UAG_p1 rpl32-trnL-UAG 1 TGCAAATTAAACCGACCCCA TCCTAAGAGCAGCGTGTCTA 20 20 45.0 50.0 58.0 57.9 0.0 0.0 0.127479 118759 119654 1397-1621 0.833333 79.1 rpl32-trnL-UAG_p2 rpl32-trnL-UAG 2 TGCAAATTAAACCGACCCCA AGCAAAGCCCTGGGTAAAAA 20 20 45.0 45.0 58.0 57.9 0.0 15.6 0.098806 118759 119654 1861-2087 0.833333 78.7 rpl32-trnL-UAG_p3 rpl32-trnL-UAG 3 TGCAAATTAAACCGACCCCA AACCACTCGGATTGAAGAGC 20 20 45.0 50.0 58.0 57.9 0.0 0.0 0.103806 118759 119654 1929-2155 0.833333 78.6 rpl32-trnL-UAG_p4 rpl32-trnL-UAG 4 TGCAAATTAAACCGACCCCA TTCCCCAACGAAAAACGACT 20 20 45.0 45.0 58.0 58.0 0.0 0.0 0.044453 118759 119654 2083-2309 0.750000 75.3 rpl32-trnL-UAG_p5 rpl32-trnL-UAG 5 CTCCCCCTCCTTAGCTTTCT TTCCCCAACGAAAAACGACT 20 20 55.0 45.0 58.1 58.0 0.0 0.0 0.154829 118759 119654 1930-1930 0.083333 42.1 ccsA_p1 ccsA 1 GATGGGGAGAGGTTTCGAAC ATGAGTGGCTTTGTTGCTGA 20 20 55.0 45.0 58.0 58.0 0.0 0.0 0.040115 119817 120785 2270-2323 0.750000 72.5 ccsA_p2 ccsA 2 AAGATGGGGAGAGGTTTCGA ATGAGTGGCTTTGTTGCTGA 20 20 50.0 45.0 58.0 58.0 0.0 0.0 0.061905 119817 120785 2272-2325 0.750000 72.3 ccsA_p3 ccsA 3 AGATGGGGAGAGGTTTCGAA ATGAGTGGCTTTGTTGCTGA 20 20 50.0 45.0 58.0 58.0 0.0 0.0 0.061905 119817 120785 2271-2324 0.750000 72.3 ccsA_p4 ccsA 4 GATGGGGAGAGGTTTCGAAC TATCTTGACGAAATGGGCGG 20 20 55.0 50.0 58.0 58.1 0.0 0.0 0.077484 119817 120785 2363-2416 0.666667 68.4 ccsA_p5 ccsA 5 AGATGGGGAGAGGTTTCGAA TATCTTGACGAAATGGGCGG 20 20 50.0 50.0 58.0 58.1 0.0 0.0 0.099274 119817 120785 2364-2417 0.666667 68.2 ccsA-ndhD_p1 ccsA-ndhD 1 ATTCGGCAATTGTAGCGTCT ATGAGTGGCTTTGTTGCTGA 20 20 45.0 45.0 58.0 58.0 7.4 0.0 0.038702 120786 121031 692-695 0.833333 74.9 ccsA-ndhD_p2 ccsA-ndhD 2 CTAACGAAGCTTGGGGATCC ATGAGTGGCTTTGTTGCTGA 20 20 55.0 45.0 58.0 58.0 13.4 0.0 0.059600 120786 121031 812-815 0.833333 74.4 ccsA-ndhD_p3 ccsA-ndhD 3 AGTCGTTTTTCGTTGGGGAA ATGAGTGGCTTTGTTGCTGA 20 20 45.0 45.0 58.0 58.0 0.0 0.0 0.055778 120786 121031 1001-1004 0.750000 70.8 ccsA-ndhD_p4 ccsA-ndhD 4 ATTCGGCAATTGTAGCGTCT TATCTTGACGAAATGGGCGG 20 20 45.0 50.0 58.0 58.1 7.4 0.0 0.076071 120786 121031 787-788 0.750000 70.3 ccsA-ndhD_p5 ccsA-ndhD 5 AGTCGTTTTTCGTTGGGGAA TATCTTGACGAAATGGGCGG 20 20 45.0 50.0 58.0 58.1 0.0 0.0 0.093147 120786 121031 1096-1097 0.666667 66.5 ndhD_p1 ndhD 1 ATTCGGCAATTGTAGCGTCT CAAATTGCTTCGGCTCCAAG 20 20 45.0 50.0 58.0 58.0 7.4 0.0 0.037478 121032 122534 2127-2135 0.833333 74.6 ndhD_p2 ndhD 2 ATTCGGCAATTGTAGCGTCT AAGATGTGAATCCGCCTGTC 20 20 45.0 50.0 58.0 58.0 7.4 0.0 0.054014 121032 122534 2083-2091 0.833333 74.5 ndhD_p3 ndhD 3 ATTCGGCAATTGTAGCGTCT AACAGAAGACTGCGTTGGTT 20 20 45.0 45.0 58.0 58.0 7.4 0.0 0.062562 121032 122534 2107-2115 0.833333 74.5 ndhD_p4 ndhD 4 CTAACGAAGCTTGGGGATCC CAAATTGCTTCGGCTCCAAG 20 20 55.0 50.0 58.0 58.0 13.4 0.0 0.058375 121032 122534 2247-2255 0.833333 74.4 ndhD_p5 ndhD 5 AGTCGTTTTTCGTTGGGGAA CAAATTGCTTCGGCTCCAAG 20 20 45.0 50.0 58.0 58.0 0.0 0.0 0.054553 121032 122534 2437-2444 0.750000 70.7 ndhG_p1 ndhG 1 CTAATACATCGGTGGGGCAG TCGCACAATTTCGAATTCGC 20 20 55.0 45.0 57.8 58.1 0.0 22.9 0.292731 123571 124101 1796-1859 0.833333 75.3 ndhG_p2 ndhG 2 TCTAATACATCGGTGGGGCA TCGCACAATTTCGAATTCGC 20 20 50.0 45.0 58.2 58.1 0.0 22.9 0.326882 123571 124101 1797-1860 0.833333 75.0 ndhG_p3 ndhG 3 TGAAACAATAGCCAGCCCAA TCGCACAATTTCGAATTCGC 20 20 45.0 45.0 57.7 58.1 0.0 22.9 0.423855 123571 124101 1411-1474 0.833333 75.0 ndhG_p4 ndhG 4 CTAATACATCGGTGGGGCAG GCACAATTTCGAATTCGCCT 20 20 55.0 45.0 57.8 57.7 0.0 22.9 0.432404 123571 124101 1794-1857 0.833333 74.2 ndhG_p5 ndhG 5 TCTAATACATCGGTGGGGCA GCACAATTTCGAATTCGCCT 20 20 50.0 45.0 58.2 57.7 0.0 22.9 0.466556 123571 124101 1795-1858 0.833333 73.9 ndhG-ndhI_p1 ndhG-ndhI 1 ACCTCCTAAGATCAGACCCG GTTTCGCGATTACCCTGTCT 20 20 55.0 50.0 57.9 58.0 0.0 10.9 0.080699 124102 124637 990-1053 0.833333 79.4 ndhG-ndhI_p2 ndhG-ndhI 2 CGCGGCAGCTACAAAATAAG GTTTCGCGATTACCCTGTCT 20 20 50.0 50.0 57.9 58.0 7.4 10.9 0.097122 124102 124637 1104-1167 0.833333 78.8 ndhG-ndhI_p3 ndhG-ndhI 3 ACAGTCCAAAGGCGAGAATC GTTTCGCGATTACCCTGTCT 20 20 50.0 50.0 57.9 58.0 0.0 10.9 0.106575 124102 124637 1205-1268 0.833333 78.2 ndhG-ndhI_p4 ndhG-ndhI 4 TCCAAAGGCGAGAATCCTTG GTTTCGCGATTACCCTGTCT 20 20 50.0 50.0 57.9 58.0 0.0 10.9 0.119831 124102 124637 1201-1264 0.833333 78.1 ndhG-ndhI_p5 ndhG-ndhI 5 GTCCAAAGGCGAGAATCCTT GTTTCGCGATTACCCTGTCT 20 20 50.0 50.0 57.9 58.0 0.0 10.9 0.121313 124102 124637 1202-1265 0.833333 78.1 ndhI_p1 ndhI 1 ACCTCCTAAGATCAGACCCG GCTTTTGGGGGTGGAATTTG 20 20 55.0 50.0 57.9 57.8 0.0 0.0 0.258207 124638 125132 1644-1707 0.833333 75.9 ndhI_p2 ndhI 2 CGCGGCAGCTACAAAATAAG GCTTTTGGGGGTGGAATTTG 20 20 50.0 50.0 57.9 57.8 7.4 0.0 0.274630 124638 125132 1758-1821 0.833333 75.5 ndhI_p3 ndhI 3 ACCTCCTAAGATCAGACCCG AATATGGCTTTTGGGGGTGG 20 20 55.0 50.0 57.9 58.1 0.0 0.0 0.196518 124638 125132 1650-1706 0.750000 72.7 ndhI_p4 ndhI 4 CGCGGCAGCTACAAAATAAG AATATGGCTTTTGGGGGTGG 20 20 50.0 50.0 57.9 58.1 7.4 0.0 0.212941 124638 125132 1764-1820 0.750000 72.3 ndhI_p5 ndhI 5 ATCAGACCCGATCCCAGAAA AATATGGCTTTTGGGGGTGG 20 20 50.0 50.0 58.1 58.1 0.0 0.0 0.242214 124638 125132 1640-1696 0.750000 72.3 ndhA_p1 ndhA 1 AGACAGGGTAATCGCGAAAC TCCAACCTTTGAATTGGCGA 20 20 50.0 45.0 58.0 58.0 15.2 0.0 0.017677 125220 127373 2558-2587 0.833333 74.8 ndhA_p2 ndhA 2 AGACAGGGTAATCGCGAAAC GTGAGAGTTGAAGCCCCAAA 20 20 50.0 50.0 58.0 58.0 15.2 0.0 0.024714 125220 127373 2524-2553 0.833333 74.8 ndhA_p3 ndhA 3 AGACAGGGTAATCGCGAAAC TACAACAGGCTCTGGAAGGA 20 20 50.0 50.0 58.0 58.0 15.2 7.1 0.030146 125220 127373 2682-2711 0.833333 74.7 ndhA_p4 ndhA 4 AGACAGGGTAATCGCGAAAC GTTTATCGGGCCCAATGCTA 20 20 50.0 50.0 58.0 58.0 15.2 24.9 0.030311 125220 127373 2853-2882 0.833333 74.6 ndhA_p5 ndhA 5 AGACAGGGTAATCGCGAAAC TTTATCGGGCCCAATGCTAC 20 20 50.0 50.0 58.0 58.0 15.2 24.9 0.030311 125220 127373 2852-2881 0.833333 74.6 ndhH_p1 ndhH 1 ATAACCGACCATCTCCGCTA CAGTTGGGTATTCGAGAGGC 20 20 50.0 55.0 58.0 58.1 0.0 0.0 0.067554 127376 128572 1610-1626 0.833333 74.3 ndhH_p2 ndhH 2 ATAACCGACCATCTCCGCTA AAGGGGGTCGGTTGAATTTC 20 20 50.0 50.0 58.0 58.1 0.0 0.0 0.089639 127376 128572 1797-1813 0.833333 74.2 ndhH_p3 ndhH 3 ATAACCGACCATCTCCGCTA GAAGGGGGTCGGTTGAATTT 20 20 50.0 50.0 58.0 58.1 0.0 0.0 0.089639 127376 128572 1798-1814 0.833333 74.2 ndhH_p4 ndhH 4 GAAGAATTCCTAAGGGCCCG CAGTTGGGTATTCGAGAGGC 20 20 55.0 55.0 58.0 58.1 18.4 0.0 0.089971 127376 128572 1538-1554 0.833333 74.2 ndhH_p5 ndhH 5 AAATAACCGACCATCTCCGC CAGTTGGGTATTCGAGAGGC 20 20 50.0 55.0 58.1 58.1 0.0 0.0 0.109210 127376 128572 1612-1628 0.833333 73.9 rps15-ycf1_p1 rps15-ycf1 1 ACGCGTTACATAGGGCAAAT TCTGCATCCGCGATTGTAAA 20 20 45.0 45.0 58.0 58.0 5.6 8.2 0.049818 128928 129306 1508-1524 0.833333 75.2 rps15-ycf1_p2 rps15-ycf1 2 ACGCGTTACATAGGGCAAAT TTCTGCATCCGCGATTGTAA 20 20 45.0 45.0 58.0 58.0 5.6 8.2 0.049818 128928 129306 1509-1525 0.833333 75.2 rps15-ycf1_p3 rps15-ycf1 3 ACGCGTTACATAGGGCAAAT TTTCTGCATCCGCGATTGTA 20 20 45.0 45.0 58.0 58.0 5.6 8.2 0.049818 128928 129306 1510-1526 0.833333 75.1 rps15-ycf1_p4 rps15-ycf1 4 AACACCATGCATTGATGGGT TCTGCATCCGCGATTGTAAA 20 20 45.0 45.0 58.1 58.0 8.9 8.2 0.075761 128928 129306 1376-1392 0.833333 75.0 rps15-ycf1_p5 rps15-ycf1 5 ACGCGTTACATAGGGCAAAT TTGGACTGAGAACAACTGCC 20 20 45.0 50.0 58.0 58.0 5.6 0.0 0.065362 128928 129306 1173-1189 0.583333 64.8 ycf1_p1 ycf1 1 ATTAGTTCCCGCCGAAAGTC TAAGTGGGCCCTATCGCTTA 20 20 50.0 50.0 58.0 57.9 0.0 25.7 0.111046 132991 133110 910-1165 0.833333 82.2 ycf1_p2 ycf1 2 ATTAGTTCCCGCCGAAAGTC TCACCTTCTAACGGGTCGAT 20 20 50.0 50.0 58.0 58.2 0.0 0.0 0.176579 132991 133110 872-1127 0.833333 81.6 ycf1_p3 ycf1 3 TTTTCGTGCCTATCGCTCAA TAAGTGGGCCCTATCGCTTA 20 20 45.0 50.0 57.9 57.9 0.0 25.7 0.178599 132991 133110 1123-1378 0.750000 77.4 ycf1_p4 ycf1 4 TTTTTCGTGCCTATCGCTCA TAAGTGGGCCCTATCGCTTA 20 20 45.0 50.0 57.9 57.9 0.0 25.7 0.178599 132991 133110 1124-1379 0.750000 77.4 ycf1_p5 ycf1 5 TTCCCACCATACCCTCTTGT TAAGTGGGCCCTATCGCTTA 20 20 50.0 50.0 57.9 57.9 0.0 25.7 0.144845 132991 133110 861-1116 0.250000 49.3