primer_id label_name rank fwd_seq rev_seq fwd_len rev_len fwd_gc rev_gc fwd_tm rev_tm fwd_self_any_th rev_self_any_th primer3_penalty target_start target_end amplicon_size cross_species_success_rate primer_score trnK-UUU-trnQ-UUG_p1 trnK-UUU-trnQ-UUG 1 CCGATGGTATGGACGAATCC TTTGGTCCCGGTGATCAAAG 20 20 55.0 50.0 57.9 58.1 0.0 20.7 0.175999 4258 6255 2091-2162 0.833333 77.3 trnK-UUU-trnQ-UUG_p2 trnK-UUU-trnQ-UUG 2 CGATGGTATGGACGAATCCC TTTGGTCCCGGTGATCAAAG 20 20 55.0 50.0 57.9 58.1 0.0 20.7 0.175999 4258 6255 2090-2161 0.833333 77.3 trnK-UUU-trnQ-UUG_p3 trnK-UUU-trnQ-UUG 3 GATGGTATGGACGAATCCCG TTTGGTCCCGGTGATCAAAG 20 20 55.0 50.0 57.9 58.1 0.0 20.7 0.175999 4258 6255 2089-2160 0.833333 77.3 trnK-UUU-trnQ-UUG_p4 trnK-UUU-trnQ-UUG 4 CGATGGTATGGACGAATCCC CCGGTGATCAAAGGTTCGAA 20 20 55.0 50.0 57.9 58.2 0.0 0.0 0.276952 4258 6255 2083-2154 0.833333 76.5 trnK-UUU-trnQ-UUG_p5 trnK-UUU-trnQ-UUG 5 GATGGTATGGACGAATCCCG CCGGTGATCAAAGGTTCGAA 20 20 55.0 50.0 57.9 58.2 0.0 0.0 0.276952 4258 6255 2082-2153 0.833333 76.5 petN-psbM_p1 petN-psbM 1 GGCGGCATTAATGACAGTCT ATTGCTACTGCGCTGTTCAT 20 20 50.0 45.0 58.3 58.3 21.1 25.3 0.588820 26660 27431 915-920 1.000000 77.2 petN-psbM_p2 petN-psbM 2 GGCGGCATTAATGACAGTCT TATTGCTACTGCGCTGTTCA 20 20 50.0 45.0 58.3 57.6 21.1 25.3 0.710025 26660 27431 916-921 1.000000 76.2 petN-psbM_p3 petN-psbM 3 GGCGGCATTAATGACAGTCT TTGCTACTGCGCTGTTCATT 20 20 50.0 45.0 58.3 58.5 21.1 25.3 0.808912 26660 27431 914-919 1.000000 75.4 petN-psbM_p4 petN-psbM 4 GGCGGCATTAATGACAGTCT TGCTTTTATTGCTACTGCGC 20 20 50.0 45.0 58.3 57.5 21.1 0.0 0.874347 26660 27431 922-927 1.000000 74.9 petN-psbM_p5 petN-psbM 5 GGCGGCATTAATGACAGTCT GCTACTGCGCTGTTCATTCT 20 20 50.0 50.0 58.3 58.6 21.1 25.3 0.967837 26660 27431 912-917 1.000000 74.2 trnE-UUC-trnT-GGU_p1 trnE-UUC-trnT-GGU 1 CGTAGTATCCTACCCCCAGG GAACCGATGACTTACGCCTT 20 20 60.0 50.0 58.1 58.0 0.0 0.0 0.085360 29300 30257 953-1096 1.000000 85.1 trnE-UUC-trnT-GGU_p2 trnE-UUC-trnT-GGU 2 CGTAGTATCCTACCCCCAGG CCATGGCGTTACTCTACCAC 20 20 60.0 55.0 58.1 58.1 0.0 0.0 0.143457 29300 30257 932-1075 1.000000 84.6 trnE-UUC-trnT-GGU_p3 trnE-UUC-trnT-GGU 3 AGAGATGTCCTGAACCGCTA GAACCGATGACTTACGCCTT 20 20 50.0 50.0 57.9 58.0 0.0 0.0 0.151367 29300 30257 902-1045 1.000000 84.6 trnE-UUC-trnT-GGU_p4 trnE-UUC-trnT-GGU 4 AGATGTCCTGAACCGCTAGA GAACCGATGACTTACGCCTT 20 20 50.0 50.0 57.9 58.0 0.0 0.0 0.151367 29300 30257 900-1043 1.000000 84.6 trnE-UUC-trnT-GGU_p5 trnE-UUC-trnT-GGU 5 CGTAGTATCCTACCCCCAGG TGGCGTTACTCTACCACTGA 20 20 60.0 50.0 58.1 58.1 0.0 0.0 0.165612 29300 30257 929-1072 1.000000 84.4 psbZ-trnG-GCC_p1 psbZ-trnG-GCC 1 CTTCTCCTGATGGTTGGGTG CGTCTTCTCCTTGGCAAAGA 20 20 55.0 50.0 57.9 57.8 0.0 1.1 0.289634 35165 35856 846-867 1.000000 83.5 psbZ-trnG-GCC_p2 psbZ-trnG-GCC 2 CCCGTTGTTTTTGCTTCTCC CGTCTTCTCCTTGGCAAAGA 20 20 50.0 50.0 57.9 57.8 0.0 1.1 0.304034 35165 35856 859-880 1.000000 83.3 psbZ-trnG-GCC_p3 psbZ-trnG-GCC 3 TTGCTTCTCCTGATGGTTGG CGTCTTCTCCTTGGCAAAGA 20 20 50.0 50.0 57.8 57.8 0.0 1.1 0.374855 35165 35856 849-870 1.000000 82.8 psbZ-trnG-GCC_p4 psbZ-trnG-GCC 4 TTCTCCTGATGGTTGGGTGA CGTCTTCTCCTTGGCAAAGA 20 20 50.0 50.0 58.3 57.8 0.0 1.1 0.428804 35165 35856 845-866 1.000000 82.3 psbZ-trnG-GCC_p5 psbZ-trnG-GCC 5 CTTCTCCTGATGGTTGGGTG TAAATACATTGCCTGGGCGG 20 20 55.0 50.0 57.9 58.3 0.0 7.1 0.433447 35165 35856 885-906 1.000000 82.2 psaA-ycf3_p1 psaA-ycf3 1 GCCCATTCCTCGAAAGAAGT ATCAAGCCGCTGAGTATTGG 20 20 50.0 50.0 57.9 58.0 4.1 0.0 0.156301 41223 42058 1004-1039 1.000000 81.5 psaA-ycf3_p2 psaA-ycf3 2 GCCCATTCCTCGAAAGAAGT GGAAACAGGCTATAGCGCTT 20 20 50.0 50.0 57.9 58.0 4.1 18.7 0.160416 41223 42058 986-1021 1.000000 81.5 psaA-ycf3_p3 psaA-ycf3 3 AGAAATGACCCGGTTTAGCC ATCAAGCCGCTGAGTATTGG 20 20 50.0 50.0 57.9 58.0 0.0 0.0 0.165236 41223 42058 1021-1056 1.000000 81.4 psaA-ycf3_p4 psaA-ycf3 4 AGAAATGACCCGGTTTAGCC GGAAACAGGCTATAGCGCTT 20 20 50.0 50.0 57.9 58.0 0.0 18.7 0.169350 41223 42058 1003-1038 1.000000 81.4 psaA-ycf3_p5 psaA-ycf3 5 GCCCATTCCTCGAAAGAAGT CAGAGGCTTGGTTCGATCAA 20 20 50.0 50.0 57.9 57.9 4.1 0.0 0.214484 41223 42058 1019-1054 1.000000 81.0 rps4-trnT-UGU_p1 rps4-trnT-UGU 1 GATTGGTTTTTGCCGGCTTT CTCAGAGGTTAGAGCATCGC 20 20 45.0 55.0 58.1 57.9 29.7 0.0 0.255103 45784 46341 717-719 1.000000 78.6 rps4-trnT-UGU_p2 rps4-trnT-UGU 2 GATTGGTTTTTGCCGGCTTT ATGGTCATCGGTTCGATTCC 20 20 45.0 50.0 58.1 57.8 29.7 0.0 0.362857 45784 46341 685-687 1.000000 77.8 rps4-trnT-UGU_p3 rps4-trnT-UGU 3 GATTGGTTTTTGCCGGCTTT CAGAGGTTAGAGCATCGCAT 20 20 45.0 50.0 58.1 57.5 29.7 0.0 0.645199 45784 46341 715-717 1.000000 75.5 rps4-trnT-UGU_p4 rps4-trnT-UGU 4 GATTGGTTTTTGCCGGCTTT TCAGAGGTTAGAGCATCGCA 20 20 45.0 50.0 58.1 58.5 29.7 0.0 0.648034 45784 46341 716-718 1.000000 75.5 rps4-trnT-UGU_p5 rps4-trnT-UGU 5 TTGGTTTTTGCCGGCTTTAG CTCAGAGGTTAGAGCATCGC 20 20 45.0 55.0 57.5 57.9 29.7 0.0 0.650390 45784 46341 715-717 1.000000 75.5 trnT-UGU-trnL-UAA_p1 trnT-UGU-trnL-UAA 1 GCGATGCTCTAACCTCTGAG CCGTAGCGTCTACCGATTTC 20 20 55.0 55.0 57.9 58.2 0.0 10.2 0.381189 46415 47253 872-900 1.000000 80.0 trnT-UGU-trnL-UAA_p2 trnT-UGU-trnL-UAA 2 GGAATCGAACCGATGACCAT CCGTAGCGTCTACCGATTTC 20 20 50.0 55.0 57.8 58.2 15.5 10.2 0.488942 46415 47253 904-932 1.000000 79.1 trnT-UGU-trnL-UAA_p3 trnT-UGU-trnL-UAA 3 AAGAAATAGGGAAAGCCGGC CCGTAGCGTCTACCGATTTC 20 20 50.0 55.0 58.2 58.2 21.9 10.2 0.484481 46415 47253 928-956 1.000000 79.0 trnT-UGU-trnL-UAA_p4 trnT-UGU-trnL-UAA 4 GCGATGCTCTAACCTCTGAG CGTCTACCGATTTCGCCATA 20 20 55.0 50.0 57.9 57.6 0.0 0.0 0.543526 46415 47253 866-894 1.000000 78.8 trnT-UGU-trnL-UAA_p5 trnT-UGU-trnL-UAA 5 AAGAAATAGGGAAAGCCGGC CGTCTACCGATTTCGCCATA 20 20 50.0 50.0 58.2 57.6 21.9 0.0 0.646818 46415 47253 922-950 1.000000 77.7 trnF-GAA-ndhJ_p1 trnF-GAA-ndhJ 1 CCTCGTGTCACCAGTTCAAA ATCCACGCCAGAAACGTATC 20 20 50.0 50.0 58.1 58.1 0.0 0.0 0.115963 48307 49022 851-855 1.000000 81.1 trnF-GAA-ndhJ_p2 trnF-GAA-ndhJ 2 CCTCGTGTCACCAGTTCAAA CCACGCCAGAAACGTATCTT 20 20 50.0 50.0 58.1 58.3 0.0 0.0 0.329884 48307 49022 849-853 1.000000 79.4 trnF-GAA-ndhJ_p3 trnF-GAA-ndhJ 3 CCTCGTGTCACCAGTTCAAA GAGAATCATCCACGCCAGAA 20 20 50.0 50.0 58.1 57.7 0.0 0.0 0.367821 48307 49022 858-862 1.000000 79.1 trnF-GAA-ndhJ_p4 trnF-GAA-ndhJ 4 CCTCGTGTCACCAGTTCAAA CATCCACGCCAGAAACGTAT 20 20 50.0 50.0 58.1 58.3 0.0 0.0 0.399908 48307 49022 852-856 1.000000 78.9 trnF-GAA-ndhJ_p5 trnF-GAA-ndhJ 5 CCTCGTGTCACCAGTTCAAA ATGCCCGAAAGTTGGATAGG 20 20 50.0 50.0 58.1 57.7 0.0 0.0 0.400307 48307 49022 828-832 1.000000 78.9 ndhC-trnV-UAC_p1 ndhC-trnV-UAC 1 GGGGCCAAAACTCCAGAAAT AGAAGGTCTACGGTTCGAGT 20 20 50.0 50.0 58.4 57.8 4.4 0.0 0.552774 50718 51748 1162-1182 1.000000 77.8 ndhC-trnV-UAC_p2 ndhC-trnV-UAC 2 TTTTCGAATCGGGGCCAAAA AGAAGGTCTACGGTTCGAGT 20 20 45.0 50.0 58.7 57.8 4.4 0.0 0.868027 50718 51748 1172-1192 1.000000 75.2 ndhC-trnV-UAC_p3 ndhC-trnV-UAC 3 GGGGCCAAAACTCCAGAAAT GAAGGTCTACGGTTCGAGTC 20 20 50.0 55.0 58.4 57.5 4.4 0.0 0.896546 50718 51748 1161-1181 1.000000 75.0 ndhC-trnV-UAC_p4 ndhC-trnV-UAC 4 GGGGCCAAAACTCCAGAAAT GTTCGAGTCCGTATAGCCCT 20 20 50.0 55.0 58.4 58.7 4.4 0.0 1.038840 50718 51748 1150-1170 1.000000 73.9 ndhC-trnV-UAC_p5 ndhC-trnV-UAC 5 GGGGCCAAAACTCCAGAAAT AAGGTCTACGGTTCGAGTCC 20 20 50.0 55.0 58.4 58.8 4.4 0.0 1.183316 50718 51748 1160-1180 1.000000 72.7 accD_p1 accD 1 TCAGAGGAAAGGGGGAAACT TAAATGGACTTGCCCCATCG 20 20 50.0 50.0 57.9 57.9 0.0 0.0 0.185192 57852 59138 2025-2129 1.000000 81.2 accD_p2 accD 2 TCAGAGGAAAGGGGGAAACT ACGATTGTGTATCTTGGCCC 20 20 50.0 50.0 57.9 58.0 0.0 0.0 0.172245 57852 59138 2334-2438 1.000000 81.0 accD_p3 accD 3 TCAGAGGAAAGGGGGAAACT CGGAAGTACTAGGGCCACTA 20 20 50.0 55.0 57.9 57.9 0.0 6.2 0.196828 57852 59138 2238-2342 1.000000 80.9 accD_p4 accD 4 ATTGTTGTGTTGGGTCCACA TAAATGGACTTGCCCCATCG 20 20 45.0 50.0 57.8 57.9 0.0 0.0 0.202837 57852 59138 2244-2348 1.000000 80.8 accD_p5 accD 5 ATTGTTGTGTTGGGTCCACA ACGATTGTGTATCTTGGCCC 20 20 45.0 50.0 57.8 58.0 0.0 0.0 0.189889 57852 59138 2553-2657 1.000000 80.6 trnP-UGG-psaJ_p1 trnP-UGG-psaJ 1 AAAACAAACGCGCTACCAAG CACTTAGTACCGGTGCTACG 20 20 45.0 55.0 57.9 57.8 5.7 29.3 0.298295 66954 67372 500-507 1.000000 80.8 trnP-UGG-psaJ_p2 trnP-UGG-psaJ 2 CAAAACAAACGCGCTACCAA CACTTAGTACCGGTGCTACG 20 20 45.0 55.0 58.2 57.8 5.7 29.3 0.355553 66954 67372 501-508 1.000000 80.3 trnP-UGG-psaJ_p3 trnP-UGG-psaJ 3 TTGTACCCAAAACAAACGCG CACTTAGTACCGGTGCTACG 20 20 45.0 55.0 57.8 57.8 3.5 29.3 0.374709 66954 67372 508-515 1.000000 80.1 trnP-UGG-psaJ_p4 trnP-UGG-psaJ 4 AAAACAAACGCGCTACCAAG AATGTCAACGCATCGGGAAA 20 20 45.0 45.0 57.9 58.5 5.7 0.0 0.584685 66954 67372 570-577 1.000000 78.1 trnP-UGG-psaJ_p5 trnP-UGG-psaJ 5 AAAACAAACGCGCTACCAAG ATGTCAACGCATCGGGAAAA 20 20 45.0 45.0 57.9 58.5 5.7 0.0 0.584685 66954 67372 569-576 1.000000 78.1 rpl33-rps18_p1 rpl33-rps18 1 CGACACAATACACCTAACCGA GGATTTACGAAAGAGCCGCT 21 20 47.6 50.0 57.8 58.3 0.0 0.0 1.567356 68213 68731 635-672 1.000000 70.0 rpl33-rps18_p2 rpl33-rps18 2 TCGACACAATACACCTAACCG GGATTTACGAAAGAGCCGCT 21 20 47.6 50.0 57.8 58.3 0.0 0.0 1.567356 68213 68731 636-673 1.000000 70.0 rpl33-rps18_p3 rpl33-rps18 3 CGACACAATACACCTAACCGA TGGATTTACGAAAGAGCCGC 21 20 47.6 50.0 57.8 58.6 0.0 0.0 1.854808 68213 68731 636-673 1.000000 67.7 rpl33-rps18_p4 rpl33-rps18 4 TCGACACAATACACCTAACCG TGGATTTACGAAAGAGCCGC 21 20 47.6 50.0 57.8 58.6 0.0 0.0 1.854808 68213 68731 637-674 1.000000 67.7 rpl33-rps18_p5 rpl33-rps18 5 CGACACAATACACCTAACCG GGATTTACGAAAGAGCCGCT 20 20 50.0 50.0 56.3 58.3 0.0 0.0 2.062211 68213 68731 635-672 1.000000 66.1 rps12-clpP_p1 rps12-clpP 1 TGCACCAACGGAAACCATAA ATGTCAGCCACAGAAGCAAA 20 20 45.0 45.0 58.0 58.0 0.0 0.0 0.031867 70523 70898 597-735 1.000000 91.1 rps12-clpP_p2 rps12-clpP 2 TTGCACCAACGGAAACCATA ATGTCAGCCACAGAAGCAAA 20 20 45.0 45.0 58.0 58.0 0.0 0.0 0.031867 70523 70898 598-736 1.000000 91.1 rps12-clpP_p3 rps12-clpP 3 TGCACCAACGGAAACCATAA TATACGGCTCCTAAGGGGTG 20 20 45.0 55.0 58.0 58.0 0.0 0.0 0.022710 70523 70898 1209-1209 0.166667 46.5 rps12-clpP_p4 rps12-clpP 4 TTGCACCAACGGAAACCATA TATACGGCTCCTAAGGGGTG 20 20 45.0 55.0 58.0 58.0 0.0 0.0 0.022710 70523 70898 1210-1210 0.166667 46.5 rps12-clpP_p5 rps12-clpP 5 GATTGGCTGTCTTGCGTTTC TATACGGCTCCTAAGGGGTG 20 20 50.0 55.0 58.0 58.0 0.0 0.0 0.036267 70523 70898 979-979 0.166667 46.4 trnN-GUU-rps15_p1 trnN-GUU-rps15 1 ACCCCTTTCGTGTCATTGAC CGACCACAACAACCGAATTG 20 20 50.0 50.0 58.1 58.0 9.9 0.0 0.138827 107390 107509 331-475 1.000000 87.8 trnN-GUU-rps15_p2 trnN-GUU-rps15 2 ACCCCCGTAACTTCTTCGTA CGACCACAACAACCGAATTG 20 20 50.0 50.0 58.1 58.0 0.0 0.0 0.107681 107390 107509 442-586 1.000000 87.0 trnN-GUU-rps15_p3 trnN-GUU-rps15 3 TCGTAACCCCCGTAACTTCT CGACCACAACAACCGAATTG 20 20 50.0 50.0 58.1 58.0 0.0 0.0 0.107681 107390 107509 447-591 1.000000 87.0 trnN-GUU-rps15_p4 trnN-GUU-rps15 4 GAGGTTTCCTTCGTAACCCC CGACCACAACAACCGAATTG 20 20 55.0 50.0 57.9 58.0 0.0 0.0 0.136043 107390 107509 457-601 1.000000 86.7 trnN-GUU-rps15_p5 trnN-GUU-rps15 5 CAATTCCCGTTCTCAACCCA CGACCACAACAACCGAATTG 20 20 50.0 50.0 58.1 58.0 0.0 0.0 0.126750 107390 107509 493-637 1.000000 86.5 ndhD-ccsA_p1 ndhD-ccsA 1 TATCAGGTGAGAGGGTCGAC GCAGTCTGGGCTAATGAGTC 20 20 55.0 55.0 57.9 58.1 7.1 1.1 0.107487 121441 121692 548-548 1.000000 82.5 ndhD-ccsA_p2 ndhD-ccsA 2 ACTATCAGGTGAGAGGGTCG GCAGTCTGGGCTAATGAGTC 20 20 55.0 55.0 57.9 58.1 6.6 1.1 0.113305 121441 121692 550-550 1.000000 82.4 ndhD-ccsA_p3 ndhD-ccsA 3 TATCAGGTGAGAGGGTCGAC TTTGCTACTTCGGGCCTTTT 20 20 55.0 45.0 57.9 58.0 7.1 0.8 0.064526 121441 121692 926-926 1.000000 81.6 ndhD-ccsA_p4 ndhD-ccsA 4 ACTATCAGGTGAGAGGGTCG TTTGCTACTTCGGGCCTTTT 20 20 55.0 45.0 57.9 58.0 6.6 0.8 0.070344 121441 121692 928-928 1.000000 81.6 ndhD-ccsA_p5 ndhD-ccsA 5 CGGCTTGTTTATCTCGACGA TTTGCTACTTCGGGCCTTTT 20 20 50.0 45.0 58.1 58.0 0.0 0.8 0.106150 121441 121692 1311-1311 1.000000 80.8 ccsA_p1 ccsA 1 TATCAGGTGAGAGGGTCGAC TGGAATTGGTAGACACGCTG 20 20 55.0 50.0 57.9 57.9 7.1 0.0 0.147538 121693 122655 1420-1428 1.000000 80.7 ccsA_p2 ccsA 2 TATCAGGTGAGAGGGTCGAC GTGGAATTGGTAGACACGCT 20 20 55.0 50.0 57.9 57.9 7.1 0.0 0.148994 121693 122655 1421-1429 1.000000 80.7 ccsA_p3 ccsA 3 ACTATCAGGTGAGAGGGTCG TGGAATTGGTAGACACGCTG 20 20 55.0 50.0 57.9 57.9 6.6 0.0 0.153356 121693 122655 1422-1430 1.000000 80.7 ccsA_p4 ccsA 4 ACTATCAGGTGAGAGGGTCG GTGGAATTGGTAGACACGCT 20 20 55.0 50.0 57.9 57.9 6.6 0.0 0.154812 121693 122655 1423-1431 1.000000 80.7 ccsA_p5 ccsA 5 TATCAGGTGAGAGGGTCGAC TAGACACGCTGCTCTTAGGA 20 20 55.0 50.0 57.9 57.9 7.1 0.0 0.178509 121693 122655 1411-1419 1.000000 80.5 trnL-UAG-ndhF_p1 trnL-UAG-ndhF 1 CAGCGTGTCTACCAATTCCA TTGGAAGTGGAATGAAGGGT 20 20 50.0 45.0 57.9 56.6 0.0 0.0 1.462823 122822 125471 2597-2732 1.000000 74.1 trnL-UAG-ndhF_p2 trnL-UAG-ndhF 2 AGCGTGTCTACCAATTCCAC TTGGAAGTGGAATGAAGGGT 20 20 50.0 45.0 57.9 56.6 0.0 0.0 1.464279 122822 125471 2596-2731 1.000000 74.1 trnL-UAG-ndhF_p3 trnL-UAG-ndhF 3 TCCTAAGAGCAGCGTGTCTA TTGGAAGTGGAATGAAGGGT 20 20 50.0 45.0 57.9 56.6 0.0 0.0 1.493794 122822 125471 2606-2741 1.000000 73.9 trnL-UAG-ndhF_p4 trnL-UAG-ndhF 4 AGAAACACAATGCCGCTACT TTGGAAGTGGAATGAAGGGT 20 20 45.0 45.0 57.8 56.6 0.0 0.0 1.554521 122822 125471 2657-2792 1.000000 73.4 trnL-UAG-ndhF_p5 trnL-UAG-ndhF 5 CTAAGAGCAGCGTGTCTACC TTGGAAGTGGAATGAAGGGT 20 20 55.0 45.0 57.8 56.6 0.0 0.0 1.565812 122822 125471 2604-2739 1.000000 73.3