primer_id label_name rank fwd_seq rev_seq fwd_len rev_len fwd_gc rev_gc fwd_tm rev_tm fwd_self_any_th rev_self_any_th primer3_penalty target_start target_end amplicon_size cross_species_success_rate primer_score trnH-GUG-psbA_p1 trnH-GUG-psbA 1 AATCCACTTGGCTACATCCG GCGCTAACCTTGGTATGGAA 20 20 50.0 50.0 57.7 58.0 0.0 0.0 0.364744 75 315 314-390 1.000000 89.1 trnH-GUG-psbA_p2 trnH-GUG-psbA 2 AATCCACTTGGCTACATCCG CCTCTAGACCTAGCTGCTGT 20 20 50.0 55.0 57.7 57.9 0.0 13.4 0.397962 75 315 264-340 1.000000 88.8 trnH-GUG-psbA_p3 trnH-GUG-psbA 3 AATCCACTTGGCTACATCCG TTCCCTCTAGACCTAGCTGC 20 20 50.0 55.0 57.7 57.9 0.0 0.0 0.406792 75 315 267-343 1.000000 88.7 trnH-GUG-psbA_p4 trnH-GUG-psbA 4 TTGCCTTAATCCACTTGGCT GCGCTAACCTTGGTATGGAA 20 20 45.0 50.0 57.4 58.0 0.0 0.0 0.635755 75 315 321-397 1.000000 86.9 trnH-GUG-psbA_p5 trnH-GUG-psbA 5 TTGCCTTAATCCACTTGGCT CCTCTAGACCTAGCTGCTGT 20 20 45.0 55.0 57.4 57.9 0.0 13.4 0.668973 75 315 271-347 1.000000 86.6 rps16-trnQ-UUG_p1 rps16-trnQ-UUG 1 AAGTCGCACGTTGCTTTCTA GAGGTTCGAATCCTTCCGTC 20 20 45.0 55.0 58.1 58.1 8.1 16.9 0.215425 6532 7749 1078-1291 1.000000 90.3 rps16-trnQ-UUG_p2 rps16-trnQ-UUG 2 AAGTCGCACGTTGCTTTCTA TAAGGCATCGGGTTTTGGTC 20 20 45.0 50.0 58.1 58.2 8.1 0.0 0.310345 6532 7749 1108-1321 1.000000 89.5 rps16-trnQ-UUG_p3 rps16-trnQ-UUG 3 GGATCGTGTCCTTCAAGTCG GAGGTTCGAATCCTTCCGTC 20 20 55.0 55.0 58.4 58.1 2.9 16.9 0.445953 6532 7749 1092-1305 1.000000 88.4 rps16-trnQ-UUG_p4 rps16-trnQ-UUG 4 GGATCGTGTCCTTCAAGTCG TAAGGCATCGGGTTTTGGTC 20 20 55.0 50.0 58.4 58.2 2.9 0.0 0.540873 6532 7749 1122-1335 1.000000 87.7 rps16-trnQ-UUG_p5 rps16-trnQ-UUG 5 AAGTCGCACGTTGCTTTCTA GTAAGGCATCGGGTTTTGGT 20 20 45.0 50.0 58.1 58.5 8.1 0.0 0.597945 6532 7749 1109-1322 1.000000 87.2 psbI-trnS-GCU_p1 psbI-trnS-GCU 1 ATGATCCGGGTCGTAATCCT TGGACTAAAGCGTCGGATTG 20 20 50.0 50.0 58.0 58.0 8.0 0.0 0.015705 8890 9033 245-279 1.000000 89.5 psbI-trnS-GCU_p2 psbI-trnS-GCU 2 ATGATCCGGGTCGTAATCCT GTGGACTAAAGCGTCGGATT 20 20 50.0 50.0 58.0 58.0 8.0 0.0 0.017093 8890 9033 246-280 1.000000 89.4 psbI-trnS-GCU_p3 psbI-trnS-GCU 3 ATGATCCGGGTCGTAATCCT GACTAAAGCGTCGGATTGCT 20 20 50.0 50.0 58.0 58.4 8.0 2.3 0.369545 8890 9033 243-277 1.000000 86.7 psbI-trnS-GCU_p4 psbI-trnS-GCU 4 ATGATCCGGGTCGTAATCCT CTGAGTGGACTAAAGCGTCG 20 20 50.0 55.0 58.0 58.4 8.0 0.0 0.392262 8890 9033 250-284 1.000000 86.3 psbI-trnS-GCU_p5 psbI-trnS-GCU 5 ATGATCCGGGTCGTAATCCT ATGGCTGAGTGGACTAAAGC 20 20 50.0 50.0 58.0 57.6 8.0 5.7 0.421071 8890 9033 254-288 1.000000 85.9 trnS-GCU-trnG-GCC_p1 trnS-GCU-trnG-GCC 1 CAATCCGACGCTTTAGTCCA TAATCAAACCGAGGGATCCC 20 20 50.0 50.0 58.0 56.7 0.0 24.6 1.320552 9122 10061 905-1220 1.000000 81.4 trnS-GCU-trnG-GCC_p2 trnS-GCU-trnG-GCC 2 AATCCGACGCTTTAGTCCAC TAATCAAACCGAGGGATCCC 20 20 50.0 50.0 58.0 56.7 0.0 24.6 1.321940 9122 10061 904-1219 1.000000 81.4 trnS-GCU-trnG-GCC_p3 trnS-GCU-trnG-GCC 3 ACGGAAAGAGAGGGATTCGA TAATCAAACCGAGGGATCCC 20 20 50.0 50.0 58.2 56.7 0.0 24.6 1.467317 9122 10061 959-1274 1.000000 80.3 trnS-GCU-trnG-GCC_p4 trnS-GCU-trnG-GCC 4 CAATCCGACGCTTTAGTCCA TTAATCAAACCGAGGGATCCC 20 21 50.0 47.6 58.0 57.4 0.0 24.6 1.575494 9122 10061 906-1221 1.000000 79.4 trnS-GCU-trnG-GCC_p5 trnS-GCU-trnG-GCC 5 AATCCGACGCTTTAGTCCAC TTAATCAAACCGAGGGATCCC 20 21 50.0 47.6 58.0 57.4 0.0 24.6 1.576882 9122 10061 905-1220 1.000000 79.4 trnR-UCU-atpA_p1 trnR-UCU-atpA 1 ATGGAAATGAAAGGCGTCCA TCAGGAACAGATGGAACGTT 20 20 45.0 45.0 57.8 56.8 0.0 0.0 1.435965 11240 11582 433-483 1.000000 77.9 trnR-UCU-atpA_p2 trnR-UCU-atpA 2 ATGGAAATGAAAGGCGTCCA TTCAGGAACAGATGGAACGT 20 20 45.0 45.0 57.8 56.8 0.0 0.0 1.435965 11240 11582 434-484 1.000000 77.9 trnR-UCU-atpA_p3 trnR-UCU-atpA 3 TGGAAATGAAAGGCGTCCAT TCAGGAACAGATGGAACGTT 20 20 45.0 45.0 57.8 56.8 0.0 0.0 1.435965 11240 11582 432-482 1.000000 77.9 trnR-UCU-atpA_p4 trnR-UCU-atpA 4 TGGAAATGAAAGGCGTCCAT TTCAGGAACAGATGGAACGT 20 20 45.0 45.0 57.8 56.8 0.0 0.0 1.435965 11240 11582 433-483 1.000000 77.9 trnR-UCU-atpA_p5 trnR-UCU-atpA 5 TGGAAATGAAAGGCGTCCAT TCAGGAACAGATGGAACGTTT 20 21 45.0 42.9 57.8 57.5 0.0 0.5 1.699839 11240 11582 432-482 1.000000 75.8 rps2-rpoC2_p1 rps2-rpoC2 1 GGTGCCATTCTAGGATTCCA ACATCAGAACAATCATTTCTGGG 20 23 50.0 39.1 57.0 57.1 5.3 11.2 4.939258 17582 17796 349-370 0.956522 47.9 rps2-rpoC2_p2 rps2-rpoC2 2 ACTCCTGCTTCCATCATCTCT ACATCAGAACAATCATTTCTGGG 21 23 47.6 39.1 58.2 57.1 0.0 11.2 5.147812 17582 17796 304-325 0.956522 47.9 rps2-rpoC2_p3 rps2-rpoC2 3 TGAACTCCTGCTTCCATCATC ACATCAGAACAATCATTTCTGGG 21 23 47.6 39.1 57.7 57.1 0.0 11.2 5.182195 17582 17796 307-328 0.956522 47.8 rps2-rpoC2_p4 rps2-rpoC2 4 TGACCAAAATGAACTCCTGCT ACATCAGAACAATCATTTCTGGG 21 23 42.9 39.1 57.8 57.1 0.0 11.2 5.137809 17582 17796 316-337 0.956522 47.7 rps2-rpoC2_p5 rps2-rpoC2 5 GGTGCCATTCTAGGATTCCA CATCAGAACAATCATTTCTGGGA 20 23 50.0 39.1 57.0 56.8 5.3 11.2 5.192858 17582 17796 348-369 0.956522 47.4 trnT-GGU-psbD_p1 trnT-GGU-psbD 1 GTGGTAGAGTAACGCCATGG GGACCAGCCTACAAAAACGA 20 20 55.0 50.0 58.1 58.1 7.6 0.0 0.177181 33768 34974 1269-1429 1.000000 89.4 trnT-GGU-psbD_p2 trnT-GGU-psbD 2 TCAGTGGTAGAGTAACGCCA GGACCAGCCTACAAAAACGA 20 20 50.0 50.0 58.1 58.1 0.0 0.0 0.199336 33768 34974 1272-1432 1.000000 89.2 trnT-GGU-psbD_p3 trnT-GGU-psbD 3 GTGGTAGAGTAACGCCATGG ACAAAAACGAAACGGTCCCT 20 20 55.0 45.0 58.1 58.2 7.6 0.0 0.310137 33768 34974 1259-1419 1.000000 88.4 trnT-GGU-psbD_p4 trnT-GGU-psbD 4 TCAGTGGTAGAGTAACGCCA ACAAAAACGAAACGGTCCCT 20 20 50.0 45.0 58.1 58.2 0.0 0.0 0.332292 33768 34974 1262-1422 1.000000 88.2 trnT-GGU-psbD_p5 trnT-GGU-psbD 5 GGCGTAAGTCATCGGTTCAA GGACCAGCCTACAAAAACGA 20 20 50.0 50.0 58.3 58.1 0.0 0.0 0.395920 33768 34974 1246-1406 1.000000 87.8 trnF-GAA-ndhJ_p1 trnF-GAA-ndhJ 1 GGGATAGCTCAGCTGGTAGA TGGATAGGATGGCCTTTACG 20 20 55.0 50.0 58.0 56.8 10.3 3.3 1.224095 51519 52241 846-907 1.000000 76.6 trnF-GAA-ndhJ_p2 trnF-GAA-ndhJ 2 GGGATAGCTCAGCTGGTAGA GGATAGGATGGCCTTTACGT 20 20 55.0 50.0 58.0 56.8 10.3 3.3 1.226313 51519 52241 845-906 1.000000 76.6 trnF-GAA-ndhJ_p3 trnF-GAA-ndhJ 3 CCTCGTGTCACCAGTTCAAA TGGATAGGATGGCCTTTACG 20 20 50.0 50.0 58.1 56.8 0.0 3.3 1.273485 51519 52241 810-871 1.000000 76.3 trnF-GAA-ndhJ_p4 trnF-GAA-ndhJ 4 CCTCGTGTCACCAGTTCAAA GGATAGGATGGCCTTTACGT 20 20 50.0 50.0 58.1 56.8 0.0 3.3 1.275704 51519 52241 809-870 1.000000 76.3 trnF-GAA-ndhJ_p5 trnF-GAA-ndhJ 5 GGGATAGCTCAGCTGGTAGA TGAAAGTTGGATAGGATGGCC 20 21 55.0 47.6 58.0 57.7 10.3 0.0 1.299640 51519 52241 853-914 1.000000 76.0 ndhC-trnV-UAC_p1 ndhC-trnV-UAC 1 TGCCCAGAAAATATCATATTCGT GTTCGAGTCCGTATAGCCCT 23 20 34.8 55.0 56.1 58.7 0.0 0.0 5.564602 53928 54647 760-848 1.000000 49.9 ndhC-trnV-UAC_p2 ndhC-trnV-UAC 2 TGCCCAGAAAATATCATATTCGT AGAAGGTCTACGGTTCGAGT 23 20 34.8 50.0 56.1 57.8 0.0 0.0 5.078536 53928 54647 772-860 1.000000 49.8 ndhC-trnV-UAC_p3 ndhC-trnV-UAC 3 TGCCCAGAAAATATCATATTCGT GAAGGTCTACGGTTCGAGTC 23 20 34.8 55.0 56.1 57.5 0.0 0.0 5.422308 53928 54647 771-859 1.000000 49.8 ndhC-trnV-UAC_p4 ndhC-trnV-UAC 4 TGCCAAAATAGGAATAACACTTGA AGAAGGTCTACGGTTCGAGT 24 20 33.3 50.0 56.8 57.8 0.0 0.0 5.352136 53928 54647 808-896 1.000000 49.5 ndhC-trnV-UAC_p5 ndhC-trnV-UAC 5 TGCCAAAATAGGAATAACACTTGAG AGAAGGTCTACGGTTCGAGT 25 20 36.0 50.0 57.8 57.8 0.0 0.0 5.354159 53928 54647 808-896 1.000000 49.5 psbE-petL_p1 psbE-petL 1 AGAACGTTCTCCTGTGCTTC AGCTGCTAGTAGAAAACCGA 20 20 50.0 45.0 57.8 56.3 24.9 12.5 1.868337 67774 69163 1409-1466 1.000000 74.3 psbE-petL_p2 psbE-petL 2 GTTCTCCTGTGCTTCCAGAC AGCTGCTAGTAGAAAACCGA 20 20 55.0 45.0 58.2 56.3 0.9 12.5 1.909925 67774 69163 1404-1461 1.000000 74.0 psbE-petL_p3 psbE-petL 3 ACGAATAACCAACCCGCAAT AGCTGCTAGTAGAAAACCGA 20 20 45.0 45.0 58.2 56.3 0.0 12.5 1.883014 67774 69163 1495-1552 1.000000 73.9 psbE-petL_p4 psbE-petL 4 TGCTGACGAATAACCAACCC AGCTGCTAGTAGAAAACCGA 20 20 50.0 45.0 58.2 56.3 0.0 12.5 1.895919 67774 69163 1500-1557 1.000000 73.8 psbE-petL_p5 psbE-petL 5 CGAATAACCAACCCGCAATG AGCTGCTAGTAGAAAACCGA 20 20 50.0 45.0 57.8 56.3 0.0 12.5 1.899345 67774 69163 1494-1551 1.000000 73.8 trnW-CCA-trnP-UGG_p1 trnW-CCA-trnP-UGG 1 GTTTTGGAGACCCACGTTCT GTCACGGGTTCAAATCCTGT 20 20 50.0 50.0 58.0 58.1 0.0 0.0 0.144618 69736 69904 226-254 1.000000 88.3 trnW-CCA-trnP-UGG_p2 trnW-CCA-trnP-UGG 2 GTTTTGGAGACCCACGTTCT CACGGGTTCAAATCCTGTCA 20 20 50.0 50.0 58.0 58.1 0.0 0.0 0.145952 69736 69904 224-252 1.000000 88.3 trnW-CCA-trnP-UGG_p3 trnW-CCA-trnP-UGG 3 GTTTTGGAGACCCACGTTCT TGTCACGGGTTCAAATCCTG 20 20 50.0 50.0 58.0 58.1 0.0 0.0 0.145952 69736 69904 227-255 1.000000 88.3 trnW-CCA-trnP-UGG_p4 trnW-CCA-trnP-UGG 4 GTTTTGGAGACCCACGTTCT GGGTACAAAATGTCACGGGT 20 20 50.0 50.0 58.0 58.1 0.0 0.0 0.136582 69736 69904 237-265 1.000000 88.1 trnW-CCA-trnP-UGG_p5 trnW-CCA-trnP-UGG 5 GTTTTGGAGACCCACGTTCT TGGGTACAAAATGTCACGGG 20 20 50.0 50.0 58.0 58.1 0.0 0.0 0.137926 69736 69904 238-266 1.000000 88.1 ndhF-rpl32_p1 ndhF-rpl32 1 CCCCACGCGATTAGTTACAA TGCTGCCCAATATCCTTTCC 20 20 50.0 50.0 58.0 57.9 15.9 0.0 0.084714 116289 117414 1615-1795 1.000000 88.7 ndhF-rpl32_p2 ndhF-rpl32 2 TTTTTGACAAGCATTCGCCG TGCTGCCCAATATCCTTTCC 20 20 45.0 50.0 58.2 57.9 0.0 0.0 0.306927 116289 117414 1591-1771 1.000000 87.0 ndhF-rpl32_p3 ndhF-rpl32 3 GATTTAGCAACTGCACCAGC TGCTGCCCAATATCCTTTCC 20 20 50.0 50.0 57.7 57.9 4.2 0.0 0.340508 116289 117414 1782-1962 1.000000 86.5 ndhF-rpl32_p4 ndhF-rpl32 4 CCCCACGCGATTAGTTACAA GAAATCGTGTGCTTGCGTTT 20 20 50.0 45.0 58.0 58.2 15.9 0.0 0.258981 116289 117414 2036-2228 0.782609 79.2 ndhF-rpl32_p5 ndhF-rpl32 5 CCCCACGCGATTAGTTACAA AAAAGCTTTCAATGCTGCCC 20 20 50.0 45.0 58.0 57.8 15.9 13.1 0.187300 116289 117414 1627-1777 0.347826 60.1 rpl32-trnL-UAG_p1 rpl32-trnL-UAG 1 AGGGAAATCTCTTTCTACGAAGA AGCGTGTCTACCGATTTCAC 23 20 39.1 50.0 56.7 58.0 0.0 0.0 4.268717 117574 118672 1169-1421 1.000000 57.9 rpl32-trnL-UAG_p2 rpl32-trnL-UAG 2 AGGGAAATCTCTTTCTACGAAGA CAGCGTGTCTACCGATTTCA 23 20 39.1 50.0 56.7 58.0 0.0 0.0 4.270087 117574 118672 1170-1422 1.000000 57.8 rpl32-trnL-UAG_p3 rpl32-trnL-UAG 3 AGGGAAATCTCTTTCTACGAAGA TCGAACCGAGATGCTTTAGC 23 20 39.1 50.0 56.7 58.1 0.0 0.0 4.338316 117574 118672 1205-1457 1.000000 57.3 rpl32-trnL-UAG_p4 rpl32-trnL-UAG 4 AGGGAAATCTCTTTCTACGAAGA TCCTAAGAGCAGCGTGTCTA 23 20 39.1 50.0 56.7 57.9 0.0 0.0 4.385164 117574 118672 1179-1431 1.000000 56.9 rpl32-trnL-UAG_p5 rpl32-trnL-UAG 5 GCATTGAAAGCTTTTTCATTAGGG AGCGTGTCTACCGATTTCAC 24 20 37.5 50.0 57.6 58.0 14.0 0.0 4.420848 117574 118672 1189-1441 0.913043 51.3 ndhA_p1 ndhA 1 TGACCATAATTCATGAACCCAGT GCCCGCCAGGTTTTATCAAT 23 20 39.1 50.0 57.8 58.9 11.1 0.0 4.080450 124200 126754 2769-2932 1.000000 55.4 ndhA_p2 ndhA 2 TGACCATAATTCATGAACCCAGT GCCCGCCAGGTTTTATCAA 23 19 39.1 52.6 57.8 58.4 11.1 0.0 4.617807 124200 126754 2769-2932 1.000000 51.1 ndhA_p3 ndhA 3 TGACCATAATTCATGAACCCAGT TGGGAGAAGTTGATCGTTGA 23 20 39.1 45.0 57.8 56.5 11.1 0.0 4.704332 124200 126754 2670-2833 1.000000 50.5 ndhA_p4 ndhA 4 TGACCATAATTCATGAACCCAG GCCCGCCAGGTTTTATCAAT 22 20 40.9 50.0 56.1 58.9 11.1 0.0 4.768194 124200 126754 2769-2932 1.000000 49.9 ndhA_p5 ndhA 5 GACCATAATTCATGAACCCAGT GCCCGCCAGGTTTTATCAAT 22 20 40.9 50.0 56.1 58.9 11.1 0.0 4.770616 124200 126754 2768-2931 1.000000 49.9 rpl2_p1 rpl2 1 CGCTTCAACCGGGTTATTCT TTTTAGTGAACGTGGCACAA 20 20 50.0 40.0 58.3 56.1 13.0 19.1 2.146558 157543 159052 1676-1698 1.000000 63.3 rpl2_p2 rpl2 2 CGCTTCAACCGGGTTATTCT TTTTTAGTGAACGTGGCACA 20 20 50.0 40.0 58.3 56.1 13.0 19.1 2.146558 157543 159052 1677-1699 1.000000 63.3 rpl2_p3 rpl2 3 ATCATTACGCTTCAACCGGG TTTTAGTGAACGTGGCACAA 20 20 50.0 40.0 58.3 56.1 6.3 19.1 2.217026 157543 159052 1683-1705 1.000000 62.7 rpl2_p4 rpl2 4 ATCATTACGCTTCAACCGGG TTTTTAGTGAACGTGGCACA 20 20 50.0 40.0 58.3 56.1 6.3 19.1 2.217026 157543 159052 1684-1706 1.000000 62.7 rpl2_p5 rpl2 5 CGCTTCAACCGGGTTATTCT AGTGAACGTGGCACAATAAA 20 20 50.0 40.0 58.3 55.9 13.0 19.1 2.376746 157543 159052 1672-1694 1.000000 61.4