feature_id feature_type parent_gene label_name start end strand length_bp region pi variable_sites indel_sites conserved_left_bp conserved_right_bp primer_available species_resolution unique_haplotype_count species_specific_haplotype_ratio interspecific_divergence alignment_reliability markerseek_score psbA gene psbA psbA 172 1239 -1 1068 LSC 0.010300 11 0 25 114 no 1.000000 2 1.000000 NA 1.000000 51.500000 IGS_001 igs psbA|trnK-UUU psbA-trnK-UUU 1240 1528 0 289 LSC 0.031469 9 3 300 54 no 1.000000 2 1.000000 NA 0.989619 60.600000 trnK-UUU_part2 tRNA trnK-UUU trnK-UUU 1529 1563 -1 35 LSC 0.000000 0 0 4 19 no 0.000000 1 0.000000 NA 1.000000 19.100000 matK gene matK matK 1866 3413 -1 1548 LSC 0.010982 17 0 18 167 no 1.000000 2 1.000000 NA 1.000000 51.300000 IGS_004 igs matK|trnK-UUU matK-trnK-UUU 3414 4401 0 988 LSC 0.021605 21 16 129 74 no 1.000000 2 1.000000 NA 0.983806 63.200000 trnK-UUU_part1 tRNA trnK-UUU trnK-UUU 4402 4438 -1 37 LSC 0.000000 0 0 142 37 no 0.000000 1 0.000000 NA 1.000000 21.500000 IGS_005 igs trnK-UUU|rps16 trnK-UUU-rps16 4439 4862 0 424 LSC 0.030879 13 3 179 60 no 1.000000 2 1.000000 NA 0.992925 63.000000 rps16 gene rps16 rps16 4863 6056 -1 1194 LSC 0.021295 25 20 45 43 yes 1.000000 2 1.000000 NA 0.983250 60.800000 IGS_006 igs rps16|trnQ-UUG rps16-trnQ-UUG 6057 6804 0 748 LSC 0.033661 24 35 300 147 yes 1.000000 2 1.000000 NA 0.953209 78.500000 trnQ-UUG tRNA trnQ-UUG trnQ-UUG 6805 6876 -1 72 LSC 0.000000 0 0 12 75 no 0.000000 1 0.000000 NA 1.000000 19.700000 IGS_007 igs trnQ-UUG|psbK trnQ-UUG-psbK 6877 7244 0 368 LSC 0.021798 8 1 84 12 no 1.000000 2 1.000000 NA 0.997283 52.600000 psbK gene psbK psbK 7245 7430 1 186 LSC 0.010753 2 0 26 135 no 1.000000 2 1.000000 NA 1.000000 45.600000 IGS_008 igs psbK|psbI psbK-psbI 7431 7791 0 361 LSC 0.011236 4 5 81 86 no 1.000000 2 1.000000 NA 0.986150 52.600000 psbI gene psbI psbI 7792 7908 1 117 LSC 0.008547 1 0 83 55 no 1.000000 2 1.000000 NA 1.000000 46.500000 IGS_009 igs psbI|trnS-GCU psbI-trnS-GCU 7909 8077 0 169 LSC 0.061728 10 7 30 108 yes 1.000000 2 1.000000 NA 0.958580 73.700000 trnS-GCU tRNA trnS-GCU trnS-GCU 8078 8165 -1 88 LSC 0.000000 0 0 84 20 no 0.000000 1 0.000000 NA 1.000000 20.200000 IGS_010 igs trnS-GCU|trnG-UCC trnS-GCU-trnG-UCC 8166 9010 0 845 LSC 0.030157 25 16 172 300 yes 1.000000 2 1.000000 NA 0.981065 75.800000 trnG-UCC_part1 tRNA trnG-UCC trnG-UCC 9011 9033 1 23 LSC 0.000000 0 0 33 300 no 0.000000 1 0.000000 NA 1.000000 21.200000 trnG-UCC_part2 tRNA trnG-UCC trnG-UCC 9724 9771 1 48 LSC 0.000000 0 0 300 53 no 0.000000 1 0.000000 NA 1.000000 22.700000 IGS_013 igs trnG-UCC|trnR-UCU trnG-UCC-trnR-UCU 9772 9846 0 75 LSC 0.013333 1 0 300 158 no 1.000000 2 1.000000 NA 1.000000 57.000000 trnR-UCU tRNA trnR-UCU trnR-UCU 9847 9918 1 72 LSC 0.000000 0 0 21 86 no 0.000000 1 0.000000 NA 1.000000 20.300000 IGS_014 igs trnR-UCU|atpA trnR-UCU-atpA 9919 10090 0 172 LSC 0.005814 1 0 93 20 no 1.000000 2 1.000000 NA 1.000000 42.300000 atpA gene atpA atpA 10091 11614 -1 1524 LSC 0.007218 11 0 85 80 no 1.000000 2 1.000000 NA 1.000000 53.900000 IGS_015 igs atpA|atpF atpA-atpF 11615 11684 0 70 LSC 0.000000 0 0 218 10 no 0.000000 1 0.000000 NA 1.000000 19.500000 atpF gene atpF atpF 11685 13211 -1 1527 LSC 0.013132 20 4 288 68 no 1.000000 2 1.000000 NA 0.997380 56.600000 IGS_016 igs atpF|atpH atpF-atpH 13212 13368 0 157 LSC 0.013514 2 9 8 265 no 1.000000 2 1.000000 NA 0.942675 50.400000 atpH gene atpH atpH 13369 13614 -1 246 LSC 0.000000 0 0 64 19 no 0.000000 1 0.000000 NA 1.000000 20.200000 IGS_017 igs atpH|atpI atpH-atpI 13615 14259 0 645 LSC 0.017600 11 20 300 216 yes 1.000000 2 1.000000 NA 0.968992 71.800000 atpI gene atpI atpI 14260 15003 -1 744 LSC 0.004032 3 0 6 20 no 1.000000 2 1.000000 NA 1.000000 46.500000 IGS_018 igs atpI|rps2 atpI-rps2 15004 15275 0 272 LSC 0.022556 6 6 54 48 no 1.000000 2 1.000000 NA 0.977941 56.100000 rps2 gene rps2 rps2 15276 15980 -1 705 LSC 0.004255 3 0 66 21 no 1.000000 2 1.000000 NA 1.000000 47.800000 IGS_019 igs rps2|rpoC2 rps2-rpoC2 15981 16213 0 233 LSC 0.017778 4 8 300 43 no 1.000000 2 1.000000 NA 0.965665 54.200000 rpoC2 gene rpoC2 rpoC2 16214 20374 -1 4161 LSC 0.008652 36 0 41 217 no 1.000000 2 1.000000 NA 1.000000 46.900000 IGS_020 igs rpoC2|rpoC1 rpoC2-rpoC1 20375 20592 0 218 LSC 0.004587 1 0 113 30 no 1.000000 2 1.000000 NA 1.000000 42.400000 rpoC1 gene rpoC1 rpoC1 20593 23510 -1 2918 LSC 0.010359 30 22 0 300 no 1.000000 2 1.000000 NA 0.992461 47.500000 IGS_021 igs rpoC1|rpoB rpoC1-rpoB 23511 23549 0 39 LSC 0.000000 0 0 194 300 no 0.000000 1 0.000000 NA 1.000000 33.300000 rpoB gene rpoB rpoB 23550 26771 -1 3222 LSC 0.004655 15 0 233 300 no 1.000000 2 1.000000 NA 1.000000 58.000000 IGS_022 igs rpoB|trnC-GCA rpoB-trnC-GCA 26772 28033 0 1262 LSC 0.013468 16 74 5 115 no 1.000000 2 1.000000 NA 0.941363 56.400000 trnC-GCA tRNA trnC-GCA trnC-GCA 28034 28104 1 71 LSC 0.000000 0 0 47 44 no 0.000000 1 0.000000 NA 1.000000 22.100000 IGS_023 igs trnC-GCA|petN trnC-GCA-petN 28105 28525 0 421 LSC 0.007126 3 0 118 102 no 1.000000 2 1.000000 NA 1.000000 51.800000 petN gene petN petN 28526 28615 1 90 LSC 0.000000 0 0 219 12 no 0.000000 1 0.000000 NA 1.000000 19.700000 IGS_024 igs petN|psbM petN-psbM 28616 29426 0 811 LSC 0.020000 16 11 300 247 yes 1.000000 2 1.000000 NA 0.986436 71.500000 psbM gene psbM psbM 29427 29531 -1 105 LSC 0.000000 0 0 28 142 no 0.000000 1 0.000000 NA 1.000000 20.900000 IGS_025 igs psbM|trnD-GUC psbM-trnD-GUC 29532 30161 0 630 LSC 0.012841 8 7 133 81 no 1.000000 2 1.000000 NA 0.988889 58.300000 trnD-GUC tRNA trnD-GUC trnD-GUC 30162 30235 -1 74 LSC 0.000000 0 0 81 7 no 0.000000 1 0.000000 NA 1.000000 19.300000 IGS_026 igs trnD-GUC|trnY-GUA trnD-GUC-trnY-GUA 30236 30581 0 346 LSC 0.020588 7 6 155 88 no 1.000000 2 1.000000 NA 0.982659 58.500000 trnY-GUA tRNA trnY-GUA trnY-GUA 30582 30665 -1 84 LSC 0.000000 0 0 46 4 no 0.000000 1 0.000000 NA 1.000000 19.100000 IGS_027 igs trnY-GUA|trnE-UUC trnY-GUA-trnE-UUC 30666 30716 0 51 LSC 0.020000 1 1 130 123 no 1.000000 2 1.000000 NA 0.980392 60.100000 trnE-UUC tRNA trnE-UUC trnE-UUC 30717 30789 -1 73 LSC 0.000000 0 0 46 50 no 0.000000 1 0.000000 NA 1.000000 22.200000 IGS_028 igs trnE-UUC|trnT-GGU trnE-UUC-trnT-GGU 30790 31652 0 863 LSC 0.025641 21 44 119 4 yes 1.000000 2 1.000000 NA 0.949015 63.400000 trnT-GGU tRNA trnT-GGU trnT-GGU 31653 31724 1 72 LSC 0.013889 1 0 15 42 no 1.000000 2 1.000000 NA 1.000000 46.600000 IGS_029 igs trnT-GGU|psbD trnT-GGU-psbD 31725 32699 0 975 LSC 0.021762 21 10 67 300 no 1.000000 2 1.000000 NA 0.989744 62.300000 psbD gene psbD psbD 32700 33761 1 1062 LSC 0.003766 4 0 95 162 no 1.000000 2 1.000000 NA 1.000000 53.000000 psbC gene psbC psbC 33727 35130 1 1404 LSC 0.002137 3 0 148 16 no 1.000000 2 1.000000 NA 1.000000 46.200000 IGS_031 igs psbC|trnS-UGA psbC-trnS-UGA 35131 35266 0 136 LSC 0.037594 5 3 300 129 yes 1.000000 2 1.000000 NA 0.977941 70.800000 trnS-UGA tRNA trnS-UGA trnS-UGA 35267 35359 -1 93 LSC 0.000000 0 0 33 36 no 0.000000 1 0.000000 NA 1.000000 21.200000 IGS_032 igs trnS-UGA|psbZ trnS-UGA-psbZ 35360 35594 0 235 LSC 0.008889 2 10 126 59 no 1.000000 2 1.000000 NA 0.957447 51.100000 psbZ gene psbZ psbZ 35595 35783 1 189 LSC 0.015873 3 0 160 89 no 1.000000 2 1.000000 NA 1.000000 53.300000 IGS_033 igs psbZ|trnG-GCC psbZ-trnG-GCC 35784 36082 0 299 LSC 0.031802 9 16 30 108 no 1.000000 2 1.000000 NA 0.946488 62.600000 trnG-GCC tRNA trnG-GCC trnG-GCC 36083 36153 1 71 LSC 0.000000 0 0 20 37 no 0.000000 1 0.000000 NA 1.000000 20.200000 IGS_034 igs trnG-GCC|trnfM-CAU trnG-GCC-trnfM-CAU 36154 36250 0 97 LSC 0.020619 2 0 91 100 no 1.000000 2 1.000000 NA 1.000000 56.200000 trnfM-CAU tRNA trnfM-CAU trnfM-CAU 36251 36324 -1 74 LSC 0.000000 0 0 4 26 no 0.000000 1 0.000000 NA 1.000000 19.100000 IGS_035 igs trnfM-CAU|rps14 trnfM-CAU-rps14 36325 36498 0 174 LSC 0.020548 3 28 78 264 no 1.000000 2 1.000000 NA 0.839080 56.500000 rps14 gene rps14 rps14 36499 36801 -1 303 LSC 0.003300 1 0 30 7 no 1.000000 2 1.000000 NA 1.000000 40.000000 IGS_036 igs rps14|psaB rps14-psaB 36802 36965 0 164 LSC 0.012195 2 0 38 42 no 1.000000 2 1.000000 NA 1.000000 47.400000 psaB gene psaB psaB 36966 39170 -1 2205 LSC 0.004989 11 0 110 160 no 1.000000 2 1.000000 NA 1.000000 53.400000 IGS_037 igs psaB|psaA psaB-psaA 39171 39197 0 27 LSC 0.000000 0 0 300 133 no 0.000000 1 0.000000 NA 1.000000 28.700000 psaA gene psaA psaA 39198 41450 -1 2253 LSC 0.002663 6 0 300 47 no 1.000000 2 1.000000 NA 1.000000 47.200000 IGS_038 igs psaA|pafI psaA-pafI 41451 42079 0 629 LSC 0.015898 10 0 300 252 no 1.000000 2 1.000000 NA 1.000000 67.900000 pafI gene pafI pafI 42080 44127 -1 2048 LSC 0.011341 23 20 221 34 no 1.000000 2 1.000000 NA 0.990234 52.600000 IGS_039 igs pafI|trnS-GGA pafI-trnS-GGA 44128 44715 0 588 LSC 0.020073 11 40 178 134 no 1.000000 2 1.000000 NA 0.931973 69.300000 trnS-GGA tRNA trnS-GGA trnS-GGA 44716 44802 1 87 LSC 0.000000 0 0 134 47 no 0.000000 1 0.000000 NA 1.000000 22.300000 IGS_040 igs trnS-GGA|rps4 trnS-GGA-rps4 44803 45127 0 325 LSC 0.019531 5 69 221 90 no 1.000000 2 1.000000 NA 0.787692 55.800000 rps4 gene rps4 rps4 45128 45733 -1 606 LSC 0.003300 2 0 155 6 no 1.000000 2 1.000000 NA 1.000000 46.100000 IGS_041 igs rps4|trnT-UGU rps4-trnT-UGU 45734 46092 0 359 LSC 0.013966 5 1 300 81 no 1.000000 2 1.000000 NA 0.997214 53.100000 trnT-UGU tRNA trnT-UGU trnT-UGU 46093 46165 -1 73 LSC 0.000000 0 0 170 8 no 0.000000 1 0.000000 NA 1.000000 19.400000 IGS_042 igs trnT-UGU|trnL-UAA trnT-UGU-trnL-UAA 46166 46731 0 566 LSC 0.019964 11 15 243 136 no 1.000000 2 1.000000 NA 0.973498 67.200000 trnL-UAA_part1 tRNA trnL-UAA trnL-UAA 46732 46766 1 35 LSC 0.000000 0 0 90 101 no 0.000000 1 0.000000 NA 1.000000 25.500000 trnL-UAA_part2 tRNA trnL-UAA trnL-UAA 47304 47353 1 50 LSC 0.000000 0 0 131 40 no 0.000000 1 0.000000 NA 1.000000 21.800000 IGS_045 igs trnL-UAA|trnF-GAA trnL-UAA-trnF-GAA 47354 47635 0 282 LSC 0.025000 7 2 181 110 no 1.000000 2 1.000000 NA 0.992908 60.800000 trnF-GAA tRNA trnF-GAA trnF-GAA 47636 47708 1 73 LSC 0.000000 0 0 10 37 no 0.000000 1 0.000000 NA 1.000000 19.500000 IGS_046 igs trnF-GAA|trnV-UAC trnF-GAA-trnV-UAC 47709 48160 0 452 LSC 0.028302 12 28 83 76 no 1.000000 2 1.000000 NA 0.938053 66.900000 trnV-UAC_part2 tRNA trnV-UAC trnV-UAC 48161 48195 -1 35 LSC 0.000000 0 0 68 41 no 0.000000 1 0.000000 NA 1.000000 21.800000 trnV-UAC_part1 tRNA trnV-UAC trnV-UAC 48801 48839 -1 39 LSC 0.000000 0 0 300 17 no 0.000000 1 0.000000 NA 1.000000 20.000000 IGS_049 igs trnV-UAC|trnM-CAU trnV-UAC-trnM-CAU 48840 49022 0 183 LSC 0.011236 2 5 300 89 no 1.000000 2 1.000000 NA 0.972678 53.200000 trnM-CAU tRNA trnM-CAU trnM-CAU 49023 49095 1 73 LSC 0.000000 0 0 69 16 no 0.000000 1 0.000000 NA 1.000000 20.000000 IGS_050 igs trnM-CAU|atpE trnM-CAU-atpE 49096 49270 0 175 LSC 0.062857 11 0 142 50 yes 1.000000 2 1.000000 NA 1.000000 71.600000 atpE gene atpE atpE 49271 49675 -1 405 LSC 0.007407 3 0 33 90 no 1.000000 2 1.000000 NA 1.000000 46.400000 atpB gene atpB atpB 49672 51168 -1 1497 LSC 0.007348 11 0 47 9 no 1.000000 2 1.000000 NA 1.000000 48.700000 IGS_052 igs atpB|rbcL atpB-rbcL 51169 52022 0 854 LSC 0.024361 20 33 2 182 yes 1.000000 2 1.000000 NA 0.961358 61.500000 rbcL gene rbcL rbcL 52023 53462 1 1440 LSC 0.002778 4 0 69 2 no 1.000000 2 1.000000 NA 1.000000 45.500000 IGS_053 igs rbcL|accD rbcL-accD 53463 54061 0 599 LSC 0.019157 10 77 16 172 no 1.000000 2 1.000000 NA 0.871452 58.300000 accD gene accD accD 54062 55546 1 1485 LSC 0.012795 19 0 18 97 no 1.000000 2 1.000000 NA 1.000000 52.500000 IGS_054 igs accD|psaI accD-psaI 55547 56317 0 771 LSC 0.027027 19 68 5 35 yes 1.000000 2 1.000000 NA 0.911803 63.100000 psaI gene psaI psaI 56318 56428 1 111 LSC 0.018018 2 0 22 74 no 1.000000 2 1.000000 NA 1.000000 49.500000 IGS_055 igs psaI|pafII psaI-pafII 56429 56791 0 363 LSC 0.016529 6 0 68 84 no 1.000000 2 1.000000 NA 1.000000 53.400000 pafII gene pafII pafII 56792 57346 1 555 LSC 0.005405 3 0 53 36 no 1.000000 2 1.000000 NA 1.000000 48.600000 IGS_056 igs pafII|cemA pafII-cemA 57347 58566 0 1220 LSC 0.012552 15 25 291 230 no 1.000000 2 1.000000 NA 0.979508 67.900000 cemA gene cemA cemA 58567 58713 1 147 LSC 0.000000 0 0 0 83 no 0.000000 1 0.000000 NA 1.000000 18.800000 IGS_057 igs cemA|petA cemA-petA 58714 58969 0 256 LSC 0.012397 3 14 147 300 no 1.000000 2 1.000000 NA 0.945312 60.300000 petA gene petA petA 58970 59932 1 963 LSC 0.003115 3 0 106 32 no 1.000000 2 1.000000 NA 1.000000 47.900000 IGS_058 igs petA|psbJ petA-psbJ 59933 60873 0 941 LSC 0.026882 25 11 300 21 yes 1.000000 2 1.000000 NA 0.988310 61.900000 psbJ gene psbJ psbJ 60874 60996 -1 123 LSC 0.008130 1 0 109 25 no 1.000000 2 1.000000 NA 1.000000 44.000000 IGS_059 igs psbJ|psbL psbJ-psbL 60997 61123 0 127 LSC 0.015748 2 0 101 130 no 1.000000 2 1.000000 NA 1.000000 54.100000 psbL gene psbL psbL 61124 61240 -1 117 LSC 0.000000 0 0 28 13 no 0.000000 1 0.000000 NA 1.000000 19.700000 IGS_060 igs psbL|psbF psbL-psbF 61241 61262 0 22 LSC 0.045455 1 0 145 96 yes 1.000000 2 1.000000 NA 1.000000 70.800000 psbF gene psbF psbF 61263 61382 -1 120 LSC 0.008333 1 0 8 300 no 1.000000 2 1.000000 NA 1.000000 42.900000 IGS_061 igs psbF|psbE psbF-psbE 61383 61392 0 10 LSC 0.000000 0 0 23 300 no 0.000000 1 0.000000 NA 1.000000 20.500000 psbE gene psbE psbE 61393 61644 -1 252 LSC 0.000000 0 0 33 48 no 0.000000 1 0.000000 NA 1.000000 21.200000 IGS_062 igs psbE|petL psbE-petL 61645 62766 0 1122 LSC 0.021024 23 28 285 152 yes 1.000000 2 1.000000 NA 0.975045 69.600000 petL gene petL petL 62767 62862 1 96 LSC 0.000000 0 0 38 56 no 0.000000 1 0.000000 NA 1.000000 21.600000 IGS_063 igs petL|petG petL-petG 62863 63039 0 177 LSC 0.022599 4 0 134 88 no 1.000000 2 1.000000 NA 1.000000 57.100000 petG gene petG petG 63040 63153 1 114 LSC 0.008772 1 0 27 218 no 1.000000 2 1.000000 NA 1.000000 44.600000 IGS_064 igs petG|trnW-CCA petG-trnW-CCA 63154 63274 0 121 LSC 0.000000 0 4 25 97 no 1.000000 2 1.000000 NA 0.966942 42.600000 trnW-CCA tRNA trnW-CCA trnW-CCA 63275 63348 -1 74 LSC 0.000000 0 0 146 23 no 0.000000 1 0.000000 NA 1.000000 20.500000 IGS_065 igs trnW-CCA|trnP-UGG trnW-CCA-trnP-UGG 63349 63589 0 241 LSC 0.025316 6 4 220 117 no 1.000000 2 1.000000 NA 0.983402 62.400000 trnP-UGG tRNA trnP-UGG trnP-UGG 63590 63663 -1 74 LSC 0.000000 0 1 19 43 no 1.000000 2 1.000000 NA 0.986486 40.200000 IGS_066 igs trnP-UGG|psaJ trnP-UGG-psaJ 63664 64059 0 396 LSC 0.010582 4 18 93 5 no 1.000000 2 1.000000 NA 0.954545 50.300000 psaJ gene psaJ psaJ 64060 64197 1 138 LSC 0.007246 1 0 151 95 no 1.000000 2 1.000000 NA 1.000000 48.800000 IGS_067 igs psaJ|rpl33 psaJ-rpl33 64198 64852 0 655 LSC 0.034865 22 24 132 169 yes 1.000000 2 1.000000 NA 0.963359 77.100000 rpl33 gene rpl33 rpl33 64853 65053 1 201 LSC 0.004975 1 0 15 24 no 1.000000 2 1.000000 NA 1.000000 41.500000 IGS_068 igs rpl33|rps18 rpl33-rps18 65054 65261 0 208 LSC 0.024272 5 2 31 10 no 1.000000 2 1.000000 NA 0.990385 53.100000 rps18 gene rps18 rps18 65262 65567 1 306 LSC 0.006536 2 0 35 62 no 1.000000 2 1.000000 NA 1.000000 44.000000 IGS_069 igs rps18|rpl20 rps18-rpl20 65568 65787 0 220 LSC 0.045662 10 1 8 7 no 1.000000 2 1.000000 NA 0.995455 64.700000 rpl20 gene rpl20 rpl20 65788 66144 -1 357 LSC 0.008427 3 1 0 102 no 1.000000 2 1.000000 NA 0.997199 43.800000 IGS_070 igs rpl20|rps12 rpl20-rps12 66145 66947 0 803 LSC 0.010076 8 9 125 114 no 1.000000 2 1.000000 NA 0.988792 59.200000 rps12_part1 gene rps12 rps12 66948 67061 -1 114 LSC 0.000000 0 1 46 0 no 1.000000 2 1.000000 NA 0.991228 38.300000 IGS_071 igs rps12|clpP rps12-clpP 67062 67195 0 134 LSC 0.007463 1 0 160 300 no 1.000000 2 1.000000 NA 1.000000 53.800000 clpP gene clpP clpP 67196 69688 -1 2493 LSC 0.013883 33 116 133 120 yes 1.000000 2 1.000000 NA 0.953470 63.100000 IGS_072 igs clpP|psbB clpP-psbB 69689 70619 0 931 LSC 0.021251 18 84 212 256 yes 1.000000 2 1.000000 NA 0.909774 74.400000 psbB gene psbB psbB 70620 72146 1 1527 LSC 0.006549 10 0 155 27 no 1.000000 2 1.000000 NA 1.000000 49.500000 IGS_073 igs psbB|psbT psbB-psbT 72147 72443 0 297 LSC 0.014184 4 15 47 300 no 1.000000 2 1.000000 NA 0.949495 53.900000 psbT gene psbT psbT 72444 72545 1 102 LSC 0.000000 0 0 207 242 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_074 igs psbT|pbf1 psbT-pbf1 72546 72609 0 64 LSC 0.000000 0 0 300 178 no 0.000000 1 0.000000 NA 1.000000 32.100000 pbf1 gene pbf1 pbf1 72610 72741 -1 132 LSC 0.000000 0 1 300 46 no 1.000000 2 1.000000 NA 0.992424 41.700000 IGS_075 igs pbf1|psbH pbf1-psbH 72742 72849 0 108 LSC 0.009259 1 0 300 272 no 1.000000 2 1.000000 NA 1.000000 57.800000 psbH gene psbH psbH 72850 73071 1 222 LSC 0.000000 0 0 61 50 no 0.000000 1 0.000000 NA 1.000000 22.500000 IGS_076 igs psbH|petB psbH-petB 73072 73240 0 169 LSC 0.017857 3 1 283 95 no 1.000000 2 1.000000 NA 0.994083 55.500000 petB gene petB petB 73241 74604 1 1364 LSC 0.008065 11 0 4 45 no 1.000000 2 1.000000 NA 1.000000 48.700000 IGS_077 igs petB|petD petB-petD 74605 74808 0 204 LSC 0.009901 2 2 135 72 no 1.000000 2 1.000000 NA 0.990196 49.500000 petD gene petD petD 74809 76144 1 1336 LSC 0.013554 18 8 120 51 no 1.000000 2 1.000000 NA 0.994012 55.900000 IGS_078 igs petD|rpoA petD-rpoA 76145 76294 0 150 LSC 0.013333 2 0 158 44 no 1.000000 2 1.000000 NA 1.000000 48.500000 rpoA gene rpoA rpoA 76295 77317 -1 1023 LSC 0.004888 5 0 43 42 no 1.000000 2 1.000000 NA 1.000000 49.700000 IGS_079 igs rpoA|rps11 rpoA-rps11 77318 77409 0 92 LSC 0.010870 1 0 300 166 no 1.000000 2 1.000000 NA 1.000000 56.200000 rps11 gene rps11 rps11 77410 77826 -1 417 LSC 0.004796 2 0 49 83 no 1.000000 2 1.000000 NA 1.000000 46.400000 IGS_080 igs rps11|rpl36 rps11-rpl36 77827 78008 0 182 LSC 0.033898 6 5 61 24 no 1.000000 2 1.000000 NA 0.972527 61.300000 rpl36 gene rpl36 rpl36 78009 78122 -1 114 LSC 0.008772 1 0 29 33 no 1.000000 2 1.000000 NA 1.000000 44.700000 IGS_081 igs rpl36|infA rpl36-infA 78123 78237 0 115 LSC 0.008772 1 1 89 235 no 1.000000 2 1.000000 NA 0.991304 50.100000 infA gene infA infA 78238 78471 -1 234 LSC 0.000000 0 0 81 1 no 0.000000 1 0.000000 NA 1.000000 18.800000 IGS_082 igs infA|rps8 infA-rps8 78472 78529 0 58 LSC 0.051724 3 0 300 57 yes 1.000000 2 1.000000 NA 1.000000 70.700000 rps8 gene rps8 rps8 78530 78925 -1 396 LSC 0.005051 2 0 10 36 no 1.000000 2 1.000000 NA 1.000000 43.200000 IGS_083 igs rps8|rpl14 rps8-rpl14 78926 79156 0 231 LSC 0.051948 12 0 239 99 yes 1.000000 2 1.000000 NA 1.000000 73.900000 rpl14 gene rpl14 rpl14 79157 79525 -1 369 LSC 0.008130 3 0 7 300 no 1.000000 2 1.000000 NA 1.000000 44.100000 IGS_084 igs rpl14|rpl16 rpl14-rpl16 79526 79657 0 132 LSC 0.000000 0 5 153 300 no 1.000000 2 1.000000 NA 0.962121 52.600000 rpl16 gene rpl16 rpl16 79658 81573 -1 1916 LSC 0.032364 59 93 285 17 yes 1.000000 2 1.000000 NA 0.951461 67.300000 IGS_085 igs rpl16|rps3 rpl16-rps3 81574 81674 0 101 LSC 0.010000 1 1 300 17 no 1.000000 2 1.000000 NA 0.990099 45.500000 rps3 gene rps3 rps3 81675 82337 -1 663 LSC 0.006033 4 0 83 75 no 1.000000 2 1.000000 NA 1.000000 52.800000 IGS_086 igs rps3|rpl22 rps3-rpl22 82338 82408 0 71 LSC 0.000000 0 0 183 4 no 0.000000 1 0.000000 NA 1.000000 19.100000 rpl22 gene rpl22 rpl22 82409 82774 -1 366 IRb 0.016393 6 0 254 89 no 1.000000 2 1.000000 NA 1.000000 55.000000 IGS_087 igs rpl22|rps19 rpl22-rps19 82775 82982 0 208 IRb 0.009615 2 0 147 300 no 1.000000 2 1.000000 NA 1.000000 54.100000 rps19 gene rps19 rps19 82983 83261 -1 279 IRb 0.000000 0 0 12 91 no 0.000000 1 0.000000 NA 1.000000 19.700000 IGS_088 igs rps19|trnH-GUG rps19-trnH-GUG 83262 83384 0 123 IRb 0.008130 1 0 291 300 no 1.000000 2 1.000000 NA 1.000000 57.200000 trnH-GUG tRNA trnH-GUG trnH-GUG 83385 83459 1 75 IRb 0.000000 0 0 31 300 no 0.000000 1 0.000000 NA 1.000000 21.100000 IGS_089 igs trnH-GUG|rpl2 trnH-GUG-rpl2 83460 83502 0 43 IRb 0.000000 0 0 106 300 no 0.000000 1 0.000000 NA 1.000000 26.700000 rpl2 gene rpl2 rpl2 83503 84988 -1 1486 IRb 0.002019 3 0 149 300 no 1.000000 2 1.000000 NA 1.000000 56.100000 IGS_090 igs rpl2|rpl23 rpl2-rpl23 84989 85006 0 18 IRb 0.000000 0 0 116 300 no 0.000000 1 0.000000 NA 1.000000 27.400000 rpl23 gene rpl23 rpl23 85007 85288 -1 282 IRb 0.000000 0 0 134 266 no 0.000000 1 0.000000 NA 1.000000 28.800000 IGS_091 igs rpl23|trnI-CAU rpl23-trnI-CAU 85289 85448 0 160 IRb 0.000000 0 0 300 106 no 0.000000 1 0.000000 NA 1.000000 26.700000 trnI-CAU tRNA trnI-CAU trnI-CAU 85449 85522 -1 74 IRb 0.000000 0 0 300 32 no 0.000000 1 0.000000 NA 1.000000 21.100000 IGS_092 igs trnI-CAU|ycf2 trnI-CAU-ycf2 85523 85590 0 68 IRb 0.014706 1 0 300 300 no 1.000000 2 1.000000 NA 1.000000 61.000000 ycf2 gene ycf2 ycf2 85591 92409 1 6819 IRb 0.004693 32 0 35 300 no 1.000000 2 1.000000 NA 1.000000 42.800000 IGS_093 igs ycf2|trnL-CAA ycf2-trnL-CAA 92410 93391 0 982 IRb 0.000000 0 0 3 288 no 0.000000 1 0.000000 NA 1.000000 25.200000 trnL-CAA tRNA trnL-CAA trnL-CAA 93392 93472 -1 81 IRb 0.000000 0 0 300 207 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_094 igs trnL-CAA|rps7 trnL-CAA-rps7 93473 96486 0 3014 IRb 0.006682 20 21 300 199 no 1.000000 2 1.000000 NA 0.993033 60.000000 rps7 gene rps7 rps7 96487 96954 -1 468 IRb 0.004274 2 0 214 300 no 1.000000 2 1.000000 NA 1.000000 58.500000 IGS_095 igs rps7|rps12 rps7-rps12 96955 97012 0 58 IRb 0.000000 0 0 267 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 rps12_part2 gene rps12 rps12 97013 97817 -1 805 IRb 0.000000 0 0 300 257 no 0.000000 1 0.000000 NA 1.000000 40.000000 IGS_096 igs rps12|trnV-GAC rps12-trnV-GAC 97818 99440 0 1623 IRb 0.006782 11 1 300 91 no 1.000000 2 1.000000 NA 0.999384 54.300000 trnV-GAC tRNA trnV-GAC trnV-GAC 99441 99512 1 72 IRb 0.000000 0 0 59 19 no 0.000000 1 0.000000 NA 1.000000 20.200000 IGS_097 igs trnV-GAC|rrn16 trnV-GAC-rrn16 99513 99702 0 190 IRb 0.005263 1 0 131 208 no 1.000000 2 1.000000 NA 1.000000 50.400000 rrn16 rRNA rrn16 rrn16 99703 101195 1 1493 IRb 0.001340 2 0 170 3 no 1.000000 2 1.000000 NA 1.000000 44.700000 IGS_098 igs rrn16|trnI-GAU rrn16-trnI-GAU 101196 101502 0 307 IRb 0.003257 1 0 300 280 no 1.000000 2 1.000000 NA 1.000000 54.500000 trnI-GAU_part1 tRNA trnI-GAU trnI-GAU 101503 101539 1 37 IRb 0.000000 0 0 300 243 no 0.000000 1 0.000000 NA 1.000000 33.800000 trnI-GAU_part2 tRNA trnI-GAU trnI-GAU 102515 102549 1 35 IRb 0.000000 0 0 300 208 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_101 igs trnI-GAU|trnA-UGC trnI-GAU-trnA-UGC 102550 102612 0 63 IRb 0.000000 0 0 300 145 no 0.000000 1 0.000000 NA 1.000000 29.600000 trnA-UGC_part1 tRNA trnA-UGC trnA-UGC 102613 102650 1 38 IRb 0.000000 0 0 300 107 no 0.000000 1 0.000000 NA 1.000000 26.800000 trnA-UGC_part2 tRNA trnA-UGC trnA-UGC 103468 103502 1 35 IRb 0.000000 0 0 238 291 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_104 igs trnA-UGC|rrn23 trnA-UGC-rrn23 103503 103647 0 145 IRb 0.000000 0 0 273 146 no 0.000000 1 0.000000 NA 1.000000 29.700000 rrn23 rRNA rrn23 rrn23 103648 106454 1 2807 IRb 0.000713 2 0 300 264 no 1.000000 2 1.000000 NA 1.000000 56.400000 IGS_105 igs rrn23|rrn4.5 rrn23-rrn4.5 106455 106552 0 98 IRb 0.000000 0 0 300 166 no 0.000000 1 0.000000 NA 1.000000 31.200000 rrn4.5 rRNA rrn4.5 rrn4.5 106553 106655 1 103 IRb 0.000000 0 0 300 63 no 0.000000 1 0.000000 NA 1.000000 23.500000 IGS_106 igs rrn4.5|rrn5 rrn4.5-rrn5 106656 106867 0 212 IRb 0.004717 1 0 300 176 no 1.000000 2 1.000000 NA 1.000000 53.400000 rrn5 rRNA rrn5 rrn5 106868 106988 1 121 IRb 0.000000 0 0 148 55 no 0.000000 1 0.000000 NA 1.000000 22.900000 IGS_107 igs rrn5|trnR-ACG rrn5-trnR-ACG 106989 107237 0 249 IRb 0.008032 2 0 269 123 no 1.000000 2 1.000000 NA 1.000000 51.300000 trnR-ACG tRNA trnR-ACG trnR-ACG 107238 107311 1 74 IRb 0.000000 0 0 63 49 no 0.000000 1 0.000000 NA 1.000000 22.400000 IGS_108 igs trnR-ACG|trnN-GUU trnR-ACG-trnN-GUU 107312 107815 0 504 IRb 0.011905 6 0 137 300 no 1.000000 2 1.000000 NA 1.000000 58.900000 trnN-GUU tRNA trnN-GUU trnN-GUU 107816 107887 -1 72 IRb 0.000000 0 0 68 300 no 0.000000 1 0.000000 NA 1.000000 23.800000 IGS_109 igs trnN-GUU|ycf1 trnN-GUU-ycf1 107888 108220 0 333 IRb 0.000000 0 0 140 196 no 0.000000 1 0.000000 NA 1.000000 29.900000 ycf1 gene ycf1 ycf1 108221 113470 1 5250 IRb 0.004386 23 6 300 45 no 1.000000 2 1.000000 NA 0.998857 43.500000 IGS_110 igs ycf1|rpl32 ycf1-rpl32 113471 113589 0 119 IRb 0.016807 2 0 300 34 no 1.000000 2 1.000000 NA 1.000000 49.700000 rpl32 gene rpl32 rpl32 113590 113763 1 174 IRb 0.005747 1 0 65 218 no 1.000000 2 1.000000 NA 1.000000 45.700000 IGS_111 igs rpl32|trnL-UAG rpl32-trnL-UAG 113764 114449 0 686 IRb 0.008759 6 1 139 106 no 1.000000 2 1.000000 NA 0.998542 56.900000 trnL-UAG tRNA trnL-UAG trnL-UAG 114450 114529 1 80 IRb 0.000000 0 0 43 26 no 0.000000 1 0.000000 NA 1.000000 20.700000 IGS_112 igs trnL-UAG|ccsA trnL-UAG-ccsA 114530 114661 0 132 IRb 0.030303 4 0 123 221 no 1.000000 2 1.000000 NA 1.000000 64.100000 ccsA gene ccsA ccsA 114662 115618 1 957 IRb 0.002090 2 0 19 156 no 1.000000 2 1.000000 NA 1.000000 46.400000 IGS_113 igs ccsA|psaC ccsA-psaC 115619 116346 0 728 IRb 0.009818 7 15 300 18 no 1.000000 2 1.000000 NA 0.979396 52.700000 psaC gene psaC psaC 116347 116592 -1 246 IRb 0.008130 2 0 96 300 no 1.000000 2 1.000000 NA 1.000000 49.400000 IGS_114 igs psaC|rps15 psaC-rps15 116593 117245 0 653 SSC 0.012251 8 0 44 7 no 1.000000 2 1.000000 NA 1.000000 51.300000 rps15 gene rps15 rps15 117246 117524 -1 279 SSC 0.039711 11 2 20 24 yes 1.000000 2 1.000000 NA 0.992832 62.500000 IGS_115 igs rps15|psaC rps15-psaC 117525 117824 0 300 IRa 0.070470 21 2 13 44 yes 1.000000 2 1.000000 NA 0.993333 70.400000 psaC gene psaC psaC 117825 118070 1 246 IRa 0.008130 2 0 186 96 no 1.000000 2 1.000000 NA 1.000000 49.400000 IGS_116 igs psaC|ccsA psaC-ccsA 118071 118798 0 728 IRa 0.009818 7 15 18 300 no 1.000000 2 1.000000 NA 0.979396 52.700000 ccsA gene ccsA ccsA 118799 119755 -1 957 IRa 0.002090 2 0 156 19 no 1.000000 2 1.000000 NA 1.000000 46.400000 IGS_117 igs ccsA|trnL-UAG ccsA-trnL-UAG 119756 119887 0 132 IRa 0.030303 4 0 221 123 no 1.000000 2 1.000000 NA 1.000000 64.100000 trnL-UAG tRNA trnL-UAG trnL-UAG 119888 119967 -1 80 IRa 0.000000 0 0 26 43 no 0.000000 1 0.000000 NA 1.000000 20.700000 IGS_118 igs trnL-UAG|rpl32 trnL-UAG-rpl32 119968 120653 0 686 IRa 0.008759 6 1 106 139 no 1.000000 2 1.000000 NA 0.998542 56.900000 rpl32 gene rpl32 rpl32 120654 120827 -1 174 IRa 0.005747 1 0 218 65 no 1.000000 2 1.000000 NA 1.000000 45.700000 IGS_119 igs rpl32|ycf1 rpl32-ycf1 120828 120946 0 119 IRa 0.016807 2 0 34 300 no 1.000000 2 1.000000 NA 1.000000 49.700000 ycf1 gene ycf1 ycf1 120947 126196 -1 5250 IRa 0.004386 23 6 45 300 no 1.000000 2 1.000000 NA 0.998857 43.500000 IGS_120 igs ycf1|trnN-GUU ycf1-trnN-GUU 126197 126529 0 333 IRa 0.000000 0 0 196 140 no 0.000000 1 0.000000 NA 1.000000 29.900000 trnN-GUU tRNA trnN-GUU trnN-GUU 126530 126601 1 72 IRa 0.000000 0 0 300 68 no 0.000000 1 0.000000 NA 1.000000 23.800000 IGS_121 igs trnN-GUU|trnR-ACG trnN-GUU-trnR-ACG 126602 127105 0 504 IRa 0.011905 6 0 300 137 no 1.000000 2 1.000000 NA 1.000000 58.900000 trnR-ACG tRNA trnR-ACG trnR-ACG 127106 127179 -1 74 IRa 0.000000 0 0 49 63 no 0.000000 1 0.000000 NA 1.000000 22.400000 IGS_122 igs trnR-ACG|rrn5 trnR-ACG-rrn5 127180 127428 0 249 IRa 0.008032 2 0 123 269 no 1.000000 2 1.000000 NA 1.000000 51.300000 rrn5 rRNA rrn5 rrn5 127429 127549 -1 121 IRa 0.000000 0 0 55 148 no 0.000000 1 0.000000 NA 1.000000 22.900000 IGS_123 igs rrn5|rrn4.5 rrn5-rrn4.5 127550 127761 0 212 IRa 0.004717 1 0 176 300 no 1.000000 2 1.000000 NA 1.000000 53.400000 rrn4.5 rRNA rrn4.5 rrn4.5 127762 127864 -1 103 IRa 0.000000 0 0 63 300 no 0.000000 1 0.000000 NA 1.000000 23.500000 IGS_124 igs rrn4.5|rrn23 rrn4.5-rrn23 127865 127962 0 98 IRa 0.000000 0 0 166 300 no 0.000000 1 0.000000 NA 1.000000 31.200000 rrn23 rRNA rrn23 rrn23 127963 130769 -1 2807 IRa 0.000713 2 0 264 300 no 1.000000 2 1.000000 NA 1.000000 56.400000 IGS_125 igs rrn23|trnA-UGC rrn23-trnA-UGC 130770 130914 0 145 IRa 0.000000 0 0 146 273 no 0.000000 1 0.000000 NA 1.000000 29.700000 trnA-UGC_part2 tRNA trnA-UGC trnA-UGC 130915 130949 -1 35 IRa 0.000000 0 0 291 238 no 0.000000 1 0.000000 NA 1.000000 33.800000 trnA-UGC_part1 tRNA trnA-UGC trnA-UGC 131767 131804 -1 38 IRa 0.000000 0 0 107 300 no 0.000000 1 0.000000 NA 1.000000 26.800000 IGS_128 igs trnA-UGC|trnI-GAU trnA-UGC-trnI-GAU 131805 131867 0 63 IRa 0.000000 0 0 145 300 no 0.000000 1 0.000000 NA 1.000000 29.600000 trnI-GAU_part2 tRNA trnI-GAU trnI-GAU 131868 131902 -1 35 IRa 0.000000 0 0 208 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 trnI-GAU_part1 tRNA trnI-GAU trnI-GAU 132878 132914 -1 37 IRa 0.000000 0 0 243 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_131 igs trnI-GAU|rrn16 trnI-GAU-rrn16 132915 133221 0 307 IRa 0.003257 1 0 280 300 no 1.000000 2 1.000000 NA 1.000000 54.500000 rrn16 rRNA rrn16 rrn16 133222 134714 -1 1493 IRa 0.001340 2 0 3 170 no 1.000000 2 1.000000 NA 1.000000 44.700000 IGS_132 igs rrn16|trnV-GAC rrn16-trnV-GAC 134715 134904 0 190 IRa 0.005263 1 0 208 131 no 1.000000 2 1.000000 NA 1.000000 50.400000 trnV-GAC tRNA trnV-GAC trnV-GAC 134905 134976 -1 72 IRa 0.000000 0 0 19 59 no 0.000000 1 0.000000 NA 1.000000 20.200000 IGS_133 igs trnV-GAC|rps12 trnV-GAC-rps12 134977 136599 0 1623 IRa 0.006782 11 1 91 300 no 1.000000 2 1.000000 NA 0.999384 54.300000 rps12_part2 gene rps12 rps12 136600 137404 1 805 IRa 0.000000 0 0 257 300 no 0.000000 1 0.000000 NA 1.000000 40.000000 IGS_134 igs rps12|rps7 rps12-rps7 137405 137462 0 58 IRa 0.000000 0 0 300 267 no 0.000000 1 0.000000 NA 1.000000 33.800000 rps7 gene rps7 rps7 137463 137930 1 468 IRa 0.004274 2 0 300 214 no 1.000000 2 1.000000 NA 1.000000 58.500000 IGS_135 igs rps7|trnL-CAA rps7-trnL-CAA 137931 140944 0 3014 IRa 0.006682 20 21 199 300 no 1.000000 2 1.000000 NA 0.993033 60.000000 trnL-CAA tRNA trnL-CAA trnL-CAA 140945 141025 1 81 IRa 0.000000 0 0 207 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 IGS_136 igs trnL-CAA|ycf2 trnL-CAA-ycf2 141026 142007 0 982 IRa 0.000000 0 0 288 3 no 0.000000 1 0.000000 NA 1.000000 25.200000 ycf2 gene ycf2 ycf2 142008 148826 -1 6819 IRa 0.004693 32 0 300 35 no 1.000000 2 1.000000 NA 1.000000 42.800000 IGS_137 igs ycf2|trnI-CAU ycf2-trnI-CAU 148827 148894 0 68 IRa 0.014706 1 0 300 300 no 1.000000 2 1.000000 NA 1.000000 61.000000 trnI-CAU tRNA trnI-CAU trnI-CAU 148895 148968 1 74 IRa 0.000000 0 0 32 300 no 0.000000 1 0.000000 NA 1.000000 21.100000 IGS_138 igs trnI-CAU|rpl23 trnI-CAU-rpl23 148969 149128 0 160 IRa 0.000000 0 0 106 300 no 0.000000 1 0.000000 NA 1.000000 26.700000 rpl23 gene rpl23 rpl23 149129 149410 1 282 IRa 0.000000 0 0 266 134 no 0.000000 1 0.000000 NA 1.000000 28.800000 IGS_139 igs rpl23|rpl2 rpl23-rpl2 149411 149428 0 18 IRa 0.000000 0 0 300 116 no 0.000000 1 0.000000 NA 1.000000 27.400000 rpl2 gene rpl2 rpl2 149429 150914 1 1486 IRa 0.002019 3 0 300 149 no 1.000000 2 1.000000 NA 1.000000 56.100000 IGS_140 igs rpl2|trnH-GUG rpl2-trnH-GUG 150915 150957 0 43 IRa 0.000000 0 0 300 106 no 0.000000 1 0.000000 NA 1.000000 26.700000 trnH-GUG tRNA trnH-GUG trnH-GUG 150958 151032 -1 75 IRa 0.000000 0 0 300 31 no 0.000000 1 0.000000 NA 1.000000 21.100000 IGS_141 igs trnH-GUG|rps19 trnH-GUG-rps19 151033 151155 0 123 IRa 0.008130 1 0 300 291 no 1.000000 2 1.000000 NA 1.000000 57.200000 rps19 gene rps19 rps19 151156 151434 1 279 IRa 0.000000 0 0 91 12 no 0.000000 1 0.000000 NA 1.000000 19.700000 IGS_142 igs rps19|psbA rps19-psbA 151435 171 0 635 IRa 0.012739 8 7 300 11 no 1.000000 2 1.000000 NA 0.988976 53.000000